RNA–Protein interactions for RNA: ENST00000638939.1

PDE4D-229, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-229ENST00000638939 CNOT11Q9UKZ1 510 aaKnown RBP5.04□□□□□ -1.6
PDE4D-229ENST00000638939 ZNF490Q9ULM2 529 aaPredicted RBP5.04□□□□□ -1.6
PDE4D-229ENST00000638939 CHMP2BQ9UQN3 213 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 PPP2R2CQ9Y2T4 447 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 TSC22D4Q9Y3Q8 395 aa5.04□□□□□ -1.6
PDE4D-229ENST00000638939 TUBAL3A6NHL2 446 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 CD8B2A6NJW9 211 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 CLCA1A8K7I4 914 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 FAM171A2A8MVW0 826 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 CAPN14A8MX76 684 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 E7ESA3 106 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 GSTA4O15217 222 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 TAPBPO15533 448 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 TRIM3O75382 744 aaPredicted RBP5.03□□□□□ -1.6
PDE4D-229ENST00000638939 STK16O75716 305 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 SEC31AO94979 1220 aaKnown RBP5.03□□□□□ -1.6
PDE4D-229ENST00000638939 SNX4O95219 450 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 IL18BPO95998 194 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 C1QAP02745 245 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 HPNP05981 417 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 RFPL3SP0C7P2 107 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 ALOX15P16050 662 aaPredicted RBP5.03□□□□□ -1.6
PDE4D-229ENST00000638939 TNNI3P19429 210 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 GDF1P27539 372 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 SERPINB3P29508 390 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 GALNSP34059 522 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 PIGAP37287 484 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 MSH2P43246 934 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 HSPA7P48741 367 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 TMED10P49755 219 aaKnown RBP5.03□□□□□ -1.6
PDE4D-229ENST00000638939 CDK9P50750 372 aaKnown RBP5.03□□□□□ -1.6
PDE4D-229ENST00000638939 NEK2P51955 445 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 ZNF136P52737 540 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 ARL4CP56559 192 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 SLC37A1P57057 533 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 ATP6V0D1P61421 351 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 DCAF7P61962 342 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 DUSP8Q13202 625 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 DOC2AQ14183 400 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 RPS6KA2Q15349 733 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 ZKSCAN8Q15776 578 aaPredicted RBP5.03□□□□□ -1.6
PDE4D-229ENST00000638939 HIST2H2ACQ16777 129 aaPredicted RBP5.03□□□□□ -1.6
PDE4D-229ENST00000638939 C18orf21Q32NC0 220 aaPredicted RBP5.03□□□□□ -1.6
PDE4D-229ENST00000638939 PRAMEF20Q5VT98 475 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 KHDRBS2Q5VWX1 349 aaKnown RBP5.03□□□□□ -1.6
PDE4D-229ENST00000638939 HIST2H2AA3Q6FI13 130 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 SULT1C3Q6IMI6 304 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 MED27Q6P2C8 311 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 RNF111Q6ZNA4 994 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 SLC29A4Q7RTT9 530 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 ZBTB46Q86UZ6 589 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 GPSM1Q86YR5 675 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 KRTAP1-3Q8IUG1 177 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 LRRC8AQ8IWT6 810 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 LAS2Q8IYD9 372 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 ZCCHC7Q8N3Z6 543 aaKnown RBP5.03□□□□□ -1.6
PDE4D-229ENST00000638939 LIX1Q8N485 282 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 ZNF441Q8N8Z8 693 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 SNX31Q8N9S9 440 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 C17orf47Q8NEP4 570 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 TNIP2Q8NFZ5 429 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 ZNF473Q8WTR7 871 aaKnown RBP5.03□□□□□ -1.6
PDE4D-229ENST00000638939 SMPDL3BQ92485 455 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 TANKQ92844 425 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 WDR89Q96FK6 387 aaPredicted RBP5.03□□□□□ -1.6
PDE4D-229ENST00000638939 TSPAN17Q96FV3 270 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 CMTM7Q96FZ5 175 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 SENP5Q96HI0 755 aaPredicted RBP5.03□□□□□ -1.6
PDE4D-229ENST00000638939 C18orf12Q96KH6 178 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 PWWP2AQ96N64 755 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 ZFP3Q96NJ6 502 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 F2RL3Q96RI0 385 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 SECISBP2Q96T21 854 aaKnown RBP5.03□□□□□ -1.6
PDE4D-229ENST00000638939 DDX47Q9H0S4 455 aaKnown RBP5.03□□□□□ -1.6
PDE4D-229ENST00000638939 RPF2Q9H7B2 306 aaKnown RBP5.03□□□□□ -1.6
PDE4D-229ENST00000638939 PLEKHF2Q9H8W4 249 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 GP6Q9HCN6 339 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 SNX15Q9NRS6 342 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 BEX4Q9NWD9 120 aaPredicted RBP5.03□□□□□ -1.6
PDE4D-229ENST00000638939 JKAMPQ9P055 326 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 ADGRE2Q9UHX3 823 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 PTBP2Q9UKA9 531 aaKnown RBP5.03□□□□□ -1.6
PDE4D-229ENST00000638939 SNX12Q9UMY4 172 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 C15orf41Q9Y2V0 281 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 CUBNO60494 3623 aa5.03□□□□□ -1.6
PDE4D-229ENST00000638939 FBN1P35555 2871 aaKnown RBP5.02□□□□□ -1.61
PDE4D-229ENST00000638939 A0A0A6YYD5 115 aa5.02□□□□□ -1.61
PDE4D-229ENST00000638939 C15orf38-AP3S2A0A0A6YYH1 394 aa5.02□□□□□ -1.61
PDE4D-229ENST00000638939 NCF1BA6NI72 391 aaPredicted RBP5.02□□□□□ -1.61
PDE4D-229ENST00000638939 NCF1CA8MVU1 366 aaPredicted RBP5.02□□□□□ -1.61
PDE4D-229ENST00000638939 SHISA8B8ZZ34 492 aa5.02□□□□□ -1.61
PDE4D-229ENST00000638939 HRKO00198 91 aa5.02□□□□□ -1.61
PDE4D-229ENST00000638939 PLPP1O14494 284 aa5.02□□□□□ -1.61
PDE4D-229ENST00000638939 TP53I11O14683 189 aa5.02□□□□□ -1.61
PDE4D-229ENST00000638939 TP73O15350 636 aa5.02□□□□□ -1.61
PDE4D-229ENST00000638939 CDH16O75309 829 aa5.02□□□□□ -1.61
PDE4D-229ENST00000638939 ULK1O75385 1050 aa5.02□□□□□ -1.61
PDE4D-229ENST00000638939 CLPSP04118 112 aa5.02□□□□□ -1.61
PDE4D-229ENST00000638939 HRGP04196 525 aa5.02□□□□□ -1.61
PDE4D-229ENST00000638939 HEXAP06865 529 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms