RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 GNLYP22749 145 aa24.64■■□□□ 1.54
VEGFA-231ENST00000640499 MPIP34949 423 aa24.64■■□□□ 1.54
VEGFA-231ENST00000640499 NR0B1P51843 470 aaKnown RBP24.64■■□□□ 1.54
VEGFA-231ENST00000640499 NCBP2P52298 156 aaKnown RBP eCLIP24.64■■□□□ 1.54
VEGFA-231ENST00000640499 RNFT1Q5M7Z0 435 aa24.64■■□□□ 1.54
VEGFA-231ENST00000640499 ATG16L1Q676U5 607 aa24.64■■□□□ 1.54
VEGFA-231ENST00000640499 PNPLA5Q7Z6Z6 429 aaPredicted RBP24.64■■□□□ 1.54
VEGFA-231ENST00000640499 SULF2Q8IWU5 870 aa24.64■■□□□ 1.54
VEGFA-231ENST00000640499 TRIM42Q8IWZ5 723 aa24.64■■□□□ 1.54
VEGFA-231ENST00000640499 FAM9CQ8IZT9 166 aa24.64■■□□□ 1.54
VEGFA-231ENST00000640499 SLC15A4Q8N697 577 aa24.64■■□□□ 1.54
VEGFA-231ENST00000640499 TMEM178AQ8NBL3 297 aa24.64■■□□□ 1.54
VEGFA-231ENST00000640499 SLX1AQ9BQ83 275 aa24.64■■□□□ 1.54
VEGFA-231ENST00000640499 ITPAQ9BY32 194 aa24.64■■□□□ 1.54
VEGFA-231ENST00000640499 HPF1Q9NWY4 346 aa24.64■■□□□ 1.54
VEGFA-231ENST00000640499 ATP6V1HQ9UI12 483 aa24.64■■□□□ 1.54
VEGFA-231ENST00000640499 SDHDO14521 159 aa24.63■■□□□ 1.53
VEGFA-231ENST00000640499 PLOD3O60568 738 aa24.63■■□□□ 1.53
VEGFA-231ENST00000640499 FBXO45P0C2W1 286 aa24.63■■□□□ 1.53
VEGFA-231ENST00000640499 FRKP42685 505 aaPredicted RBP24.63■■□□□ 1.53
VEGFA-231ENST00000640499 ASMTP46597 345 aa24.63■■□□□ 1.53
VEGFA-231ENST00000640499 TDGF1P3P51864 188 aa24.63■■□□□ 1.53
VEGFA-231ENST00000640499 MRPL49Q13405 166 aaKnown RBP24.63■■□□□ 1.53
VEGFA-231ENST00000640499 C6orf163Q5TEZ5 329 aa24.63■■□□□ 1.53
VEGFA-231ENST00000640499 OPN5Q6U736 354 aa24.63■■□□□ 1.53
VEGFA-231ENST00000640499 FAM180AQ6UWF9 173 aa24.63■■□□□ 1.53
VEGFA-231ENST00000640499 LARP4Q71RC2 724 aaKnown RBP eCLIP24.63■■□□□ 1.531e-25■□□□□ 10.3
VEGFA-231ENST00000640499 ZNF551Q7Z340 670 aaPredicted RBP24.63■■□□□ 1.53
VEGFA-231ENST00000640499 MAVSQ7Z434 540 aa24.63■■□□□ 1.53
VEGFA-231ENST00000640499 WDR75Q8IWA0 830 aaKnown RBP24.63■■□□□ 1.53
VEGFA-231ENST00000640499 RIMKLAQ8IXN7 391 aa24.63■■□□□ 1.53
VEGFA-231ENST00000640499 KRTCAP2Q8N6L1 136 aa24.63■■□□□ 1.53
VEGFA-231ENST00000640499 BCORP1Q8N888 145 aa24.63■■□□□ 1.53
VEGFA-231ENST00000640499 OR7A2PQ8NGA2 310 aa24.63■■□□□ 1.53
VEGFA-231ENST00000640499 FRMD6Q96NE9 622 aa24.63■■□□□ 1.53
VEGFA-231ENST00000640499 NXF5Q9H1B4 397 aaKnown RBP24.63■■□□□ 1.53
VEGFA-231ENST00000640499 ASIC5Q9NY37 505 aa24.63■■□□□ 1.53
VEGFA-231ENST00000640499 MARCOQ9UEW3 520 aaPredicted RBP24.63■■□□□ 1.53
VEGFA-231ENST00000640499 ERVK-11Q9UQG0 969 aa24.63■■□□□ 1.53
VEGFA-231ENST00000640499 A0A0G2JMM0 328 aa24.62■■□□□ 1.53
VEGFA-231ENST00000640499 A0A1W2PPB8 328 aa24.62■■□□□ 1.53
VEGFA-231ENST00000640499 A0A1W2PRS3 328 aa24.62■■□□□ 1.53
VEGFA-231ENST00000640499 PINLYPA6NC86 204 aa24.62■■□□□ 1.53
VEGFA-231ENST00000640499 KIR3DP1A8MWS1 328 aa24.62■■□□□ 1.53
VEGFA-231ENST00000640499 ZNF195O14628 629 aa24.62■■□□□ 1.53
VEGFA-231ENST00000640499 PRPS2P11908 318 aa24.62■■□□□ 1.53
VEGFA-231ENST00000640499 MAPK1P28482 360 aa24.62■■□□□ 1.53
VEGFA-231ENST00000640499 DIO3P55073 304 aa24.62■■□□□ 1.53
VEGFA-231ENST00000640499 PPP2R2AP63151 447 aa24.62■■□□□ 1.53
VEGFA-231ENST00000640499 SMU1Q2TAY7 513 aa24.62■■□□□ 1.53
VEGFA-231ENST00000640499 PSD4Q8NDX1 1056 aa24.62■■□□□ 1.53
VEGFA-231ENST00000640499 C17orf47Q8NEP4 570 aa24.62■■□□□ 1.53
VEGFA-231ENST00000640499 SLC22A8Q8TCC7 542 aa24.62■■□□□ 1.53
VEGFA-231ENST00000640499 NR4A3Q92570 626 aa24.62■■□□□ 1.53
VEGFA-231ENST00000640499 PPCDCQ96CD2 204 aa24.62■■□□□ 1.53
VEGFA-231ENST00000640499 ERP27Q96DN0 273 aa24.62■■□□□ 1.53
VEGFA-231ENST00000640499 AGPAT4Q9NRZ5 378 aa24.62■■□□□ 1.53
VEGFA-231ENST00000640499 SH3BP4Q9P0V3 963 aa24.62■■□□□ 1.53
VEGFA-231ENST00000640499 MYO18BQ8IUG5 2567 aa24.62■■□□□ 1.53
VEGFA-231ENST00000640499 FLNCQ14315 2725 aa24.62■■□□□ 1.53
VEGFA-231ENST00000640499 PLOD2O00469 737 aa24.61■■□□□ 1.53
VEGFA-231ENST00000640499 SCAMP2O15127 329 aaKnown RBP24.61■■□□□ 1.53
VEGFA-231ENST00000640499 KITP10721 976 aa24.61■■□□□ 1.53
VEGFA-231ENST00000640499 LAMP1P11279 417 aa24.61■■□□□ 1.53
VEGFA-231ENST00000640499 MC3RP41968 323 aa24.61■■□□□ 1.53
VEGFA-231ENST00000640499 TMEM107Q6UX40 140 aa24.61■■□□□ 1.53
VEGFA-231ENST00000640499 RTL4Q6ZR62 310 aa24.61■■□□□ 1.53
VEGFA-231ENST00000640499 KIRREL3Q8IZU9 778 aa24.61■■□□□ 1.53
VEGFA-231ENST00000640499 CPSF7Q8N684 471 aaKnown RBP24.61■■□□□ 1.53
VEGFA-231ENST00000640499 GOLGA6L1Q8N7Z2 621 aa24.61■■□□□ 1.53
VEGFA-231ENST00000640499 DNAJB8Q8NHS0 232 aa24.61■■□□□ 1.53
VEGFA-231ENST00000640499 TMEM125Q96AQ2 219 aa24.61■■□□□ 1.53
VEGFA-231ENST00000640499 MTERF3Q96E29 417 aa24.61■■□□□ 1.53
VEGFA-231ENST00000640499 SPACA9Q96E40 222 aaPredicted RBP24.61■■□□□ 1.53
VEGFA-231ENST00000640499 ELP4Q96EB1 424 aa24.61■■□□□ 1.53
VEGFA-231ENST00000640499 PROK2Q9HC23 129 aa24.61■■□□□ 1.53
VEGFA-231ENST00000640499 OLAHQ9NV23 265 aa24.61■■□□□ 1.53
VEGFA-231ENST00000640499 RP1L1Q8IWN7 2480 aaPredicted RBP24.61■■□□□ 1.53
VEGFA-231ENST00000640499 SVILO95425 2214 aa24.61■■□□□ 1.53
VEGFA-231ENST00000640499 UPK1AO00322 258 aa24.6■■□□□ 1.53
VEGFA-231ENST00000640499 HDAC3O15379 428 aa24.6■■□□□ 1.53
VEGFA-231ENST00000640499 PEX1O43933 1283 aa24.6■■□□□ 1.53
VEGFA-231ENST00000640499 VPS4BO75351 444 aa24.6■■□□□ 1.53
VEGFA-231ENST00000640499 PSMG1O95456 288 aa24.6■■□□□ 1.53
VEGFA-231ENST00000640499 CCL3P10147 92 aa24.6■■□□□ 1.53
VEGFA-231ENST00000640499 EFNA1P20827 205 aaPredicted RBP24.6■■□□□ 1.53
VEGFA-231ENST00000640499 NTSP30990 170 aa24.6■■□□□ 1.53
VEGFA-231ENST00000640499 GPR85P60893 370 aa24.6■■□□□ 1.53
VEGFA-231ENST00000640499 NNATQ16517 81 aa24.6■■□□□ 1.53
VEGFA-231ENST00000640499 GOLM1Q8NBJ4 401 aa24.6■■□□□ 1.53
VEGFA-231ENST00000640499 SGCZQ96LD1 299 aa24.6■■□□□ 1.53
VEGFA-231ENST00000640499 VSTM2LQ96N03 204 aa24.6■■□□□ 1.53
VEGFA-231ENST00000640499 WDR55Q9H6Y2 383 aaPredicted RBP24.6■■□□□ 1.53
VEGFA-231ENST00000640499 TIMMDC1Q9NPL8 285 aa24.6■■□□□ 1.53
VEGFA-231ENST00000640499 VPS4AQ9UN37 437 aa24.6■■□□□ 1.53
VEGFA-231ENST00000640499 EIF3LQ9Y262 564 aaKnown RBP24.6■■□□□ 1.53
VEGFA-231ENST00000640499 GPR55Q9Y2T6 319 aaPredicted RBP24.6■■□□□ 1.53
VEGFA-231ENST00000640499 KLF13Q9Y2Y9 288 aaPredicted RBP24.6■■□□□ 1.53
VEGFA-231ENST00000640499 EXPH5Q8NEV8 1989 aa24.6■■□□□ 1.53
VEGFA-231ENST00000640499 UQCRHLA0A096LP55 91 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms