RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 RNASE12Q5GAN4 147 aaKnown RBP13.29□□□□□ -0.28
SSBP2-220ENST00000615665 OCEL1Q9H607 264 aa13.29□□□□□ -0.28
SSBP2-220ENST00000615665 TM7SF3Q9NS93 570 aa13.29□□□□□ -0.28
SSBP2-220ENST00000615665 PSORS1C1Q9UIG5 152 aa13.29□□□□□ -0.28
SSBP2-220ENST00000615665 SMIM30A4D0T7 59 aa13.29□□□□□ -0.28
SSBP2-220ENST00000615665 CLDN24A6NM45 220 aa13.29□□□□□ -0.28
SSBP2-220ENST00000615665 PCDHGA12O60330 932 aa13.29□□□□□ -0.28
SSBP2-220ENST00000615665 CD22P20273 847 aa13.29□□□□□ -0.28
SSBP2-220ENST00000615665 HIST1H1TP22492 207 aaPredicted RBP13.29□□□□□ -0.28
SSBP2-220ENST00000615665 MC3RP41968 323 aa13.29□□□□□ -0.28
SSBP2-220ENST00000615665 SLC35A2P78381 396 aa13.29□□□□□ -0.28
SSBP2-220ENST00000615665 KCNJ10P78508 379 aa13.29□□□□□ -0.28
SSBP2-220ENST00000615665 SIM1P81133 766 aaPredicted RBP13.29□□□□□ -0.28
SSBP2-220ENST00000615665 C11orf91Q3C1V1 193 aa13.29□□□□□ -0.28
SSBP2-220ENST00000615665 EOGTQ5NDL2 527 aa13.29□□□□□ -0.28
SSBP2-220ENST00000615665 TANGO2Q6ICL3 276 aa13.29□□□□□ -0.28
SSBP2-220ENST00000615665 OR4N5Q8IXE1 308 aa13.29□□□□□ -0.28
SSBP2-220ENST00000615665 NIPSNAP1Q9BPW8 284 aa13.29□□□□□ -0.28
SSBP2-220ENST00000615665 TREX2Q9BQ50 279 aaPredicted RBP13.29□□□□□ -0.28
SSBP2-220ENST00000615665 HRASLS2Q9NWW9 162 aa13.29□□□□□ -0.28
SSBP2-220ENST00000615665 TEX10Q9NXF1 929 aaPredicted RBP13.29□□□□□ -0.28
SSBP2-220ENST00000615665 NKIRAS2Q9NYR9 191 aa13.29□□□□□ -0.28
SSBP2-220ENST00000615665 ADAM29Q9UKF5 820 aa13.29□□□□□ -0.28
SSBP2-220ENST00000615665 CLEC4AQ9UMR7 237 aa13.29□□□□□ -0.28
SSBP2-220ENST00000615665 AGAP14A8MT82 685 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 B4DGG1 531 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 AREL1O15033 823 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 ENTPD6O75354 484 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 CHMP24386 653 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 BMP8BP34820 402 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 REEP5Q00765 189 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 DPTQ07507 201 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 PCDH1Q08174 1060 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 MLIPQ5VWP3 458 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 PLEKHG7Q6ZR37 379 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 BMP8AQ7Z5Y6 402 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 SNX33Q8WV41 574 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 TM4SF18Q96CE8 201 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 NEURL3Q96EH8 262 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 BARD1Q99728 777 aaKnown RBP13.28□□□□□ -0.28
SSBP2-220ENST00000615665 SMURF1Q9HCE7 757 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 THSD1Q9NS62 852 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 CNOT2Q9NZN8 540 aaKnown RBP13.28□□□□□ -0.28
SSBP2-220ENST00000615665 PCDH10Q9P2E7 1040 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 NDRG4Q9ULP0 352 aaKnown RBP13.28□□□□□ -0.28
SSBP2-220ENST00000615665 B3GNT3Q9Y2A9 372 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 MED31Q9Y3C7 131 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 ASCC3Q8N3C0 2202 aaKnown RBP13.28□□□□□ -0.28
SSBP2-220ENST00000615665 PLPP1O14494 284 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 COQ9O75208 318 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 OR5F1O95221 314 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 HNRNPA0Q13151 305 aaKnown RBP13.28□□□□□ -0.28
SSBP2-220ENST00000615665 CDKN3Q16667 212 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 LEXMQ3ZCV2 418 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 SYT6Q5T7P8 510 aaPredicted RBP13.28□□□□□ -0.28
SSBP2-220ENST00000615665 OR6Q1Q8NGQ2 317 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 TP53INP1Q96A56 240 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 CMAHPQ9Y471 501 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 NUP214P35658 2090 aaPredicted RBP13.28□□□□□ -0.28
SSBP2-220ENST00000615665 TRBV4-1A0A0J9YWV2 114 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 GASTP01350 101 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 HLA-DQA2P01906 255 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 KRT74Q7RTS7 529 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 OR9A2Q8NGT5 310 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 ZNF563Q8TA94 476 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 SLC38A3Q99624 504 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 ACTRT3Q9BYD9 372 aa13.28□□□□□ -0.28
SSBP2-220ENST00000615665 MRPL39Q9NYK5 338 aaKnown RBP13.28□□□□□ -0.28
SSBP2-220ENST00000615665 C2orf74A8MZ97 194 aa13.27□□□□□ -0.28
SSBP2-220ENST00000615665 CD40LGP29965 261 aa13.27□□□□□ -0.28
SSBP2-220ENST00000615665 RGS6P49758 472 aa13.27□□□□□ -0.28
SSBP2-220ENST00000615665 SLC35F1Q5T1Q4 408 aa13.27□□□□□ -0.28
SSBP2-220ENST00000615665 PRPF38BQ5VTL8 546 aaKnown RBP13.27□□□□□ -0.28
SSBP2-220ENST00000615665 ZNF222Q9UK12 451 aa13.27□□□□□ -0.28
SSBP2-220ENST00000615665 STUB1Q9UNE7 303 aa13.27□□□□□ -0.28
SSBP2-220ENST00000615665 TYRP1P17643 537 aa13.27□□□□□ -0.28
SSBP2-220ENST00000615665 COL9A2Q14055 689 aaPredicted RBP13.27□□□□□ -0.28
SSBP2-220ENST00000615665 C12orf40Q86WS4 652 aa13.27□□□□□ -0.28
SSBP2-220ENST00000615665 ZBTB8BQ8NAP8 495 aaPredicted RBP13.27□□□□□ -0.28
SSBP2-220ENST00000615665 OR2T33Q8NG76 320 aa13.27□□□□□ -0.28
SSBP2-220ENST00000615665 ADAMTS16Q8TE57 1224 aa13.27□□□□□ -0.28
SSBP2-220ENST00000615665 DOK4Q8TEW6 326 aa13.27□□□□□ -0.28
SSBP2-220ENST00000615665 SLC22A4Q9H015 551 aa13.27□□□□□ -0.28
SSBP2-220ENST00000615665 MKKSQ9NPJ1 570 aaPredicted RBP13.27□□□□□ -0.28
SSBP2-220ENST00000615665 THAP10Q9P2Z0 257 aaPredicted RBP13.27□□□□□ -0.28
SSBP2-220ENST00000615665 PCDHGA6Q9Y5G7 932 aa13.27□□□□□ -0.28
SSBP2-220ENST00000615665 CASC3O15234 703 aaKnown RBP13.27□□□□□ -0.29
SSBP2-220ENST00000615665 ITPKBP27987 946 aa13.27□□□□□ -0.29
SSBP2-220ENST00000615665 GP2P55259 537 aaKnown RBP13.27□□□□□ -0.29
SSBP2-220ENST00000615665 RAB30Q15771 203 aa13.27□□□□□ -0.29
SSBP2-220ENST00000615665 IDNKQ5T6J7 187 aa13.27□□□□□ -0.29
SSBP2-220ENST00000615665 TMEM215Q68D42 235 aa13.27□□□□□ -0.29
SSBP2-220ENST00000615665 FAM46AQ96IP4 442 aaKnown RBP13.27□□□□□ -0.29
SSBP2-220ENST00000615665 PINK1Q9BXM7 581 aa13.27□□□□□ -0.29
SSBP2-220ENST00000615665 TAAR2Q9P1P5 351 aa13.27□□□□□ -0.29
SSBP2-220ENST00000615665 ANKMY1Q9P2S6 941 aa13.27□□□□□ -0.29
SSBP2-220ENST00000615665 GRXCR1A8MXD5 290 aa13.27□□□□□ -0.29
SSBP2-220ENST00000615665 ZNF3P17036 446 aa13.27□□□□□ -0.29
SSBP2-220ENST00000615665 GPR4P46093 362 aa13.27□□□□□ -0.29
SSBP2-220ENST00000615665 RAB25P57735 213 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms