RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 OR14L1PQ8NHC6 308 aa18.29■□□□□ 0.52
TARDBP-228ENST00000629725 HUS1BQ8NHY5 278 aa18.29■□□□□ 0.52
TARDBP-228ENST00000629725 UCN3Q969E3 161 aa18.29■□□□□ 0.52
TARDBP-228ENST00000629725 MED18Q9BUE0 208 aa18.29■□□□□ 0.52
TARDBP-228ENST00000629725 G6PC3Q9BUM1 346 aa18.29■□□□□ 0.52
TARDBP-228ENST00000629725 GSX2Q9BZM3 304 aa18.29■□□□□ 0.52
TARDBP-228ENST00000629725 OR10A5Q9H207 317 aa18.29■□□□□ 0.52
TARDBP-228ENST00000629725 CAB39LQ9H9S4 337 aa18.29■□□□□ 0.52
TARDBP-228ENST00000629725 WDR41Q9HAD4 459 aa18.29■□□□□ 0.52
TARDBP-228ENST00000629725 LYARQ9NX58 379 aaKnown RBP18.29■□□□□ 0.52
TARDBP-228ENST00000629725 NSMCE4AQ9NXX6 385 aa18.29■□□□□ 0.52
TARDBP-228ENST00000629725 MOCS1Q9NZB8 636 aa18.29■□□□□ 0.52
TARDBP-228ENST00000629725 RNF112Q9ULX5 631 aa18.29■□□□□ 0.52
TARDBP-228ENST00000629725 ASB4Q9Y574 426 aa18.29■□□□□ 0.52
TARDBP-228ENST00000629725 A0A1W2PR48 441 aa18.28■□□□□ 0.52
TARDBP-228ENST00000629725 CRLF1O75462 422 aa18.28■□□□□ 0.52
TARDBP-228ENST00000629725 CRYGSP22914 178 aa18.28■□□□□ 0.52
TARDBP-228ENST00000629725 ARFIP1P53367 373 aa18.28■□□□□ 0.52
TARDBP-228ENST00000629725 ATP6V0D1P61421 351 aa18.28■□□□□ 0.52
TARDBP-228ENST00000629725 FUT7Q11130 342 aa18.28■□□□□ 0.52
TARDBP-228ENST00000629725 MORF4L2Q15014 288 aa18.28■□□□□ 0.52
TARDBP-228ENST00000629725 MRM1Q6IN84 353 aaKnown RBP18.28■□□□□ 0.52
TARDBP-228ENST00000629725 GRHL2Q6ISB3 625 aa18.28■□□□□ 0.52
TARDBP-228ENST00000629725 SLC30A6Q6NXT4 461 aa18.28■□□□□ 0.52
TARDBP-228ENST00000629725 TMEM81Q6P7N7 255 aa18.28■□□□□ 0.52
TARDBP-228ENST00000629725 CYP20A1Q6UW02 462 aa18.28■□□□□ 0.52
TARDBP-228ENST00000629725 GRAMD2AQ8IUY3 354 aa18.28■□□□□ 0.52
TARDBP-228ENST00000629725 ZNF615Q8N8J6 731 aa18.28■□□□□ 0.52
TARDBP-228ENST00000629725 C17orf47Q8NEP4 570 aa18.28■□□□□ 0.52
TARDBP-228ENST00000629725 EXT2Q93063 718 aa18.28■□□□□ 0.52
TARDBP-228ENST00000629725 FAM111AQ96PZ2 611 aa18.28■□□□□ 0.52
TARDBP-228ENST00000629725 MTERF1Q99551 399 aaKnown RBP18.28■□□□□ 0.52
TARDBP-228ENST00000629725 MCMBPQ9BTE3 642 aa18.28■□□□□ 0.52
TARDBP-228ENST00000629725 MAPRE3Q9UPY8 281 aa18.28■□□□□ 0.52
TARDBP-228ENST00000629725 SONP18583 2426 aaKnown RBP18.27■□□□□ 0.52
TARDBP-228ENST00000629725 A0A1W2PNV4 684 aa18.27■□□□□ 0.52
TARDBP-228ENST00000629725 C2orf72A6NCS6 295 aa18.27■□□□□ 0.52
TARDBP-228ENST00000629725 TMPRSS11DO60235 418 aa18.27■□□□□ 0.52
TARDBP-228ENST00000629725 ICOSLGO75144 302 aa18.27■□□□□ 0.52
TARDBP-228ENST00000629725 PPM1BO75688 479 aa18.27■□□□□ 0.52
TARDBP-228ENST00000629725 CBR3O75828 277 aa18.27■□□□□ 0.52
TARDBP-228ENST00000629725 SMNDC1O75940 238 aaKnown RBP eCLIP18.27■□□□□ 0.522e-8■■■■■ 29.2
TARDBP-228ENST00000629725 CT62P0C5K7 136 aa18.27■□□□□ 0.52
TARDBP-228ENST00000629725 RHOXF2BP0C7M4 288 aa18.27■□□□□ 0.52
TARDBP-228ENST00000629725 FAM58BPP0C7Q3 252 aa18.27■□□□□ 0.52
TARDBP-228ENST00000629725 IVDP26440 423 aa18.27■□□□□ 0.52
TARDBP-228ENST00000629725 PIK3CBP42338 1070 aa18.27■□□□□ 0.52
TARDBP-228ENST00000629725 PTH2RP49190 550 aa18.27■□□□□ 0.52
TARDBP-228ENST00000629725 PCYT1AP49585 367 aa18.27■□□□□ 0.52
TARDBP-228ENST00000629725 IFNEQ86WN2 208 aa18.27■□□□□ 0.52
TARDBP-228ENST00000629725 RDH11Q8TC12 318 aa18.27■□□□□ 0.52
TARDBP-228ENST00000629725 ACTRT1Q8TDG2 376 aa18.27■□□□□ 0.52
TARDBP-228ENST00000629725 CTHRC1Q96CG8 243 aa18.27■□□□□ 0.52
TARDBP-228ENST00000629725 TSPAN17Q96FV3 270 aa18.27■□□□□ 0.52
TARDBP-228ENST00000629725 OSBPL11Q9BXB4 747 aa18.27■□□□□ 0.52
TARDBP-228ENST00000629725 ZNF717Q9BY31 904 aaPredicted RBP18.27■□□□□ 0.52
TARDBP-228ENST00000629725 ACTR8Q9H981 624 aa18.27■□□□□ 0.52
TARDBP-228ENST00000629725 GALNT9Q9HCQ5 603 aa18.27■□□□□ 0.52
TARDBP-228ENST00000629725 SERHLQ9NQF3 203 aa18.27■□□□□ 0.52
TARDBP-228ENST00000629725 EXO1Q9UQ84 846 aaKnown RBP18.27■□□□□ 0.52
TARDBP-228ENST00000629725 MTO1Q9Y2Z2 717 aaKnown RBP18.27■□□□□ 0.52
TARDBP-228ENST00000629725 A0A0A6YYD5 115 aa18.26■□□□□ 0.51
TARDBP-228ENST00000629725 PLOD2O00469 737 aa18.26■□□□□ 0.51
TARDBP-228ENST00000629725 PHGDHO43175 533 aaKnown RBP18.26■□□□□ 0.51
TARDBP-228ENST00000629725 EEDO75530 441 aaKnown RBP18.26■□□□□ 0.51
TARDBP-228ENST00000629725 AIFM1O95831 613 aa18.26■□□□□ 0.51
TARDBP-228ENST00000629725 NAGAP17050 411 aa18.26■□□□□ 0.51
TARDBP-228ENST00000629725 PIK3R1P27986 724 aa18.26■□□□□ 0.51
TARDBP-228ENST00000629725 CD79BP40259 229 aa18.26■□□□□ 0.51
TARDBP-228ENST00000629725 STARP49675 285 aa18.26■□□□□ 0.51
TARDBP-228ENST00000629725 GFRA1P56159 465 aa18.26■□□□□ 0.51
TARDBP-228ENST00000629725 ILF2Q12905 390 aaKnown RBP18.26■□□□□ 0.51
TARDBP-228ENST00000629725 SNTA1Q13424 505 aa18.26■□□□□ 0.51
TARDBP-228ENST00000629725 OR2B2Q9GZK3 357 aa18.26■□□□□ 0.51
TARDBP-228ENST00000629725 DDX47Q9H0S4 455 aaKnown RBP18.26■□□□□ 0.51
TARDBP-228ENST00000629725 NXF5Q9H1B4 397 aaKnown RBP18.26■□□□□ 0.51
TARDBP-228ENST00000629725 KLRF1Q9NZS2 232 aa18.26■□□□□ 0.51
TARDBP-228ENST00000629725 OPTCQ9UBM4 332 aa18.26■□□□□ 0.51
TARDBP-228ENST00000629725 A0A1W2PS29 197 aa18.25■□□□□ 0.51
TARDBP-228ENST00000629725 K7EPI3 171 aa18.25■□□□□ 0.51
TARDBP-228ENST00000629725 PGRMC2O15173 223 aa18.25■□□□□ 0.51
TARDBP-228ENST00000629725 TGM6O95932 706 aa18.25■□□□□ 0.51
TARDBP-228ENST00000629725 PTX3P26022 381 aaPredicted RBP18.25■□□□□ 0.51
TARDBP-228ENST00000629725 PTGDSP41222 190 aa18.25■□□□□ 0.51
TARDBP-228ENST00000629725 LHX2P50458 406 aa18.25■□□□□ 0.51
TARDBP-228ENST00000629725 ARL4CP56559 192 aa18.25■□□□□ 0.51
TARDBP-228ENST00000629725 NNATQ16517 81 aa18.25■□□□□ 0.51
TARDBP-228ENST00000629725 C6orf163Q5TEZ5 329 aa18.25■□□□□ 0.51
TARDBP-228ENST00000629725 DESI1Q6ICB0 168 aa18.25■□□□□ 0.51
TARDBP-228ENST00000629725 OR52E8Q6IFG1 317 aa18.25■□□□□ 0.51
TARDBP-228ENST00000629725 AAGABQ6PD74 315 aa18.25■□□□□ 0.51
TARDBP-228ENST00000629725 NUP54Q7Z3B4 507 aa18.25■□□□□ 0.51
TARDBP-228ENST00000629725 MYLK4Q86YV6 388 aaPredicted RBP18.25■□□□□ 0.51
TARDBP-228ENST00000629725 LRRC8AQ8IWT6 810 aa18.25■□□□□ 0.51
TARDBP-228ENST00000629725 CNEP1R1Q8N9A8 125 aa18.25■□□□□ 0.51
TARDBP-228ENST00000629725 FBXO36Q8NEA4 188 aa18.25■□□□□ 0.51
TARDBP-228ENST00000629725 OR7G1Q8NGA0 311 aa18.25■□□□□ 0.51
TARDBP-228ENST00000629725 HGDQ93099 445 aa18.25■□□□□ 0.51
TARDBP-228ENST00000629725 STARD4Q96DR4 205 aa18.25■□□□□ 0.51
TARDBP-228ENST00000629725 HS3ST6Q96QI5 342 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms