RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Rasgef1bQ8JZL7 473 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Slc16a14Q8K1C7 512 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 SdslQ8R238 329 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Socs7Q8VHQ2 579 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Acer3Q9D099 267 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Cts6Q9ET52 334 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Zfp81B8JJZ7 531 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Grcc10O35127 126 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gpr50O88495 591 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 H2-K1P01901 369 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 PnpP23492 289 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 CskP41241 450 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 GcgP55095 180 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Sox4Q06831 440 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Alg11Q3TZM9 492 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Ptbp3Q8BHD7 523 aaKnown RBP9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr955Q9EQ97 314 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Vmn1r184E9Q2N4 314 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 PrkacaP05132 351 aaKnown RBP9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Atxn1P54254 791 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gabrb3P63080 473 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Ufd1P70362 307 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 UqcrhP99028 89 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Pou4f3Q63955 338 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Crtc1Q68ED7 630 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 PdgfrlQ6PE55 375 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr594Q7TRR4 311 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 IpmkQ7TT16 396 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 PimregQ8BFY7 231 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Clba1Q8BHN9 321 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 H2-Q4Q8HWB2 354 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Vmn1r71Q8VIC0 307 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Q91V76 315 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Wdr83Q9DAJ4 315 aaKnown RBP9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr727A2RTN7 324 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gm11127A7VMS2 374 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gm45692D3Z0A0 150 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Igfbp1P47876 272 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Siah1bQ06985 282 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Vwa2Q70UZ7 791 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr857Q7TRF7 309 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Eri3Q8C460 337 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Mrps23Q8VE22 177 aaKnown RBP9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 EtfdhQ921G7 616 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Cxxc1Q9CWW7 660 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Psg23Q9D2U0 471 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Lin37Q9D8N6 246 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Psg21Q9DAV5 471 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gm43796A0A0J9YV32 372 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gm15155B1B034 138 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Zfp738B8JJX8 793 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr618K7N6B3 318 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Matn3O35701 481 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Man2b2O54782 1018 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 PahP16331 453 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Fosl2P47930 326 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Cntn5P68500 1098 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 AktipQ64362 292 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 PtprjQ64455 1238 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Q8BHB7 409 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Acp6Q8BP40 418 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Fam155aQ8CCS2 467 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Angptl8Q8R1L8 198 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr986Q8VFN6 312 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Xylt2Q9EPL0 865 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Sertad3Q9ERC3 197 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gm4907B1AXB9 411 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gm9008E9PVG0 424 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Vmn2r22E9Q7S8 853 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Zfp758E9QAA1 583 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Cdk2ap1O35207 114 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Dmp1O55188 503 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 P20040 264 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Pcmt1P23506 227 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 GnrhrQ01776 327 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 NarsQ8BP47 559 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Trmt10aQ8C1Z8 328 aaKnown RBP9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr1461Q8VEV7 312 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Camk2gQ923T9 529 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Fam71f2B2RXB0 297 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Kcnj1O88335 372 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 VipP32648 170 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Rab19P35294 217 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Tcf7Q00417 419 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Pgap1Q3UUQ7 922 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Cyp2d40Q6P8N9 338 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 DdnQ80TS7 710 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Ccdc116Q80X53 541 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Peli3Q8BXR6 445 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Arpc5lQ9D898 153 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Prmt1Q9JIF0 371 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Slc30a7Q9JKN1 378 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 ClcnkbQ9WUB6 687 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Mtm1Q9Z2C5 603 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 JunP05627 334 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Alkbh2Q6P6J4 239 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr1318Q7TQW6 320 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Q80Y39 304 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Zadh2Q8BGC4 377 aa9.7□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Slc25a32Q8BMG8 316 aa9.7□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 44.7 ms