RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 PCDHGA10Q9Y5H3 936 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 CD68P34810 354 aaPredicted RBP19.2■□□□□ 0.66
CTDP1-208ENST00000613122 GJA8P48165 433 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 HK3P52790 923 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 MARCH8Q5T0T0 291 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 TIGD4Q8IY51 512 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 NUFIP1Q9UHK0 495 aaKnown RBP19.2■□□□□ 0.66
CTDP1-208ENST00000613122 C17orf105B2RV13 164 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 TUBB3Q13509 450 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 C3orf58Q8NDZ4 430 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 OR13C3Q8NGS6 347 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 HOXB13Q92826 284 aaPredicted RBP19.2■□□□□ 0.66
CTDP1-208ENST00000613122 NAT6Q93015 286 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 STRA6Q9BX79 667 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 IL17CQ9P0M4 197 aa19.2■□□□□ 0.66
CTDP1-208ENST00000613122 CD3GP09693 182 aa19.19■□□□□ 0.66
CTDP1-208ENST00000613122 IL4RP24394 825 aa19.19■□□□□ 0.66
CTDP1-208ENST00000613122 ARHGAP12Q8IWW6 846 aa19.19■□□□□ 0.66
CTDP1-208ENST00000613122 RLN3Q8WXF3 142 aa19.19■□□□□ 0.66
CTDP1-208ENST00000613122 L3HYPDHQ96EM0 354 aa19.19■□□□□ 0.66
CTDP1-208ENST00000613122 ZNF701Q9NV72 531 aaPredicted RBP19.19■□□□□ 0.66
CTDP1-208ENST00000613122 SH3D21A4FU49 640 aa19.19■□□□□ 0.66
CTDP1-208ENST00000613122 ARHGEF15O94989 841 aa19.19■□□□□ 0.66
CTDP1-208ENST00000613122 VNN2O95498 520 aa19.19■□□□□ 0.66
CTDP1-208ENST00000613122 ZNF43P17038 809 aa19.19■□□□□ 0.66
CTDP1-208ENST00000613122 CLCN2P51788 898 aa19.19■□□□□ 0.66
CTDP1-208ENST00000613122 TMEM19Q96HH6 336 aa19.19■□□□□ 0.66
CTDP1-208ENST00000613122 SECISBP2Q96T21 854 aaKnown RBP19.19■□□□□ 0.66
CTDP1-208ENST00000613122 NFS1Q9Y697 457 aa19.19■□□□□ 0.66
CTDP1-208ENST00000613122 SFXN2Q96NB2 322 aa19.19■□□□□ 0.66
CTDP1-208ENST00000613122 URM1Q9BTM9 101 aaKnown RBP19.19■□□□□ 0.66
CTDP1-208ENST00000613122 CCDC106Q9BWC9 280 aa19.19■□□□□ 0.66
CTDP1-208ENST00000613122 HSFX1Q9UBD0 423 aa19.19■□□□□ 0.66
CTDP1-208ENST00000613122 PRSS38A1L453 326 aa19.19■□□□□ 0.66
CTDP1-208ENST00000613122 SLC22A31A6NKX4 558 aa19.19■□□□□ 0.66
CTDP1-208ENST00000613122 GPR4P46093 362 aa19.19■□□□□ 0.66
CTDP1-208ENST00000613122 GPR26Q8NDV2 337 aa19.19■□□□□ 0.66
CTDP1-208ENST00000613122 FKBP10Q96AY3 582 aa19.19■□□□□ 0.66
CTDP1-208ENST00000613122 TAMM41Q96BW9 452 aa19.19■□□□□ 0.66
CTDP1-208ENST00000613122 MS4A4EQ96PG1 132 aa19.19■□□□□ 0.66
CTDP1-208ENST00000613122 ZNF224Q9NZL3 707 aa19.19■□□□□ 0.66
CTDP1-208ENST00000613122 ADAMTS4O75173 837 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 ZNF33BQ06732 778 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 KCTD9Q7L273 389 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 ZNF551Q7Z340 670 aaPredicted RBP19.18■□□□□ 0.66
CTDP1-208ENST00000613122 SCML4Q8N228 414 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 OR8S1Q8NH09 359 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 CDH20Q9HBT6 801 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 GJD2Q9UKL4 321 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 ABCB7O75027 752 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 CELP19835 753 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 ACTA2P62736 377 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 ACTG2P63267 376 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 E2F1Q01094 437 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 BLOC1S3Q6QNY0 202 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 ZNF367Q7RTV3 350 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 CLECL1Q8IZS7 167 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 CNN2Q99439 309 aaKnown RBP19.18■□□□□ 0.66
CTDP1-208ENST00000613122 NRXN3Q9Y4C0 1643 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 SMIM30A4D0T7 59 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 PHYHO14832 338 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 XPNPEP2O43895 674 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 TIMP2P16035 220 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 GSTM2P28161 218 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 GNRHRP30968 328 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 LIPIQ6XZB0 460 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 OR52N2Q8NGI0 321 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 CWH43Q9H720 699 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 SGK494L7N484 410 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 SMAD9O15198 467 aaKnown RBP19.18■□□□□ 0.66
CTDP1-208ENST00000613122 ETFAP13804 333 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 GRPRP30550 384 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 ADH7P40394 386 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 DUS1LQ6P1R4 473 aaKnown RBP19.18■□□□□ 0.66
CTDP1-208ENST00000613122 ZNF773Q6PK81 442 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 CRYGNQ8WXF5 182 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 UGDHO60701 494 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 FMO6PO60774 539 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 RDH16O75452 317 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 PLATP00750 562 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 MSX1P28360 303 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 NADK2Q4G0N4 442 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 MINDY2Q8NBR6 621 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 OR52E1Q8NGJ3 308 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 ENAMQ9NRM1 1142 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 DNMT3BQ9UBC3 853 aaKnown RBP19.18■□□□□ 0.66
CTDP1-208ENST00000613122 BAIAP2Q9UQB8 552 aa19.18■□□□□ 0.66
CTDP1-208ENST00000613122 A0A0A6YYC8 382 aaPredicted RBP19.17■□□□□ 0.66
CTDP1-208ENST00000613122 I3L1I5 382 aaPredicted RBP19.17■□□□□ 0.66
CTDP1-208ENST00000613122 E2F3O00716 465 aa19.17■□□□□ 0.66
CTDP1-208ENST00000613122 THBS2P35442 1172 aa19.17■□□□□ 0.66
CTDP1-208ENST00000613122 FAM78AQ5JUQ0 283 aa19.17■□□□□ 0.66
CTDP1-208ENST00000613122 WDR20Q8TBZ3 569 aa19.17■□□□□ 0.66
CTDP1-208ENST00000613122 MOCOSQ96EN8 888 aa19.17■□□□□ 0.66
CTDP1-208ENST00000613122 WACQ9BTA9 647 aa19.17■□□□□ 0.66
CTDP1-208ENST00000613122 C2orf42Q9NWW7 574 aa19.17■□□□□ 0.66
CTDP1-208ENST00000613122 A0A1B0GVC2 190 aa19.17■□□□□ 0.66
CTDP1-208ENST00000613122 SLC19A2O60779 497 aa19.17■□□□□ 0.66
CTDP1-208ENST00000613122 FRKP42685 505 aaPredicted RBP19.17■□□□□ 0.66
CTDP1-208ENST00000613122 CRISP1P54107 249 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms