RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 SPPL2AQ8TCT8 520 aa17.42■□□□□ 0.38
CLN6-221ENST00000637494 ADIPOR1Q96A54 375 aa17.42■□□□□ 0.38
CLN6-221ENST00000637494 HSPBAP1Q96EW2 488 aa17.42■□□□□ 0.38
CLN6-221ENST00000637494 SPOCK3Q9BQ16 436 aa17.42■□□□□ 0.38
CLN6-221ENST00000637494 MID1IP1Q9NPA3 183 aa17.42■□□□□ 0.38
CLN6-221ENST00000637494 ACKR4Q9NPB9 350 aa17.42■□□□□ 0.38
CLN6-221ENST00000637494 KCNJ16Q9NPI9 418 aa17.42■□□□□ 0.38
CLN6-221ENST00000637494 MAT2BQ9NZL9 334 aa17.42■□□□□ 0.38
CLN6-221ENST00000637494 DLGAP4Q9Y2H0 992 aa17.42■□□□□ 0.38
CLN6-221ENST00000637494 C19orf84I3L1E1 186 aa17.41■□□□□ 0.38
CLN6-221ENST00000637494 NAGAP17050 411 aa17.41■□□□□ 0.38
CLN6-221ENST00000637494 NUP107P57740 925 aa17.41■□□□□ 0.38
CLN6-221ENST00000637494 DCAF7P61962 342 aa17.41■□□□□ 0.38
CLN6-221ENST00000637494 SPDYAQ5MJ70 313 aa17.41■□□□□ 0.38
CLN6-221ENST00000637494 FAM111BQ6SJ93 734 aa17.41■□□□□ 0.38
CLN6-221ENST00000637494 ZYG11AQ6WRX3 759 aa17.41■□□□□ 0.38
CLN6-221ENST00000637494 LILRB4Q8NHJ6 448 aa17.41■□□□□ 0.38
CLN6-221ENST00000637494 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.41■□□□□ 0.382e-7■■■■■ 68.1
CLN6-221ENST00000637494 LCORQ96JN0 433 aaPredicted RBP17.41■□□□□ 0.38
CLN6-221ENST00000637494 RILPQ96NA2 401 aa17.41■□□□□ 0.38
CLN6-221ENST00000637494 ACPTQ9BZG2 426 aa17.41■□□□□ 0.38
CLN6-221ENST00000637494 SHCBP1LQ9BZQ2 653 aa17.41■□□□□ 0.38
CLN6-221ENST00000637494 TEX15Q9BXT5 2789 aa17.41■□□□□ 0.38
CLN6-221ENST00000637494 CELSR2Q9HCU4 2923 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 A0A1W2PPM1 405 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 LRRC3CA6NJW4 275 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 FAM90A27PA6NNH2 459 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 COPEO14579 308 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 ACOX3O15254 700 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 PPM1BO75688 479 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 TRAPPC6AO75865 159 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 IL3P08700 152 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 RFPL3SP0C7P2 107 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 S1PR1P21453 382 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 ABCD3P28288 659 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 TIA1P31483 386 aaKnown RBP eCLIP17.4■□□□□ 0.381e-5■■■□□ 19.1
CLN6-221ENST00000637494 KIR3DL1P43629 444 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 BTKQ06187 659 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 PLCXD2Q0VAA5 305 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 EXOSC7Q15024 291 aaKnown RBP17.4■□□□□ 0.38
CLN6-221ENST00000637494 TOMM20Q15388 145 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 ERCC6LQ2NKX8 1250 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 C1orf185Q5T7R7 199 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 CRYBG3Q68DQ2 2970 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 MEX3BQ6ZN04 569 aaKnown RBP17.4■□□□□ 0.38
CLN6-221ENST00000637494 NUP54Q7Z3B4 507 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 PRR22Q8IZ63 422 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 MMP21Q8N119 569 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 ADCY4Q8NFM4 1077 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 NEIL3Q8TAT5 605 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 RDH11Q8TC12 318 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 MZB1Q8WU39 189 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 TTYH2Q9BSA4 534 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 ANGPTL4Q9BY76 406 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 NXF5Q9H1B4 397 aaKnown RBP17.4■□□□□ 0.38
CLN6-221ENST00000637494 EPB41L4BQ9H329 900 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 METTL7AQ9H8H3 244 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 PROK2Q9HC23 129 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 SENP1Q9P0U3 644 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 TNFRSF10DQ9UBN6 386 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 MID2Q9UJV3 735 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 TIMM22Q9Y584 194 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 NOTCH2Q04721 2471 aa17.4■□□□□ 0.38
CLN6-221ENST00000637494 EML6Q6ZMW3 1958 aa17.39■□□□□ 0.37
CLN6-221ENST00000637494 C15orf38-AP3S2A0A0A6YYH1 394 aa17.39■□□□□ 0.37
CLN6-221ENST00000637494 SERTM1A2A2V5 107 aa17.39■□□□□ 0.37
CLN6-221ENST00000637494 SMIM23A6NLE4 172 aa17.39■□□□□ 0.37
CLN6-221ENST00000637494 FOXO6A8MYZ6 492 aa17.39■□□□□ 0.37
CLN6-221ENST00000637494 TRIM3O75382 744 aaPredicted RBP17.39■□□□□ 0.37
CLN6-221ENST00000637494 ANXA4P09525 319 aaPredicted RBP17.39■□□□□ 0.37
CLN6-221ENST00000637494 CHN1P15882 459 aa17.39■□□□□ 0.37
CLN6-221ENST00000637494 GCKP35557 465 aa17.39■□□□□ 0.37
CLN6-221ENST00000637494 CASP3P42574 277 aa17.39■□□□□ 0.37
CLN6-221ENST00000637494 SLCO1A2P46721 670 aa17.39■□□□□ 0.37
CLN6-221ENST00000637494 TRPC1P48995 793 aa17.39■□□□□ 0.37
CLN6-221ENST00000637494 HTR6P50406 440 aa17.39■□□□□ 0.37
CLN6-221ENST00000637494 HMGCS1Q01581 520 aa17.39■□□□□ 0.37
CLN6-221ENST00000637494 SF3B4Q15427 424 aaKnown RBP eCLIP17.39■□□□□ 0.37
CLN6-221ENST00000637494 NNATQ16517 81 aa17.39■□□□□ 0.37
CLN6-221ENST00000637494 TDRPQ86YL5 185 aa17.39■□□□□ 0.37
CLN6-221ENST00000637494 CCDC71Q8IV32 467 aaPredicted RBP17.39■□□□□ 0.37
CLN6-221ENST00000637494 CCDC116Q8IYX3 515 aa17.39■□□□□ 0.37
CLN6-221ENST00000637494 RPRMLQ8N4K4 120 aa17.39■□□□□ 0.37
CLN6-221ENST00000637494 OR52R1Q8NGF1 315 aa17.39■□□□□ 0.37
CLN6-221ENST00000637494 C16orf78Q8WTQ4 265 aa17.39■□□□□ 0.37
CLN6-221ENST00000637494 EXOSC8Q96B26 276 aaKnown RBP17.39■□□□□ 0.37
CLN6-221ENST00000637494 ERP27Q96DN0 273 aa17.39■□□□□ 0.37
CLN6-221ENST00000637494 CNRIP1Q96F85 164 aaPredicted RBP17.39■□□□□ 0.37
CLN6-221ENST00000637494 ITPAQ9BY32 194 aa17.39■□□□□ 0.37
CLN6-221ENST00000637494 GSTO2Q9H4Y5 243 aa17.39■□□□□ 0.37
CLN6-221ENST00000637494 ZNF639Q9UID6 485 aa17.39■□□□□ 0.37
CLN6-221ENST00000637494 PLLPQ9Y342 182 aa17.39■□□□□ 0.37
CLN6-221ENST00000637494 PCDHGB3Q9Y5G1 929 aa17.39■□□□□ 0.37
CLN6-221ENST00000637494 G3V2L1 256 aa17.38■□□□□ 0.37
CLN6-221ENST00000637494 PROCP04070 461 aa17.38■□□□□ 0.37
CLN6-221ENST00000637494 ABCB1P08183 1280 aaPredicted RBP17.38■□□□□ 0.37
CLN6-221ENST00000637494 ELAVL4P26378 380 aaKnown RBP17.38■□□□□ 0.37
CLN6-221ENST00000637494 MPIP34949 423 aa17.38■□□□□ 0.37
CLN6-221ENST00000637494 CRHR1P34998 444 aa17.38■□□□□ 0.37
CLN6-221ENST00000637494 KRT20P35900 424 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms