RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Fam46aD3Z5S8 447 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Vmn1r55E9Q8I6 310 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Slc27a6E9Q9W4 619 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Man2b2O54782 1018 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Rgs7O54829 469 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Foxq1O70220 400 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 PnpP23492 289 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Tcea3P23881 347 aaKnown RBP6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Chrm4P32211 479 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Apoc3P33622 99 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Rpl6P47911 296 aaKnown RBP6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Kcnj5P48545 419 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Hnrnpa1P49312 320 aaKnown RBP6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Opn1swP51491 346 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Ica1P97411 478 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Defb23Q30KP0 166 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Scrn3Q3TMH2 418 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Cdkl4Q3TZA2 342 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Cep44Q5HZK1 386 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Ripk1Q60855 656 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Fzd3Q61086 666 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Zswim9Q6DI92 447 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Tas2r13Q7M720 305 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Acat3Q80X81 397 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Fbxo9Q8BK06 437 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Slc15a3Q8BPX9 578 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Palm2Q8BR92 376 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Hcar1Q8C131 343 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 EloaQ8CB77 773 aaKnown RBP6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Slc22a12Q8CFZ5 553 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Fam129bQ8R1F1 749 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 McatQ8R3F5 381 aaKnown RBP6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Ints14Q8R3P6 515 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Rdh10Q8VCH7 341 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Olfr771Q8VFH6 317 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Olfr1417Q8VGJ6 315 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Olfr668Q8VGW3 318 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Cavin3Q91VJ2 260 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Atp5f1Q9CQQ7 256 aaKnown RBP6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Sec23bQ9D662 767 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Lrrc69Q9D9Q0 347 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Chrm3Q9ERZ3 589 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Lmx1aQ9JKU8 382 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Znf207Q9JMD0 495 aaKnown RBP6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Dock8Q8C147 2100 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 A0A1W2P799 418 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Tceal7A3KGA4 98 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Znf382B2RXC5 579 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Pgbd5D3YZI9 523 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Fbxw9F8VPX2 458 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Galnt9G3X942 604 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Rnpepl1G5E872 720 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Olfr171G5E8J1 314 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Gm6401L7N2C0 213 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Rgs5O08850 181 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Sap18O55128 153 aaKnown RBP6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 CtslP06797 334 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Surf2P09926 257 aaKnown RBP6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Zfp28P10078 825 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Timp2P25785 220 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 DctP29812 517 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Tsc22d1P62500 1077 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 DhpsQ3TXU5 369 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Oog2Q7TPX8 476 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Zbtb42Q811H0 420 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 IlvblQ8BU33 632 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Rspry1Q8BVR6 576 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Tctn1Q8BZ64 593 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Znf322Q8BZ89 410 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Fbxl3Q8C4V4 428 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Tmem200aQ8C817 491 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Klf11Q8K1S5 502 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Cd276Q8VE98 316 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Olfr1093Q8VF14 322 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Olfr1346Q8VGH6 313 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Olfr659Q8VGV6 322 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Wdr45bQ9CR39 344 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 CenpvQ9CXS4 252 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Naalad2Q9CZR2 740 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Serpini2Q9JK88 405 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Acsl4Q9QUJ7 711 aa6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 FarsbQ9WUA2 589 aaKnown RBP6.8□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Gm21149A0A0G2JFY7 255 aa6.79□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Cd300ld4A2A7W1 245 aa6.79□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Mup6A2AV72 179 aa6.79□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Spats1A2RRY8 269 aa6.79□□□□□ -1.32
Clrn1-202ENSMUST00000055636 FpgtG5E8F4 590 aa6.79□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Gm3476K7N6V0 257 aa6.79□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Gm3248K7N721 186 aa6.79□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Vmn1r16K7N775 303 aa6.79□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Tssk2O54863 358 aa6.79□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Ca3P16015 260 aa6.79□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Hoxb9P20615 250 aa6.79□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Ppm1bP36993 390 aa6.79□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Mapk1P63085 358 aa6.79□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Nkx3-2P97503 333 aa6.79□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Sox14Q04892 240 aa6.79□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Slc25a51Q5HZI9 298 aa6.79□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Havcr1Q5QNS5 305 aa6.79□□□□□ -1.32
Clrn1-202ENSMUST00000055636 Gdi2Q61598 445 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 31.1 ms