RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 MYO1GB0I1T2 1018 aa13.51□□□□□ -0.25
LINC00339-208ENST00000634934 TERTO14746 1132 aaKnown RBP13.51□□□□□ -0.25
LINC00339-208ENST00000634934 SORBS2O94875 1100 aaKnown RBP13.51□□□□□ -0.25
LINC00339-208ENST00000634934 SLC35E2P0CK97 266 aa13.51□□□□□ -0.25
LINC00339-208ENST00000634934 TNNI3P19429 210 aa13.51□□□□□ -0.25
LINC00339-208ENST00000634934 CAPN3P20807 821 aa13.51□□□□□ -0.25
LINC00339-208ENST00000634934 SLC7A1P30825 629 aa13.51□□□□□ -0.25
LINC00339-208ENST00000634934 MPIP34949 423 aa13.51□□□□□ -0.25
LINC00339-208ENST00000634934 PTGER1P34995 402 aa13.51□□□□□ -0.25
LINC00339-208ENST00000634934 MANFP55145 182 aaKnown RBP13.51□□□□□ -0.25
LINC00339-208ENST00000634934 PLIN5Q00G26 463 aa13.51□□□□□ -0.25
LINC00339-208ENST00000634934 DUSP2Q05923 314 aa13.51□□□□□ -0.25
LINC00339-208ENST00000634934 TLR1Q15399 786 aa13.51□□□□□ -0.25
LINC00339-208ENST00000634934 NATD1Q8N6N6 113 aa13.51□□□□□ -0.25
LINC00339-208ENST00000634934 DOK4Q8TEW6 326 aa13.51□□□□□ -0.25
LINC00339-208ENST00000634934 ZBED6CLQ96FA7 236 aaPredicted RBP13.51□□□□□ -0.25
LINC00339-208ENST00000634934 RBM18Q96H35 190 aaKnown RBP13.51□□□□□ -0.25
LINC00339-208ENST00000634934 ZNF597Q96LX8 424 aa13.51□□□□□ -0.25
LINC00339-208ENST00000634934 ZNF681Q96N22 645 aa13.51□□□□□ -0.25
LINC00339-208ENST00000634934 AMDHD1Q96NU7 426 aa13.51□□□□□ -0.25
LINC00339-208ENST00000634934 DCBLD2Q96PD2 775 aa13.51□□□□□ -0.25
LINC00339-208ENST00000634934 EFHD1Q9BUP0 239 aa13.51□□□□□ -0.25
LINC00339-208ENST00000634934 SPAG4Q9NPE6 437 aa13.51□□□□□ -0.25
LINC00339-208ENST00000634934 SLAMF7Q9NQ25 335 aa13.51□□□□□ -0.25
LINC00339-208ENST00000634934 PNO1Q9NRX1 252 aaKnown RBP13.51□□□□□ -0.25
LINC00339-208ENST00000634934 SEMA3GQ9NS98 782 aa13.51□□□□□ -0.25
LINC00339-208ENST00000634934 ARMC1Q9NVT9 282 aa13.51□□□□□ -0.25
LINC00339-208ENST00000634934 FAM120CQ9NX05 1096 aaKnown RBP13.51□□□□□ -0.25
LINC00339-208ENST00000634934 TMEM181Q9P2C4 612 aa13.51□□□□□ -0.25
LINC00339-208ENST00000634934 CLDN16Q9Y5I7 305 aa13.51□□□□□ -0.25
LINC00339-208ENST00000634934 MRPS18BQ9Y676 258 aaKnown RBP13.51□□□□□ -0.25
LINC00339-208ENST00000634934 DSPP15924 2871 aaKnown RBP13.5□□□□□ -0.25
LINC00339-208ENST00000634934 TCRBV16S1A1N1A0A5B0 115 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 A8MUA0 341 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 ANGPT2O15123 496 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 CPSF4O95639 269 aaKnown RBP13.5□□□□□ -0.25
LINC00339-208ENST00000634934 LIFP15018 202 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 NT5EP21589 574 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 OTX2P32243 289 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 STT3AP46977 705 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 WNT3P56703 355 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 OR4D2P58180 307 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 IGLV3-21P80748 117 aaPredicted RBP13.5□□□□□ -0.25
LINC00339-208ENST00000634934 MS4A2Q01362 244 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 HSPB3Q12988 150 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 ACACAQ13085 2346 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 CLN3Q13286 438 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 BIKQ13323 160 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 MAPKAPK3Q16644 382 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 SLC2A7Q6PXP3 512 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 ZNF551Q7Z340 670 aaPredicted RBP13.5□□□□□ -0.25
LINC00339-208ENST00000634934 ANKRD37Q7Z713 158 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 CLECL1Q8IZS7 167 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 BHLHE22Q8NFJ8 381 aaPredicted RBP13.5□□□□□ -0.25
LINC00339-208ENST00000634934 ZFP28Q8NHY6 868 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 KCNE4Q8WWG9 221 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 HOPXQ9BPY8 73 aaPredicted RBP13.5□□□□□ -0.25
LINC00339-208ENST00000634934 MESP1Q9BRJ9 268 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 OSBPL11Q9BXB4 747 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 FAM117AQ9C073 453 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 GLIPR2Q9H4G4 154 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 RMND5AQ9H871 391 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 ABCD2Q9UBJ2 740 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 C19orf25Q9UFG5 118 aaPredicted RBP13.5□□□□□ -0.25
LINC00339-208ENST00000634934 NDUFAF1Q9Y375 327 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 EPG5Q9HCE0 2579 aa13.5□□□□□ -0.25
LINC00339-208ENST00000634934 IGHV3-20A0A0C4DH32 117 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 A0A1W2PP18 115 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 TMEM8BA6NDV4 472 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 AQP12BA6NM10 295 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 EIF4E1BA6NMX2 242 aaKnown RBP13.49□□□□□ -0.25
LINC00339-208ENST00000634934 RNASET2O00584 256 aaKnown RBP13.49□□□□□ -0.25
LINC00339-208ENST00000634934 C6orf47O95873 294 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 IGHEP01854 428 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 ABCB1P08183 1280 aaPredicted RBP13.49□□□□□ -0.25
LINC00339-208ENST00000634934 CYC1P08574 325 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 ZNF26P17031 533 aaPredicted RBP13.49□□□□□ -0.25
LINC00339-208ENST00000634934 GPC1P35052 558 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 LTB4RQ15722 352 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 CEBPEQ15744 281 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 ST3GAL2Q16842 350 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 C6orf10Q5SRN2 563 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 AQP12AQ8IXF9 295 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 LILRA2Q8N149 483 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 PCYOX1LQ8NBM8 494 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 ZNF248Q8NDW4 579 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 C7orf57Q8NEG2 295 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 OR4A15Q8NGL6 344 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 OR9A2Q8NGT5 310 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 SUN3Q8TAQ9 357 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 OR5P2Q8WZ92 322 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 C8orf44Q96CB5 159 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 GPATCH1Q9BRR8 931 aaKnown RBP13.49□□□□□ -0.25
LINC00339-208ENST00000634934 PELOQ9BRX2 385 aaKnown RBP13.49□□□□□ -0.25
LINC00339-208ENST00000634934 SLC52A3Q9NQ40 469 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 ACSS1Q9NUB1 689 aaPredicted RBP13.49□□□□□ -0.25
LINC00339-208ENST00000634934 PCDHGB4Q9UN71 923 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 PCDHGA6Q9Y5G7 932 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 AP4B1Q9Y6B7 739 aa13.49□□□□□ -0.25
LINC00339-208ENST00000634934 CROCCQ5TZA2 2017 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms