RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 BROXQ5VW32 411 aa16.28■□□□□ 0.2
PCDHGC3-205ENST00000617641 USP53Q70EK8 1073 aa16.28■□□□□ 0.2
PCDHGC3-205ENST00000617641 SAMD14Q8IZD0 417 aaPredicted RBP16.28■□□□□ 0.2
PCDHGC3-205ENST00000617641 TAGAPQ8N103 731 aa16.28■□□□□ 0.2
PCDHGC3-205ENST00000617641 CA13Q8N1Q1 262 aa16.28■□□□□ 0.2
PCDHGC3-205ENST00000617641 C1orf216Q8TAB5 229 aa16.28■□□□□ 0.2
PCDHGC3-205ENST00000617641 ALPK1Q96QP1 1244 aa16.28■□□□□ 0.2
PCDHGC3-205ENST00000617641 PITX2Q99697 317 aa16.28■□□□□ 0.2
PCDHGC3-205ENST00000617641 MAP3K3Q99759 626 aa16.28■□□□□ 0.2
PCDHGC3-205ENST00000617641 APOL4Q9BPW4 351 aa16.28■□□□□ 0.2
PCDHGC3-205ENST00000617641 ACTRT3Q9BYD9 372 aa16.28■□□□□ 0.2
PCDHGC3-205ENST00000617641 QRSL1Q9H0R6 528 aaKnown RBP16.28■□□□□ 0.2
PCDHGC3-205ENST00000617641 LAMA1P25391 3075 aa16.28■□□□□ 0.2
PCDHGC3-205ENST00000617641 CEP192Q8TEP8 1941 aa16.28■□□□□ 0.2
PCDHGC3-205ENST00000617641 E9PQ18 207 aa16.27■□□□□ 0.2
PCDHGC3-205ENST00000617641 M0R3H8 397 aa16.27■□□□□ 0.2
PCDHGC3-205ENST00000617641 CYR61O00622 381 aa16.27■□□□□ 0.2
PCDHGC3-205ENST00000617641 XPNPEP2O43895 674 aa16.27■□□□□ 0.2
PCDHGC3-205ENST00000617641 FGF17O60258 216 aa16.27■□□□□ 0.2
PCDHGC3-205ENST00000617641 CCNB2O95067 398 aa16.27■□□□□ 0.2
PCDHGC3-205ENST00000617641 ANGPTL1O95841 491 aa16.27■□□□□ 0.2
PCDHGC3-205ENST00000617641 PROS1P07225 676 aa16.27■□□□□ 0.2
PCDHGC3-205ENST00000617641 POU2F1P14859 743 aa16.27■□□□□ 0.2
PCDHGC3-205ENST00000617641 CAPZBP47756 277 aa16.27■□□□□ 0.2
PCDHGC3-205ENST00000617641 RPS6KA3P51812 740 aa16.27■□□□□ 0.2
PCDHGC3-205ENST00000617641 NXPH1P58417 271 aa16.27■□□□□ 0.2
PCDHGC3-205ENST00000617641 LAIR1Q6GTX8 287 aa16.27■□□□□ 0.2
PCDHGC3-205ENST00000617641 FAM92BQ6ZTR7 304 aa16.27■□□□□ 0.2
PCDHGC3-205ENST00000617641 MCATQ8IVS2 390 aaKnown RBP16.27■□□□□ 0.2
PCDHGC3-205ENST00000617641 CAMKK1Q8N5S9 505 aa16.27■□□□□ 0.2
PCDHGC3-205ENST00000617641 UBE2FQ969M7 185 aa16.27■□□□□ 0.2
PCDHGC3-205ENST00000617641 CLDN23Q96B33 292 aa16.27■□□□□ 0.2
PCDHGC3-205ENST00000617641 SPACA7Q96KW9 195 aa16.27■□□□□ 0.2
PCDHGC3-205ENST00000617641 SLC38A3Q99624 504 aa16.27■□□□□ 0.2
PCDHGC3-205ENST00000617641 NMNAT1Q9HAN9 279 aaPredicted RBP16.27■□□□□ 0.2
PCDHGC3-205ENST00000617641 PAK1IP1Q9NWT1 392 aaPredicted RBP16.27■□□□□ 0.2
PCDHGC3-205ENST00000617641 TRBV4-1A0A0J9YWV2 114 aa16.27■□□□□ 0.19
PCDHGC3-205ENST00000617641 ENO4A6NNW6 628 aa16.27■□□□□ 0.19
PCDHGC3-205ENST00000617641 RDH16O75452 317 aa16.27■□□□□ 0.19
PCDHGC3-205ENST00000617641 EPPINO95925 133 aa16.27■□□□□ 0.19
PCDHGC3-205ENST00000617641 HTR1AP08908 422 aa16.27■□□□□ 0.19
PCDHGC3-205ENST00000617641 PORP16435 677 aaPredicted RBP16.27■□□□□ 0.19
PCDHGC3-205ENST00000617641 SOX18P35713 384 aa16.27■□□□□ 0.19
PCDHGC3-205ENST00000617641 PPM1FP49593 454 aaPredicted RBP16.27■□□□□ 0.19
PCDHGC3-205ENST00000617641 TOP3AQ13472 1001 aaPredicted RBP16.27■□□□□ 0.19
PCDHGC3-205ENST00000617641 GNA13Q14344 377 aa16.27■□□□□ 0.19
PCDHGC3-205ENST00000617641 ZBED5Q49AG3 693 aa16.27■□□□□ 0.19
PCDHGC3-205ENST00000617641 COLEC12Q5KU26 742 aa16.27■□□□□ 0.19
PCDHGC3-205ENST00000617641 KLHL35Q6PF15 583 aa16.27■□□□□ 0.19
PCDHGC3-205ENST00000617641 B3GNT8Q7Z7M8 397 aa16.27■□□□□ 0.19
PCDHGC3-205ENST00000617641 TSPYL5Q86VY4 417 aaPredicted RBP16.27■□□□□ 0.19
PCDHGC3-205ENST00000617641 SLC35A4Q96G79 324 aa16.27■□□□□ 0.19
PCDHGC3-205ENST00000617641 UCKL1Q9NWZ5 548 aa16.27■□□□□ 0.19
PCDHGC3-205ENST00000617641 NTMQ9P121 344 aa16.27■□□□□ 0.19
PCDHGC3-205ENST00000617641 BLOC1S6Q9UL45 172 aa16.27■□□□□ 0.19
PCDHGC3-205ENST00000617641 POFUT2Q9Y2G5 429 aa16.27■□□□□ 0.19
PCDHGC3-205ENST00000617641 HCN4Q9Y3Q4 1203 aa16.27■□□□□ 0.19
PCDHGC3-205ENST00000617641 COMMD3-BMI1R4GMX3 469 aa16.27■□□□□ 0.19
PCDHGC3-205ENST00000617641 HSPE1-MOB4S4R3N1 261 aa16.27■□□□□ 0.19
PCDHGC3-205ENST00000617641 SPACA6W5XKT8 324 aa16.27■□□□□ 0.19
PCDHGC3-205ENST00000617641 TMEM131Q92545 1883 aa16.26■□□□□ 0.19
PCDHGC3-205ENST00000617641 SPAG17Q6Q759 2223 aa16.26■□□□□ 0.19
PCDHGC3-205ENST00000617641 A0A0G2JPF8 293 aa16.26■□□□□ 0.19
PCDHGC3-205ENST00000617641 HNRNPCL2B2RXH8 293 aa16.26■□□□□ 0.19
PCDHGC3-205ENST00000617641 HNRNPCL3B7ZW38 293 aa16.26■□□□□ 0.19
PCDHGC3-205ENST00000617641 PTGES3LE9PB15 166 aa16.26■□□□□ 0.19
PCDHGC3-205ENST00000617641 ABCB7O75027 752 aa16.26■□□□□ 0.19
PCDHGC3-205ENST00000617641 HNRNPCL4P0DMR1 293 aa16.26■□□□□ 0.19
PCDHGC3-205ENST00000617641 GABARAPL2P60520 117 aa16.26■□□□□ 0.19
PCDHGC3-205ENST00000617641 RAB39AQ14964 217 aa16.26■□□□□ 0.19
PCDHGC3-205ENST00000617641 PUS10Q3MIT2 529 aaKnown RBP16.26■□□□□ 0.19
PCDHGC3-205ENST00000617641 FGD3Q5JSP0 725 aa16.26■□□□□ 0.19
PCDHGC3-205ENST00000617641 MFSD12Q6NUT3 480 aa16.26■□□□□ 0.19
PCDHGC3-205ENST00000617641 SLC16A11Q8NCK7 471 aa16.26■□□□□ 0.19
PCDHGC3-205ENST00000617641 OR9A4Q8NGU2 314 aa16.26■□□□□ 0.19
PCDHGC3-205ENST00000617641 GTPBP3Q969Y2 492 aaKnown RBP16.26■□□□□ 0.19
PCDHGC3-205ENST00000617641 MS4A4EQ96PG1 132 aa16.26■□□□□ 0.19
PCDHGC3-205ENST00000617641 SLC38A1Q9H2H9 487 aa16.26■□□□□ 0.19
PCDHGC3-205ENST00000617641 PRDM9Q9NQV7 894 aa16.26■□□□□ 0.19
PCDHGC3-205ENST00000617641 RASSF1Q9NS23 344 aa16.26■□□□□ 0.19
PCDHGC3-205ENST00000617641 RSL24D1Q9UHA3 163 aaKnown RBP16.26■□□□□ 0.19
PCDHGC3-205ENST00000617641 EML5Q05BV3 1969 aa16.26■□□□□ 0.19
PCDHGC3-205ENST00000617641 ASNA1O43681 348 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 HNRNPKP61978 463 aaKnown RBP eCLIP16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 CHRNEQ04844 493 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 DMWDQ09019 674 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 MAD2L1BPQ15013 274 aaPredicted RBP16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 TRMT12Q53H54 448 aaKnown RBP16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 C16orf62Q7Z3J2 963 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 OR2L13Q8N349 312 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 ARHGEF39Q8N4T4 335 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 AQP11Q8NBQ7 271 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 ADAMTS15Q8TE58 950 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 HRASLS5Q96KN8 279 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 SPATA5L1Q9BVQ7 753 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 BTBD2Q9BX70 525 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 FANCEQ9HB96 536 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 CLCA2Q9UQC9 943 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 PCDHGA6Q9Y5G7 932 aa16.25■□□□□ 0.19
PCDHGC3-205ENST00000617641 LILRA5A6NI73 299 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms