RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 METTL7AQ9H8H3 244 aa16.46■□□□□ 0.23
PNKP-225ENST00000636214 ACKR4Q9NPB9 350 aa16.46■□□□□ 0.23
PNKP-225ENST00000636214 TMEM216Q9P0N5 145 aa16.46■□□□□ 0.23
PNKP-225ENST00000636214 PRODH2Q9UF12 536 aa16.46■□□□□ 0.23
PNKP-225ENST00000636214 FBN2P35556 2912 aa16.46■□□□□ 0.23
PNKP-225ENST00000636214 GNG14A0A1W2PPG7 69 aa16.45■□□□□ 0.22
PNKP-225ENST00000636214 ATP1B1P05026 303 aa16.45■□□□□ 0.22
PNKP-225ENST00000636214 GSTA1P08263 222 aa16.45■□□□□ 0.22
PNKP-225ENST00000636214 SBK3P0C264 359 aa16.45■□□□□ 0.22
PNKP-225ENST00000636214 RHOXF2BP0C7M4 288 aa16.45■□□□□ 0.22
PNKP-225ENST00000636214 GLI4P10075 376 aa16.45■□□□□ 0.22
PNKP-225ENST00000636214 GPX3P22352 226 aa16.45■□□□□ 0.22
PNKP-225ENST00000636214 MSX1P28360 303 aa16.45■□□□□ 0.22
PNKP-225ENST00000636214 ACSM2AQ08AH3 577 aa16.45■□□□□ 0.22
PNKP-225ENST00000636214 GALNT1Q10472 559 aaPredicted RBP16.45■□□□□ 0.22
PNKP-225ENST00000636214 SF3B4Q15427 424 aaKnown RBP eCLIP16.45■□□□□ 0.222e-7■■■□□ 18.5
PNKP-225ENST00000636214 ACSM2BQ68CK6 577 aa16.45■□□□□ 0.22
PNKP-225ENST00000636214 SAMD14Q8IZD0 417 aaPredicted RBP16.45■□□□□ 0.22
PNKP-225ENST00000636214 ZNF615Q8N8J6 731 aa16.45■□□□□ 0.22
PNKP-225ENST00000636214 GBP7Q8N8V2 638 aaPredicted RBP16.45■□□□□ 0.22
PNKP-225ENST00000636214 TM4SF18Q96CE8 201 aa16.45■□□□□ 0.22
PNKP-225ENST00000636214 TMEM237Q96Q45 408 aa16.45■□□□□ 0.22
PNKP-225ENST00000636214 RHOXF2Q9BQY4 288 aa16.45■□□□□ 0.22
PNKP-225ENST00000636214 MCCC2Q9HCC0 563 aa16.45■□□□□ 0.22
PNKP-225ENST00000636214 SPRR3Q9UBC9 169 aa16.45■□□□□ 0.22
PNKP-225ENST00000636214 MCM8Q9UJA3 840 aa16.45■□□□□ 0.22
PNKP-225ENST00000636214 ITGB1BP2Q9UKP3 347 aa16.45■□□□□ 0.22
PNKP-225ENST00000636214 UTS2RQ9UKP6 389 aa16.45■□□□□ 0.22
PNKP-225ENST00000636214 FAM215AQ9Y5M1 114 aa16.45■□□□□ 0.22
PNKP-225ENST00000636214 HCFC1P51610 2035 aa16.45■□□□□ 0.22
PNKP-225ENST00000636214 A0A1B0GTL3 188 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 DLX3O60479 287 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 TRIM3O75382 744 aaPredicted RBP16.44■□□□□ 0.22
PNKP-225ENST00000636214 TOXO94900 526 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 ENO1P06733 434 aaKnown RBP16.44■□□□□ 0.22
PNKP-225ENST00000636214 IMPDH1P20839 514 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 ABCD3P28288 659 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 PKNOX1P55347 436 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 DCAF7P61962 342 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 PLCXD2Q0VAA5 305 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 MAP4K2Q12851 820 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 LCP2Q13094 533 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 NNATQ16517 81 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 PRICKLE4Q2TBC4 344 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 SLC25A35Q3KQZ1 300 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 UNC50Q53HI1 259 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 SPIN4Q56A73 249 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 BICRALQ6AI39 1079 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 FAM111BQ6SJ93 734 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 WDR53Q7Z5U6 358 aaPredicted RBP16.44■□□□□ 0.22
PNKP-225ENST00000636214 ADCY4Q8NFM4 1077 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 ADIPOR1Q96A54 375 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 TRIM44Q96DX7 344 aaPredicted RBP16.44■□□□□ 0.22
PNKP-225ENST00000636214 CCDC126Q96EE4 140 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 HSPBAP1Q96EW2 488 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 LRRC46Q96FV0 321 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 LCORQ96JN0 433 aaPredicted RBP16.44■□□□□ 0.22
PNKP-225ENST00000636214 PROK2Q9HC23 129 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 MAT2BQ9NZL9 334 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 SENP1Q9P0U3 644 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 TBK1Q9UHD2 729 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 PCDHGB3Q9Y5G1 929 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 NCKAP5O14513 1909 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 ARHGAP21Q5T5U3 1957 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 EXPH5Q8NEV8 1989 aa16.44■□□□□ 0.22
PNKP-225ENST00000636214 SPG11Q96JI7 2443 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 GOLGA8RI6L899 631 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 ACOX3O15254 700 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 PCDH7O60245 1069 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 CRCPO75575 148 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 PPM1BO75688 479 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 BCAS2O75934 225 aaPredicted RBP16.43■□□□□ 0.22
PNKP-225ENST00000636214 NAGAP17050 411 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 ENDOUP21128 410 aaKnown RBP16.43■□□□□ 0.22
PNKP-225ENST00000636214 DUSP8Q13202 625 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 MYBPHQ13203 477 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 HEPACAMQ14CZ8 416 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 EXOSC7Q15024 291 aaKnown RBP16.43■□□□□ 0.22
PNKP-225ENST00000636214 ERCC6LQ2NKX8 1250 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 TCHHL1Q5QJ38 904 aaPredicted RBP16.43■□□□□ 0.22
PNKP-225ENST00000636214 RIPPLY2Q5TAB7 128 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 CES4AQ5XG92 561 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 PM20D2Q8IYS1 436 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 ULK2Q8IYT8 1036 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 TMEM151AQ8N4L1 468 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 CCNYL1Q8N7R7 359 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 OR52R1Q8NGF1 315 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 DTNBP1Q96EV8 351 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 ZNF559Q9BR84 538 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 ITPAQ9BY32 194 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 ANGPTL4Q9BY76 406 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 NXF5Q9H1B4 397 aaKnown RBP16.43■□□□□ 0.22
PNKP-225ENST00000636214 KLRF1Q9NZS2 232 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 FETUBQ9UGM5 382 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 DCDC2Q9UHG0 476 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 ZNF225Q9UK10 706 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 CES1P1Q9UKY3 287 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 DLGAP4Q9Y2H0 992 aa16.43■□□□□ 0.22
PNKP-225ENST00000636214 TEP1Q99973 2627 aaKnown RBP16.43■□□□□ 0.22
PNKP-225ENST00000636214 A0A0G2JNJ9 132 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms