RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 NTNG2Q96CW9 530 aa18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 TMEM41AQ96HV5 264 aa18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 DOCK7Q96N67 2140 aa18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 TMUB1Q9BVT8 246 aa18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 UGT2B28Q9BY64 529 aa18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 NXF5Q9H1B4 397 aaKnown RBP18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 AHSPQ9NZD4 102 aa18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 ZNF629Q9UEG4 869 aaPredicted RBP18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 CES1P1Q9UKY3 287 aa18.99■□□□□ 0.63
TRAPPC3-208ENST00000616074 A0A1B0GTL3 188 aa18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 GNB5O14775 395 aa18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 KRT38O76015 456 aa18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 IL2RAP01589 272 aa18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 ABCB1P08183 1280 aaPredicted RBP18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 RBP1P09455 135 aa18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 BMP7P18075 431 aa18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 ETF1P62495 437 aaKnown RBP18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 IFT88Q13099 833 aa18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 TOMM20Q15388 145 aa18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 GGTA1PQ4G0N0 100 aa18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 SGO1Q5FBB7 561 aa18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 WIPI1Q5MNZ9 446 aaPredicted RBP18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 NSUN5P2Q63ZY6 315 aa18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 DESI1Q6ICB0 168 aa18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 C8orf74Q6P047 294 aa18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 FAM111BQ6SJ93 734 aa18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 RPS27LQ71UM5 84 aaKnown RBP18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 PAGE2Q7Z2X7 111 aa18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 MMP21Q8N119 569 aa18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 VWA5B2Q8N398 1253 aa18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 OR4F6Q8NGB9 312 aa18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 ISL2Q96A47 359 aa18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 HSPBAP1Q96EW2 488 aa18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 RMND5BQ96G75 393 aaPredicted RBP18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 LRRC1Q9BTT6 524 aa18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 MTRF1LQ9UGC7 380 aaKnown RBP18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 PCDHA9Q9Y5H5 950 aa18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 MED12Q93074 2177 aa18.98■□□□□ 0.63
TRAPPC3-208ENST00000616074 A6NNC1 897 aa18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 PPM1BO75688 479 aa18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 CD99P14209 185 aa18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 KRT15P19012 456 aa18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 PTPN6P29350 595 aa18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 MAPK12P53778 367 aa18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 MGAT2Q10469 447 aa18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 PRICKLE4Q2TBC4 344 aa18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 C10orf62Q5T681 223 aaPredicted RBP18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 FAM219BQ5XKK7 198 aa18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 TIGD3Q6B0B8 471 aa18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 SLC48A1Q6P1K1 146 aa18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 COMMD6Q7Z4G1 85 aa18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 SIMC1Q8NDZ2 872 aa18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 FAM222BQ8WU58 562 aa18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 LRRC46Q96FV0 321 aa18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 WDYHV1Q96HA8 205 aa18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 TRIB1Q96RU8 372 aa18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 ITPAQ9BY32 194 aa18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 BRINP2Q9C0B6 783 aa18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 ELOVL6Q9H5J4 265 aa18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 METTL7AQ9H8H3 244 aa18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 FARSBQ9NSD9 589 aaKnown RBP18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 MAT2BQ9NZL9 334 aa18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 CBLCQ9ULV8 474 aa18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 TMCO1Q9UM00 188 aa18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 SLC12A4Q9UP95 1085 aa18.97■□□□□ 0.63
TRAPPC3-208ENST00000616074 C1orf226A1L170 272 aa18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 SMIM24O75264 130 aa18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 ERAL1O75616 437 aaKnown RBP18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 RPS17P08708 135 aaKnown RBP18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 TACR1P25103 407 aa18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 SOX18P35713 384 aa18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 FEN1P39748 380 aaKnown RBP18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 AGFG1P52594 562 aaKnown RBP18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 DUSP2Q05923 314 aa18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 GALNT1Q10472 559 aaPredicted RBP18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 EXOSC7Q15024 291 aaKnown RBP18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 CEBPEQ15744 281 aa18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 ANGPTL8Q6UXH0 198 aa18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 MILR1Q7Z6M3 343 aa18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 CDC20BQ86Y33 519 aa18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 FAM83FQ8NEG4 500 aaPredicted RBP18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 OR1J4Q8NGS1 313 aa18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 TRPC4APQ8TEL6 797 aa18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 SLC44A1Q8WWI5 657 aa18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 HGDQ93099 445 aa18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 ABTB1Q969K4 478 aaPredicted RBP18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 NODALQ96S42 347 aa18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 FUT8Q9BYC5 575 aa18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 EPB41L4BQ9H329 900 aa18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 BCAP29Q9UHQ4 241 aa18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 FOXD3Q9UJU5 478 aaPredicted RBP18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 PLEKHA6Q9Y2H5 1048 aa18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 MPDZO75970 2070 aa18.96■□□□□ 0.63
TRAPPC3-208ENST00000616074 MBD3L4A6NDZ8 208 aaPredicted RBP18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 MBD3L3A6NE82 208 aaPredicted RBP18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 GOLGA6L10A6NI86 522 aa18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 MBD3L5A6NJ08 208 aaPredicted RBP18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 CD8B2A6NJW9 211 aa18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 PPP6CO00743 305 aa18.95■□□□□ 0.62
TRAPPC3-208ENST00000616074 PDYNP01213 254 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms