RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 PRKAG1P54619 331 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 RRADP55042 308 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 TRMT5Q32P41 509 aaKnown RBP13.69□□□□□ -0.22
CD48-203ENST00000613788 DLEU7Q6UYE1 221 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 DNAJC14Q6Y2X3 702 aaPredicted RBP13.69□□□□□ -0.22
CD48-203ENST00000613788 RNF111Q6ZNA4 994 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 SZRD1Q7Z422 152 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 DHDDSQ86SQ9 333 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 TMEM102Q8N9M5 508 aaPredicted RBP13.69□□□□□ -0.22
CD48-203ENST00000613788 OR52R1Q8NGF1 315 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 NCLNQ969V3 563 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 SLC35A5Q9BS91 424 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 SEMA4CQ9C0C4 833 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 ATP13A2Q9NQ11 1180 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 SLAMF8Q9P0V8 285 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 PRODH2Q9UF12 536 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 POLHQ9Y253 713 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 RAXQ9Y2V3 346 aa13.69□□□□□ -0.22
CD48-203ENST00000613788 RNF103-CHMP3A0A140T963 221 aa13.68□□□□□ -0.22
CD48-203ENST00000613788 UBOX5O94941 541 aa13.68□□□□□ -0.22
CD48-203ENST00000613788 CBX6O95503 412 aa13.68□□□□□ -0.22
CD48-203ENST00000613788 KRT75O95678 551 aa13.68□□□□□ -0.22
CD48-203ENST00000613788 CBX7O95931 251 aa13.68□□□□□ -0.22
CD48-203ENST00000613788 KRT16P08779 473 aa13.68□□□□□ -0.22
CD48-203ENST00000613788 PPIBP23284 216 aaKnown RBP13.68□□□□□ -0.22
CD48-203ENST00000613788 PTPN6P29350 595 aa13.68□□□□□ -0.22
CD48-203ENST00000613788 UCNP55089 124 aa13.68□□□□□ -0.22
CD48-203ENST00000613788 SLC37A1P57057 533 aa13.68□□□□□ -0.22
CD48-203ENST00000613788 CDC20Q12834 499 aa13.68□□□□□ -0.22
CD48-203ENST00000613788 TP53BP2Q13625 1128 aa13.68□□□□□ -0.22
CD48-203ENST00000613788 EXOSC7Q15024 291 aaKnown RBP13.68□□□□□ -0.22
CD48-203ENST00000613788 HSDL2Q6YN16 418 aa13.68□□□□□ -0.22
CD48-203ENST00000613788 SLC29A4Q7RTT9 530 aa13.68□□□□□ -0.22
CD48-203ENST00000613788 C6orf120Q7Z4R8 191 aa13.68□□□□□ -0.22
CD48-203ENST00000613788 PROSER1Q86XN7 944 aa13.68□□□□□ -0.22
CD48-203ENST00000613788 ZNF615Q8N8J6 731 aa13.68□□□□□ -0.22
CD48-203ENST00000613788 APCDD1LQ8NCL9 501 aa13.68□□□□□ -0.22
CD48-203ENST00000613788 OR5AK3PQ8NH89 298 aa13.68□□□□□ -0.22
CD48-203ENST00000613788 ZCCHC14Q8WYQ9 949 aaKnown RBP13.68□□□□□ -0.22
CD48-203ENST00000613788 LRRC58Q96CX6 371 aa13.68□□□□□ -0.22
CD48-203ENST00000613788 NUDT9Q9BW91 350 aa13.68□□□□□ -0.22
CD48-203ENST00000613788 TRIM4Q9C037 500 aa13.68□□□□□ -0.22
CD48-203ENST00000613788 ANKRA2Q9H9E1 313 aa13.68□□□□□ -0.22
CD48-203ENST00000613788 IL1RL2Q9HB29 575 aa13.68□□□□□ -0.22
CD48-203ENST00000613788 MMP25Q9NPA2 562 aa13.68□□□□□ -0.22
CD48-203ENST00000613788 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.68□□□□□ -0.22
CD48-203ENST00000613788 EVPLLA8MZ36 301 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 T-ENOLP0DO92 83 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 CPA2P48052 419 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 NUDT2P50583 147 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 MXRA7P84157 204 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 VAC14Q08AM6 782 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 AIMP2Q13155 320 aaKnown RBP13.67□□□□□ -0.22
CD48-203ENST00000613788 GAB1Q13480 694 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 MYBPC3Q14896 1274 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 DCAF10Q5QP82 559 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 ATP1A1-AS1Q5TC04 95 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 ZCCHC12Q6PEW1 402 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 HACD2Q6Y1H2 254 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 KBTBD2Q8IY47 623 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 ZNF321PQ8N8H1 164 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 CLEC1AQ8NC01 280 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 OR5L2Q8NGL0 311 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 OR8K3Q8NH51 312 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 ELP5Q8TE02 316 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 ZFP90Q8TF47 636 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 NEURL3Q96EH8 262 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 MS4A4EQ96PG1 132 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 CGREF1Q99674 301 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 SH3GL1Q99961 368 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 HOPXQ9BPY8 73 aaPredicted RBP13.67□□□□□ -0.22
CD48-203ENST00000613788 RAD21L1Q9H4I0 556 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 TPT1P8Q9HAU6 139 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 SLC6A13Q9NSD5 602 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 NDE1Q9NXR1 346 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 VAPAQ9P0L0 249 aa13.67□□□□□ -0.22
CD48-203ENST00000613788 FAF1Q9UNN5 650 aaPredicted RBP13.67□□□□□ -0.22
CD48-203ENST00000613788 TRBV5-3A0A0A0MS03 114 aa13.66□□□□□ -0.22
CD48-203ENST00000613788 TTC36A6NLP5 189 aa13.66□□□□□ -0.22
CD48-203ENST00000613788 CLIC1O00299 241 aa13.66□□□□□ -0.22
CD48-203ENST00000613788 ZFAND5O76080 213 aa13.66□□□□□ -0.22
CD48-203ENST00000613788 SOX30O94993 753 aa13.66□□□□□ -0.22
CD48-203ENST00000613788 PSMG1O95456 288 aa13.66□□□□□ -0.22
CD48-203ENST00000613788 HMGN2P05204 90 aaKnown RBP13.66□□□□□ -0.22
CD48-203ENST00000613788 SERPINA7P05543 415 aa13.66□□□□□ -0.22
CD48-203ENST00000613788 HOXB9P17482 250 aaPredicted RBP13.66□□□□□ -0.22
CD48-203ENST00000613788 PRIM2P49643 509 aa13.66□□□□□ -0.22
CD48-203ENST00000613788 EMDP50402 254 aa13.66□□□□□ -0.22
CD48-203ENST00000613788 FOXK2Q01167 660 aa13.66□□□□□ -0.22
CD48-203ENST00000613788 TLE3Q04726 772 aa13.66□□□□□ -0.22
CD48-203ENST00000613788 GTDC1Q4AE62 458 aa13.66□□□□□ -0.22
CD48-203ENST00000613788 RUNDC3AQ59EK9 446 aa13.66□□□□□ -0.22
CD48-203ENST00000613788 HLA-DQA1Q5Y7H0 255 aa13.66□□□□□ -0.22
CD48-203ENST00000613788 SAXO2Q658L1 398 aa13.66□□□□□ -0.22
CD48-203ENST00000613788 ANGPTL8Q6UXH0 198 aa13.66□□□□□ -0.22
CD48-203ENST00000613788 CLEC4FQ8N1N0 589 aa13.66□□□□□ -0.22
CD48-203ENST00000613788 SIMC1Q8NDZ2 872 aa13.66□□□□□ -0.22
CD48-203ENST00000613788 C16orf52Q8NHV5 167 aa13.66□□□□□ -0.22
CD48-203ENST00000613788 ANKRD27Q96NW4 1050 aa13.66□□□□□ -0.22
CD48-203ENST00000613788 DEFB126Q9BYW3 111 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms