RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 SERPINA4P29622 427 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 TALDO1P37837 337 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 RPL3P39023 403 aaKnown RBP13.34□□□□□ -0.27
LDB3-209ENST00000623056 NNMTP40261 264 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 PIN1Q13526 163 aaPredicted RBP13.34□□□□□ -0.27
LDB3-209ENST00000623056 SLCO4C1Q6ZQN7 724 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 TMPRSS11BQ86T26 416 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 MMP21Q8N119 569 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 ZNF485Q8NCK3 441 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 OTULINQ96BN8 352 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 SCRN2Q96FV2 425 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 SCMH1Q96GD3 660 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 DPCDQ9BVM2 203 aaPredicted RBP13.34□□□□□ -0.27
LDB3-209ENST00000623056 NLNQ9BYT8 704 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 GHITMQ9H3K2 345 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 MYNNQ9NPC7 610 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 ZNF224Q9NZL3 707 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 CLCA2Q9UQC9 943 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 TRAV6A0A075B6T7 132 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 IRGMA1A4Y4 181 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 C7orf66A4D0T2 115 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 TMEM202A6NGA9 273 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 A8MUA0 341 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 GABRPO00591 440 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 PRRG1O14668 218 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 PRODHO43272 600 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 ZNF821O75541 412 aaPredicted RBP13.34□□□□□ -0.27
LDB3-209ENST00000623056 SLC16A8O95907 504 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 EOMESO95936 686 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 EPHX1P07099 455 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 ANXA3P12429 323 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 ATF4P18848 351 aaPredicted RBP13.34□□□□□ -0.27
LDB3-209ENST00000623056 UQCRC2P22695 453 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 IMPA1P29218 277 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 BTCP35070 178 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 MTNR1AP48039 350 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 CSNK1DP48730 415 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 LSM11P83369 360 aaKnown RBP eCLIP13.34□□□□□ -0.27
LDB3-209ENST00000623056 CDK5Q00535 292 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 RPA4Q13156 261 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 FGFBP1Q14512 234 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 B3GLCTQ6Y288 498 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 ZER1Q7Z7L7 766 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 LHFPL3Q86UP9 236 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 GPALPP1Q8IXQ4 340 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 ADGRF3Q8IZF5 1079 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 ASZ1Q8WWH4 475 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 SLC9A6Q92581 669 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 GPA33Q99795 319 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 C2orf49Q9BVC5 232 aaPredicted RBP13.34□□□□□ -0.27
LDB3-209ENST00000623056 OR51B5Q9H339 312 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 A4GALTQ9NPC4 353 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 UCKL1Q9NWZ5 548 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 ACAD8Q9UKU7 415 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 GPR52Q9Y2T5 361 aa13.34□□□□□ -0.27
LDB3-209ENST00000623056 C2orf92A0A1B0GVN3 265 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 IGSF6O95976 241 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 DHFRP00374 187 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 TGFB1P01137 390 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 HLA-DPB1P04440 258 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 RPLP2P05387 115 aaKnown RBP13.33□□□□□ -0.28
LDB3-209ENST00000623056 KLK1P06870 262 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 TFPIP10646 304 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 CXCL3P19876 107 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 CFL1P23528 166 aaKnown RBP13.33□□□□□ -0.28
LDB3-209ENST00000623056 HLA-FP30511 346 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 CLCNKAP51800 687 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 SMIM11AP58511 58 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 COX10Q12887 443 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 SNTA1Q13424 505 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 EXOSC2Q13868 293 aaKnown RBP13.33□□□□□ -0.28
LDB3-209ENST00000623056 KLHL12Q53G59 568 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 CLLU1Q5K131 121 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 CD300LDQ6UXZ3 194 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 SLC36A4Q6YBV0 504 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 OR6C4Q8NGE1 309 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 OR56A3Q8NH54 315 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 RAET1EQ8TD07 263 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 RFT1Q96AA3 541 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 ZNF354BQ96LW1 612 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 AIFM2Q9BRQ8 373 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 THAP7Q9BT49 309 aaPredicted RBP13.33□□□□□ -0.28
LDB3-209ENST00000623056 SLC6A16Q9GZN6 736 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 ABCG5Q9H222 651 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 LINC00597Q9H2U6 94 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 A4GNTQ9UNA3 340 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 CD8B2A6NJW9 211 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 BET1O15155 118 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 SGTAO43765 313 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 SLCO2B1O94956 709 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 IL3P08700 152 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 GAAP10253 952 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 CD8BP10966 210 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 KCNJ5P48544 419 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 SMSP52788 366 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 GRK1Q15835 563 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 MINDY4Q4G0A6 757 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 LRRC73Q5JTD7 316 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 RAET1GQ6H3X3 334 aa13.33□□□□□ -0.28
LDB3-209ENST00000623056 KIAA1211LQ6NV74 962 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms