RNA–Protein interactions for RNA: ENST00000006015.3

HOXA11-201, Transcript of homeobox A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA11, Length 2,295 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11-201ENST00000006015 RPA4Q13156 261 aa18.61■□□□□ 0.57
HOXA11-201ENST00000006015 EXOSC2Q13868 293 aaKnown RBP18.61■□□□□ 0.57
HOXA11-201ENST00000006015 PLEKHS1Q5SXH7 462 aa18.61■□□□□ 0.57
HOXA11-201ENST00000006015 CD276Q5ZPR3 534 aa18.61■□□□□ 0.57
HOXA11-201ENST00000006015 GPAT4Q86UL3 456 aa18.61■□□□□ 0.57
HOXA11-201ENST00000006015 GPR26Q8NDV2 337 aa18.61■□□□□ 0.57
HOXA11-201ENST00000006015 CIDECQ96AQ7 238 aaPredicted RBP18.61■□□□□ 0.57
HOXA11-201ENST00000006015 VOPP1Q96AW1 172 aa18.61■□□□□ 0.57
HOXA11-201ENST00000006015 PPCDCQ96CD2 204 aa18.61■□□□□ 0.57
HOXA11-201ENST00000006015 CHFRQ96EP1 664 aa18.61■□□□□ 0.57
HOXA11-201ENST00000006015 GHITMQ9H3K2 345 aa18.61■□□□□ 0.57
HOXA11-201ENST00000006015 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.6■□□□□ 0.57
HOXA11-201ENST00000006015 SLC9A3R1O14745 358 aaPredicted RBP18.6■□□□□ 0.57
HOXA11-201ENST00000006015 NCR1O76036 304 aa18.6■□□□□ 0.57
HOXA11-201ENST00000006015 CSTF1Q05048 431 aaKnown RBP18.6■□□□□ 0.57
HOXA11-201ENST00000006015 UBE3AQ05086 875 aa18.6■□□□□ 0.57
HOXA11-201ENST00000006015 ADNP2Q6IQ32 1131 aa18.6■□□□□ 0.57
HOXA11-201ENST00000006015 KIAA1211LQ6NV74 962 aa18.6■□□□□ 0.57
HOXA11-201ENST00000006015 OR11H4Q8NGC9 324 aa18.6■□□□□ 0.57
HOXA11-201ENST00000006015 HGDQ93099 445 aa18.6■□□□□ 0.57
HOXA11-201ENST00000006015 ARHGAP9Q9BRR9 750 aa18.6■□□□□ 0.57
HOXA11-201ENST00000006015 TMEM121BQ9BXQ6 578 aaPredicted RBP18.6■□□□□ 0.57
HOXA11-201ENST00000006015 SLCO1C1Q9NYB5 712 aa18.6■□□□□ 0.57
HOXA11-201ENST00000006015 MBD1Q9UIS9 605 aaPredicted RBP18.6■□□□□ 0.57
HOXA11-201ENST00000006015 CCL26Q9Y258 94 aa18.6■□□□□ 0.57
HOXA11-201ENST00000006015 FURINP09958 794 aa18.6■□□□□ 0.57
HOXA11-201ENST00000006015 ACRP10323 421 aa18.6■□□□□ 0.57
HOXA11-201ENST00000006015 SMIM11AP58511 58 aa18.6■□□□□ 0.57
HOXA11-201ENST00000006015 RAB14P61106 215 aa18.6■□□□□ 0.57
HOXA11-201ENST00000006015 PDE7AQ13946 482 aa18.6■□□□□ 0.57
HOXA11-201ENST00000006015 TCTN3Q6NUS6 607 aa18.6■□□□□ 0.57
HOXA11-201ENST00000006015 UNC5DQ6UXZ4 953 aa18.6■□□□□ 0.57
HOXA11-201ENST00000006015 ADGRD2Q7Z7M1 963 aa18.6■□□□□ 0.57
HOXA11-201ENST00000006015 MARCH9Q86YJ5 346 aa18.6■□□□□ 0.57
HOXA11-201ENST00000006015 NEIL3Q8TAT5 605 aa18.6■□□□□ 0.57
HOXA11-201ENST00000006015 ACOT12Q8WYK0 555 aa18.6■□□□□ 0.57
HOXA11-201ENST00000006015 RNFT2Q96EX2 444 aa18.6■□□□□ 0.57
HOXA11-201ENST00000006015 UBL7Q96S82 380 aaPredicted RBP18.6■□□□□ 0.57
HOXA11-201ENST00000006015 DPCDQ9BVM2 203 aaPredicted RBP18.6■□□□□ 0.57
HOXA11-201ENST00000006015 TNFRSF10DQ9UBN6 386 aa18.6■□□□□ 0.57
HOXA11-201ENST00000006015 EXTL2Q9UBQ6 330 aa18.6■□□□□ 0.57
HOXA11-201ENST00000006015 LSM7Q9UK45 103 aaKnown RBP18.6■□□□□ 0.57
HOXA11-201ENST00000006015 RABL2BQ9UNT1 228 aa18.6■□□□□ 0.57
HOXA11-201ENST00000006015 FKBP7Q9Y680 259 aa18.6■□□□□ 0.57
HOXA11-201ENST00000006015 IGLV3-16A0A075B6K0 115 aa18.59■□□□□ 0.57
HOXA11-201ENST00000006015 LATS1O95835 1130 aa18.59■□□□□ 0.57
HOXA11-201ENST00000006015 FGFBP1Q14512 234 aa18.59■□□□□ 0.57
HOXA11-201ENST00000006015 ARIH2OSQ8N7S6 290 aa18.59■□□□□ 0.57
HOXA11-201ENST00000006015 OR7G3Q8NG95 312 aa18.59■□□□□ 0.57
HOXA11-201ENST00000006015 MRPS31Q92665 395 aaKnown RBP18.59■□□□□ 0.57
HOXA11-201ENST00000006015 FGF11Q92914 225 aa18.59■□□□□ 0.57
HOXA11-201ENST00000006015 RFT1Q96AA3 541 aa18.59■□□□□ 0.57
HOXA11-201ENST00000006015 ZSWIM3Q96MP5 696 aa18.59■□□□□ 0.57
HOXA11-201ENST00000006015 CCDC88CQ9P219 2028 aa18.59■□□□□ 0.57
HOXA11-201ENST00000006015 MYO7AQ13402 2215 aa18.59■□□□□ 0.57
HOXA11-201ENST00000006015 C5orf58C9J3I9 102 aa18.58■□□□□ 0.57
HOXA11-201ENST00000006015 ATP6V1G2-DDX39BF2Z307 99 aa18.58■□□□□ 0.57
HOXA11-201ENST00000006015 PRODHO43272 600 aa18.58■□□□□ 0.57
HOXA11-201ENST00000006015 HLA-DPB1P04440 258 aa18.58■□□□□ 0.57
HOXA11-201ENST00000006015 CSF2RAP15509 400 aa18.58■□□□□ 0.57
HOXA11-201ENST00000006015 OPRD1P41143 372 aa18.58■□□□□ 0.57
HOXA11-201ENST00000006015 COX10Q12887 443 aa18.58■□□□□ 0.57
HOXA11-201ENST00000006015 GINS1Q14691 196 aa18.58■□□□□ 0.57
HOXA11-201ENST00000006015 NDUFA9Q16795 377 aa18.58■□□□□ 0.57
HOXA11-201ENST00000006015 MPPE1Q53F39 396 aa18.58■□□□□ 0.57
HOXA11-201ENST00000006015 ARHGAP15Q53QZ3 475 aa18.58■□□□□ 0.57
HOXA11-201ENST00000006015 CRTC1Q6UUV9 634 aa18.58■□□□□ 0.57
HOXA11-201ENST00000006015 OTUB1Q96FW1 271 aaPredicted RBP18.58■□□□□ 0.57
HOXA11-201ENST00000006015 ZNF578Q96N58 590 aaPredicted RBP18.58■□□□□ 0.57
HOXA11-201ENST00000006015 OR2M2Q96R28 347 aa18.58■□□□□ 0.57
HOXA11-201ENST00000006015 RNF32Q9H0A6 362 aa18.58■□□□□ 0.57
HOXA11-201ENST00000006015 ABCG5Q9H222 651 aa18.58■□□□□ 0.57
HOXA11-201ENST00000006015 CLCA2Q9UQC9 943 aa18.58■□□□□ 0.57
HOXA11-201ENST00000006015 RWDD3Q9Y3V2 267 aa18.58■□□□□ 0.57
HOXA11-201ENST00000006015 TSPAN4O14817 238 aa18.58■□□□□ 0.56
HOXA11-201ENST00000006015 SOCS5O75159 536 aa18.58■□□□□ 0.56
HOXA11-201ENST00000006015 SEMA7AO75326 666 aa18.58■□□□□ 0.56
HOXA11-201ENST00000006015 NME6O75414 186 aaPredicted RBP18.58■□□□□ 0.56
HOXA11-201ENST00000006015 PAHP00439 452 aa18.58■□□□□ 0.56
HOXA11-201ENST00000006015 RPS13P62277 151 aaKnown RBP18.58■□□□□ 0.56
HOXA11-201ENST00000006015 MPEG1Q2M385 716 aa18.58■□□□□ 0.56
HOXA11-201ENST00000006015 ATP13A5Q4VNC0 1218 aa18.58■□□□□ 0.56
HOXA11-201ENST00000006015 GARNL3Q5VVW2 1013 aa18.58■□□□□ 0.56
HOXA11-201ENST00000006015 DEF8Q6ZN54 512 aa18.58■□□□□ 0.56
HOXA11-201ENST00000006015 ZFP41Q8N8Y5 198 aa18.58■□□□□ 0.56
HOXA11-201ENST00000006015 GPR32P1Q8NGA4 272 aa18.58■□□□□ 0.56
HOXA11-201ENST00000006015 TOE1Q96GM8 510 aaKnown RBP18.58■□□□□ 0.56
HOXA11-201ENST00000006015 FUZQ9BT04 418 aa18.58■□□□□ 0.56
HOXA11-201ENST00000006015 SLC46A2Q9BY10 475 aa18.58■□□□□ 0.56
HOXA11-201ENST00000006015 OR51J1Q9H342 316 aa18.58■□□□□ 0.56
HOXA11-201ENST00000006015 HCFC1R1Q9NWW0 138 aa18.58■□□□□ 0.56
HOXA11-201ENST00000006015 TBX21Q9UL17 535 aa18.58■□□□□ 0.56
HOXA11-201ENST00000006015 A8MUA0 341 aa18.57■□□□□ 0.56
HOXA11-201ENST00000006015 CACNB4O00305 520 aaPredicted RBP18.57■□□□□ 0.56
HOXA11-201ENST00000006015 MTRF1O75570 445 aaKnown RBP18.57■□□□□ 0.56
HOXA11-201ENST00000006015 APOL3O95236 402 aa18.57■□□□□ 0.56
HOXA11-201ENST00000006015 HOXD4P09016 255 aaPredicted RBP18.57■□□□□ 0.56
HOXA11-201ENST00000006015 ELK1P19419 428 aa18.57■□□□□ 0.56
HOXA11-201ENST00000006015 CCT3P49368 545 aaKnown RBP18.57■□□□□ 0.56
HOXA11-201ENST00000006015 ZNF81P51508 661 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms