RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 CCSMST1Q4G0I0 132 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 SLC25A24Q6NUK1 477 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 ZNF613Q6PF04 617 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 SLC9B2Q86UD5 537 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 ACBD7Q8N6N7 88 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 FAM86B1Q8N7N1 296 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 CUEDC1Q9NWM3 386 aaPredicted RBP13.7□□□□□ -0.22
SCARB2-216ENST00000639300 DNMT3BQ9UBC3 853 aaKnown RBP13.7□□□□□ -0.22
SCARB2-216ENST00000639300 TMEM5Q9Y2B1 443 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 PDCD5O14737 125 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 NDUFV2P19404 249 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 ATP5A1P25705 553 aaKnown RBP13.69□□□□□ -0.22
SCARB2-216ENST00000639300 AK4P27144 223 aaPredicted RBP13.69□□□□□ -0.22
SCARB2-216ENST00000639300 ZNF33BQ06732 778 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 MBTPS1Q14703 1052 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 FIGLAQ6QHK4 219 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 PLA2G15Q8NCC3 412 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 SLC37A3Q8NCC5 494 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 CYP17A1P05093 508 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 SBK3P0C264 359 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 PORP16435 677 aaPredicted RBP13.69□□□□□ -0.22
SCARB2-216ENST00000639300 IMPA1P29218 277 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 PPP5CP53041 499 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 HSF2Q03933 536 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 CRYZQ08257 329 aaKnown RBP13.69□□□□□ -0.22
SCARB2-216ENST00000639300 TCEAL5Q5H9L2 206 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 PAMR1Q6UXH9 720 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 USP53Q70EK8 1073 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 CBLL1Q75N03 491 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 RPL3LQ92901 407 aaKnown RBP13.69□□□□□ -0.22
SCARB2-216ENST00000639300 COQ8BQ96D53 544 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 CPPED1Q9BRF8 314 aaPredicted RBP13.69□□□□□ -0.22
SCARB2-216ENST00000639300 PRRG4Q9BZD6 226 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 SMURF1Q9HCE7 757 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 DIABLOQ9NR28 239 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 HCN3Q9P1Z3 774 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 ERVK-11Q9UQG0 969 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 RBM7Q9Y580 266 aaKnown RBP13.69□□□□□ -0.22
SCARB2-216ENST00000639300 NHSQ6T4R5 1651 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 C11orf98E9PRG8 122 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 PCDH17O14917 1159 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 TAPBPO15533 448 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 CFIP05156 583 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 DDCP20711 480 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 PITPNAQ00169 270 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 ZNF627Q7L945 461 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 DRAXINQ8NBI3 349 aaPredicted RBP13.69□□□□□ -0.22
SCARB2-216ENST00000639300 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.69□□□□□ -0.22
SCARB2-216ENST00000639300 TBCCD1Q9NVR7 557 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 HSPB11Q9Y547 144 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 HCRTR2O43614 444 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 LHCGRP22888 699 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 FRMPD2BQ6IN97 320 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 CEACAM19Q7Z692 300 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 CYB561A3Q8NBI2 242 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 ACTL8Q9H568 366 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 SRA1Q9HD15 236 aaKnown RBP13.69□□□□□ -0.22
SCARB2-216ENST00000639300 TMEM184CQ9NVA4 438 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 HCN2Q9UL51 889 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 TUBGCP6Q96RT7 1819 aa13.69□□□□□ -0.22
SCARB2-216ENST00000639300 ZNF879B4DU55 563 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 J3KTA2 159 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 PLD2O14939 933 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 HRH2P25021 359 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 SUOXP51687 545 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 NRG3P56975 720 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 RPA4Q13156 261 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 LEXMQ3ZCV2 418 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 PLBD1Q6P4A8 553 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 SLC29A4Q7RTT9 530 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 JAGN1Q8N5M9 183 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 ACOT4Q8N9L9 421 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 DZANK1Q9NVP4 752 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 PRLHRP49683 370 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 HMBOX1Q6NT76 420 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 PDZD3Q86UT5 571 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 ZBTB8BQ8NAP8 495 aaPredicted RBP13.68□□□□□ -0.22
SCARB2-216ENST00000639300 PSD4Q8NDX1 1056 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 OR9A2Q8NGT5 310 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 ZFP90Q8TF47 636 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 FUZQ9BT04 418 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 SHROOM3Q8TF72 1996 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 SOX1O00570 391 aaPredicted RBP13.68□□□□□ -0.22
SCARB2-216ENST00000639300 OXSR1O95747 527 aaPredicted RBP13.68□□□□□ -0.22
SCARB2-216ENST00000639300 DHPSP49366 369 aaPredicted RBP13.68□□□□□ -0.22
SCARB2-216ENST00000639300 AP2S1P53680 142 aaPredicted RBP13.68□□□□□ -0.22
SCARB2-216ENST00000639300 TAP2Q03519 686 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 SYPL1Q16563 259 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 TBRG1Q3YBR2 411 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 ZC3H14Q6PJT7 736 aaKnown RBP13.68□□□□□ -0.22
SCARB2-216ENST00000639300 ZBTB20Q9HC78 741 aaPredicted RBP13.68□□□□□ -0.22
SCARB2-216ENST00000639300 PAPPAQ13219 1627 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 CABIN1Q9Y6J0 2220 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 ARID1AO14497 2285 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 A0A1B0GTL3 188 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 A0A1B0GTW7 788 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 INMT-MINDY4F8WBC2 141 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 FLRT2O43155 660 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 CD97P48960 835 aa13.68□□□□□ -0.22
SCARB2-216ENST00000639300 CDK3Q00526 305 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms