RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 CNR1P21554 472 aa6.66□□□□□ -1.34
CBWD1-219ENST00000611457 CA7P43166 264 aa6.66□□□□□ -1.34
CBWD1-219ENST00000611457 SLC37A1P57057 533 aa6.66□□□□□ -1.34
CBWD1-219ENST00000611457 CYP4F2P78329 520 aa6.66□□□□□ -1.34
CBWD1-219ENST00000611457 MRPS22P82650 360 aaKnown RBP6.66□□□□□ -1.34
CBWD1-219ENST00000611457 SLBPQ14493 270 aaKnown RBP eCLIP6.66□□□□□ -1.34
CBWD1-219ENST00000611457 PRICKLE4Q2TBC4 344 aa6.66□□□□□ -1.34
CBWD1-219ENST00000611457 FRG2Q64ET8 278 aa6.66□□□□□ -1.34
CBWD1-219ENST00000611457 CES3Q6UWW8 571 aa6.66□□□□□ -1.34
CBWD1-219ENST00000611457 VASH2Q86V25 355 aa6.66□□□□□ -1.34
CBWD1-219ENST00000611457 OR2L13Q8N349 312 aa6.66□□□□□ -1.34
CBWD1-219ENST00000611457 PAF1Q8N7H5 531 aa6.66□□□□□ -1.34
CBWD1-219ENST00000611457 CHDHQ8NE62 594 aaPredicted RBP6.66□□□□□ -1.34
CBWD1-219ENST00000611457 EFHD2Q96C19 240 aaPredicted RBP6.66□□□□□ -1.34
CBWD1-219ENST00000611457 DUS3LQ96G46 650 aaKnown RBP6.66□□□□□ -1.34
CBWD1-219ENST00000611457 FRG2BQ96QU4 278 aa6.66□□□□□ -1.34
CBWD1-219ENST00000611457 STACQ99469 402 aa6.66□□□□□ -1.34
CBWD1-219ENST00000611457 CTSFQ9UBX1 484 aa6.66□□□□□ -1.34
CBWD1-219ENST00000611457 DOCK10Q96BY6 2186 aa6.66□□□□□ -1.34
CBWD1-219ENST00000611457 ZNF701M0R085 212 aaPredicted RBP6.65□□□□□ -1.34
CBWD1-219ENST00000611457 MASP2O00187 686 aa6.65□□□□□ -1.34
CBWD1-219ENST00000611457 MANBAO00462 879 aa6.65□□□□□ -1.34
CBWD1-219ENST00000611457 LYPLA1O75608 230 aaPredicted RBP6.65□□□□□ -1.34
CBWD1-219ENST00000611457 OXSR1O95747 527 aaPredicted RBP6.65□□□□□ -1.34
CBWD1-219ENST00000611457 TUBA4AP68366 448 aa6.65□□□□□ -1.34
CBWD1-219ENST00000611457 MYBPC1Q00872 1141 aa6.65□□□□□ -1.34
CBWD1-219ENST00000611457 SRSF6Q13247 344 aaKnown RBP6.65□□□□□ -1.34
CBWD1-219ENST00000611457 TGIF1Q15583 401 aa6.65□□□□□ -1.34
CBWD1-219ENST00000611457 KRT80Q6KB66 452 aa6.65□□□□□ -1.34
CBWD1-219ENST00000611457 DCDC5Q6ZRR9 648 aa6.65□□□□□ -1.34
CBWD1-219ENST00000611457 FRA10AC1Q70Z53 315 aa6.65□□□□□ -1.34
CBWD1-219ENST00000611457 GPR141Q7Z602 305 aa6.65□□□□□ -1.34
CBWD1-219ENST00000611457 MILR1Q7Z6M3 343 aa6.65□□□□□ -1.34
CBWD1-219ENST00000611457 NUDCD3Q8IVD9 361 aa6.65□□□□□ -1.34
CBWD1-219ENST00000611457 POU5F2Q8N7G0 328 aa6.65□□□□□ -1.34
CBWD1-219ENST00000611457 TMEM178AQ8NBL3 297 aa6.65□□□□□ -1.34
CBWD1-219ENST00000611457 PPP1R14CQ8TAE6 165 aa6.65□□□□□ -1.34
CBWD1-219ENST00000611457 DAZLQ92904 295 aaKnown RBP6.65□□□□□ -1.34
CBWD1-219ENST00000611457 TESCQ96BS2 214 aa6.65□□□□□ -1.34
CBWD1-219ENST00000611457 ARSGQ96EG1 525 aa6.65□□□□□ -1.34
CBWD1-219ENST00000611457 PLEKHA8Q96JA3 519 aa6.65□□□□□ -1.34
CBWD1-219ENST00000611457 NDEL1Q9GZM8 345 aa6.65□□□□□ -1.34
CBWD1-219ENST00000611457 SAP130Q9H0E3 1048 aa6.65□□□□□ -1.34
CBWD1-219ENST00000611457 PROK2Q9HC23 129 aa6.65□□□□□ -1.34
CBWD1-219ENST00000611457 ZBTB26Q9HCK0 441 aa6.65□□□□□ -1.34
CBWD1-219ENST00000611457 PLAGL1Q9UM63 463 aa6.65□□□□□ -1.34
CBWD1-219ENST00000611457 MRPS18BQ9Y676 258 aaKnown RBP6.65□□□□□ -1.34
CBWD1-219ENST00000611457 NSG1A0A0A6YYJ2 146 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 BANF1O75531 89 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 NTN1O95631 604 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 HEXBP07686 556 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 KITP10721 976 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 GP1BBP13224 206 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 SF3B4Q15427 424 aaKnown RBP eCLIP6.65□□□□□ -1.35
CBWD1-219ENST00000611457 RGS21Q2M5E4 152 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 METTL21CQ5VZV1 264 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 SCIMPQ6UWF3 145 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 RNF111Q6ZNA4 994 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 ANKRD46Q86W74 232 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 ANKMY2Q8IV38 441 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 MISPQ8IVT2 679 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 BCORP1Q8N888 145 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 FAM71CQ8NEG0 241 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 TSPEARQ8WU66 669 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 NXNL1Q96CM4 212 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 CRB3Q9BUF7 120 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 BRINP2Q9C0B6 783 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 ZNF385DQ9H6B1 395 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 THAP1Q9NVV9 213 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 FOXD3Q9UJU5 478 aaPredicted RBP6.65□□□□□ -1.35
CBWD1-219ENST00000611457 MYRFQ9Y2G1 1151 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 AP4S1Q9Y587 144 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 CFAP20Q9Y6A4 193 aaKnown RBP6.65□□□□□ -1.35
CBWD1-219ENST00000611457 CABIN1Q9Y6J0 2220 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 SPACA6W5XKT8 324 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 A0A087WZY1 265 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 OR6C70A6NIJ9 312 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 ZNF195O14628 629 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 TSPAN2O60636 221 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 SNX4O95219 450 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 STAMBPO95630 424 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 SP1P08047 785 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 CPN1P15169 458 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 CHMP24386 653 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 TTKP33981 857 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 PTGDSP41222 190 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 SLC12A2P55011 1212 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 BST1Q10588 318 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 FOXO1Q12778 655 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 AMIGO2Q86SJ2 522 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 DEFB107AQ8IZN7 70 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 CPSF7Q8N684 471 aaKnown RBP6.65□□□□□ -1.35
CBWD1-219ENST00000611457 KCT2Q8NC54 265 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 OR6S1Q8NH40 331 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 FAR1Q8WVX9 515 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 NR4A3Q92570 626 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 UNKQ9C0B0 810 aaKnown RBP6.65□□□□□ -1.35
CBWD1-219ENST00000611457 CALHM2Q9HA72 323 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 NECTIN3Q9NQS3 549 aa6.65□□□□□ -1.35
CBWD1-219ENST00000611457 SUCOQ9UBS9 1254 aaKnown RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms