RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Polr1eQ8K202 482 aaKnown RBP8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Padi6Q8K3V4 682 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 SarafQ8R3Q0 334 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Osgin1Q8VC10 478 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Mcrs1Q99L90 462 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ccdc77Q9CZH8 489 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Tssk3Q9D2E1 268 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Q9D8N1 392 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Cpn1Q9JJN5 457 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ndufaf3Q9JKL4 185 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ak1Q9R0Y5 194 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Atp6ap1Q9R1Q9 463 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Abcc4E9Q236 1325 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Aox3G3X982 1335 aa8.56□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Olfr1097A2AVA9 315 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Phf11A6H5X4 337 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gm13285B1AYI3 182 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gm13275B1AYI8 182 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Dscr3O35075 297 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 DgkaO88673 730 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Il1aP01582 270 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 LipcP27656 510 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ndufs6P52503 116 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ap2s1P62743 142 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Nrp1P97333 923 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Bpifa1P97361 278 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Mccc2Q3ULD5 563 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 MyrfQ3UR85 1138 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Q3UTZ3 580 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gpr149Q3UVY1 732 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Mtcp1Q60945 107 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Itga2Q62469 1178 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Olfr1031Q7TR87 336 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Tmem179Q8BHH9 233 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Abraxas1Q8BPZ8 407 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Znf451Q8C0P7 1056 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Fem1abQ8C0T1 654 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 NagsQ8R4H7 527 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Slc22a26Q91WJ2 552 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 PpanQ91YU8 470 aaKnown RBP8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Dyrk3Q922Y0 586 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Xpo6Q924Z6 1125 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Pbx4Q99NE9 378 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Lrrc4Q99PH1 652 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Emc2Q9CRD2 297 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Kcnmb2Q9CZM9 235 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Prl2b1Q9DAZ2 228 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Chst1Q9EQC0 411 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Prg3Q9JL95 222 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Avpr1bQ9WU02 421 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Wif1Q9WUA1 379 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Abhd16aQ9Z1Q2 558 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Chd3B1AR17 2055 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Arfgef1G3X9K3 1846 aaKnown RBP8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Scn10aQ6QIY3 1958 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Hpse2B2RY83 592 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Slco5a1E9PVD9 850 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Mtco2P00405 227 aaKnown RBP8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Pim1P06803 397 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 NadkP58058 439 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Tead3P70210 439 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 MybphP70402 483 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 CenplQ3U3S3 329 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gxylt1Q3UHH8 404 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Prss44Q402U7 372 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Oog4Q4G0C7 502 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Epha5Q60629 876 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Sgo2Q7TSY8 1164 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gpbar1Q80SS6 329 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Scml4Q80VG1 408 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Dlg1Q811D0 905 aaKnown RBP8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Zfp52Q8BJ45 724 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Usp43Q8BUM9 1132 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Rcor2Q8C796 523 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 C330021F23RikQ8C7T0 141 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 EloaQ8CB77 773 aaKnown RBP8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Olfr1453Q8VFX0 307 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Olfr109Q8VG96 314 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Lysmd2Q9D7V2 215 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Actr6Q9D864 396 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gtf2e2Q9D902 292 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Smg9Q9DB90 520 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ing2Q9ESK4 281 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Slc40a1Q9JHI9 570 aa8.55□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gm4869A0A1B0GSG7 984 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gm45783A0A1B0GT48 74 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Gm20721E9Q2U8 318 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 SmgcF6VRN1 385 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Olfr743L7N1Y2 311 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Sema4dO09126 861 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 AmacrO09174 381 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 CpoxP36552 443 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Txnl4aP83877 142 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Hif3aQ0VBL6 662 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Zmym5Q3U2E2 627 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 ClpbQ60649 677 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Orc2Q60862 576 aaKnown RBP8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Zic2Q62520 530 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Olfr1181Q7TR18 311 aa8.54□□□□□ -1.04
Upf3b-201ENSMUST00000076265 Ptpn7Q8BUM3 359 aa8.54□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms