RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 TCEA1P23193 301 aaKnown RBP13.34□□□□□ -0.27
PNKP-218ENST00000625299 ABCD3P28288 659 aa13.34□□□□□ -0.27
PNKP-218ENST00000625299 SERPINB1P30740 379 aa13.34□□□□□ -0.27
PNKP-218ENST00000625299 PTH2RP49190 550 aa13.34□□□□□ -0.27
PNKP-218ENST00000625299 GAB1Q13480 694 aa13.34□□□□□ -0.27
PNKP-218ENST00000625299 CDKL4Q5MAI5 379 aa13.34□□□□□ -0.27
PNKP-218ENST00000625299 C6orf163Q5TEZ5 329 aa13.34□□□□□ -0.27
PNKP-218ENST00000625299 P4HA3Q7Z4N8 544 aa13.34□□□□□ -0.27
PNKP-218ENST00000625299 TRIM42Q8IWZ5 723 aa13.34□□□□□ -0.27
PNKP-218ENST00000625299 CNEP1R1Q8N9A8 125 aa13.34□□□□□ -0.27
PNKP-218ENST00000625299 TSPAN17Q96FV3 270 aa13.34□□□□□ -0.27
PNKP-218ENST00000625299 PIGQQ9BRB3 760 aa13.34□□□□□ -0.27
PNKP-218ENST00000625299 OSBPL11Q9BXB4 747 aa13.34□□□□□ -0.27
PNKP-218ENST00000625299 OR10A5Q9H207 317 aa13.34□□□□□ -0.27
PNKP-218ENST00000625299 CXorf21Q9HAI6 301 aa13.34□□□□□ -0.27
PNKP-218ENST00000625299 LYARQ9NX58 379 aaKnown RBP13.34□□□□□ -0.27
PNKP-218ENST00000625299 KLRF1Q9NZS2 232 aa13.34□□□□□ -0.27
PNKP-218ENST00000625299 CLCF1Q9UBD9 225 aa13.34□□□□□ -0.27
PNKP-218ENST00000625299 WIF1Q9Y5W5 379 aa13.34□□□□□ -0.27
PNKP-218ENST00000625299 SONP18583 2426 aaKnown RBP13.33□□□□□ -0.27
PNKP-218ENST00000625299 A0A1W2PNV4 684 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 SUPT3HB4E1H0 165 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 CDH16O75309 829 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 SUPT3HO75486 399 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 GBAP04062 536 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 ABCB1P08183 1280 aaPredicted RBP13.33□□□□□ -0.28
PNKP-218ENST00000625299 FAM58BPP0C7Q3 252 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 NT5EP21589 574 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 CNTFP26441 200 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 ARL4CP56559 192 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 ATP6V0D1P61421 351 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 POU4F1Q01851 419 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 FASTKD3Q14CZ7 662 aaKnown RBP13.33□□□□□ -0.28
PNKP-218ENST00000625299 MORF4L2Q15014 288 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 GRHL2Q6ISB3 625 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 C20orf204Q6ZNR8 217 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 ZNF550Q7Z398 422 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 IFNEQ86WN2 208 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 FBXO36Q8NEA4 188 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 PPP1R14CQ8TAE6 165 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 ADIPOR1Q96A54 375 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 LRRC39Q96DD0 335 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 HS3ST6Q96QI5 342 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 NODALQ96S42 347 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 G6PC3Q9BUM1 346 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 NXF5Q9H1B4 397 aaKnown RBP13.33□□□□□ -0.28
PNKP-218ENST00000625299 ACTR8Q9H981 624 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 NSMCE4AQ9NXX6 385 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 EHD3Q9NZN3 535 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 OPTCQ9UBM4 332 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 FETUBQ9UGM5 382 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 DTX4Q9Y2E6 619 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 JRKLQ9Y4A0 524 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 ASB4Q9Y574 426 aa13.33□□□□□ -0.28
PNKP-218ENST00000625299 ANK3Q12955 4377 aaKnown RBP13.33□□□□□ -0.28
PNKP-218ENST00000625299 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 A0A0A6YYD5 115 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 RNF212BA8MTL3 300 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 PLOD2O00469 737 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 ICOSLGO75144 302 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 CRLF1O75462 422 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 PPM1BO75688 479 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 TNFSF13O75888 250 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 WISP3O95389 354 aaPredicted RBP13.32□□□□□ -0.28
PNKP-218ENST00000625299 TGM6O95932 706 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 GPX3P22352 226 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 CRYGSP22914 178 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 PIK3R1P27986 724 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 GALNSP34059 522 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 GMPRP36959 345 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 CD79BP40259 229 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 MC3RP41968 323 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 KCNJ5P48544 419 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 EEF1A1P68104 462 aaKnown RBP13.32□□□□□ -0.28
PNKP-218ENST00000625299 SIRPAP78324 504 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 PHEXP78562 749 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 PLCXD2Q0VAA5 305 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 PDIA2Q13087 525 aaKnown RBP13.32□□□□□ -0.28
PNKP-218ENST00000625299 FRG1Q14331 258 aaKnown RBP13.32□□□□□ -0.28
PNKP-218ENST00000625299 EEF1A1P5Q5VTE0 462 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 OR52E8Q6IFG1 317 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 SLC30A6Q6NXT4 461 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 VWA1Q6PCB0 445 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 SCIMPQ6UWF3 145 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 ADGRE4PQ86SQ3 457 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 ZNF615Q8N8J6 731 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 ACTRT1Q8TDG2 376 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 SFXN2Q96NB2 322 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 GSX2Q9BZM3 304 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 OR2B2Q9GZK3 357 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 OPN3Q9H1Y3 402 aaPredicted RBP13.32□□□□□ -0.28
PNKP-218ENST00000625299 ALG9Q9H6U8 611 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 SMYD2Q9NRG4 433 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 TAS2R10Q9NYW0 307 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 TXNDC16Q9P2K2 825 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 ADGRE2Q9UHX3 823 aa13.32□□□□□ -0.28
PNKP-218ENST00000625299 RAI1Q7Z5J4 1906 aaPredicted RBP13.32□□□□□ -0.28
PNKP-218ENST00000625299 K7EPI3 171 aa13.31□□□□□ -0.28
PNKP-218ENST00000625299 UBXN8O00124 270 aa13.31□□□□□ -0.28
PNKP-218ENST00000625299 MSTNO14793 375 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms