RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 PROX1Q92786 737 aa14.21□□□□□ -0.13
HIF3A-218ENST00000600383 ANKRD9Q96BM1 317 aaPredicted RBP14.21□□□□□ -0.13
HIF3A-218ENST00000600383 RNF31Q96EP0 1072 aa14.21□□□□□ -0.13
HIF3A-218ENST00000600383 GIMAP5Q96F15 307 aa14.21□□□□□ -0.13
HIF3A-218ENST00000600383 ZNF300Q96RE9 604 aaPredicted RBP14.21□□□□□ -0.13
HIF3A-218ENST00000600383 RSPO3Q9BXY4 272 aaPredicted RBP14.21□□□□□ -0.13
HIF3A-218ENST00000600383 TOR3AQ9H497 397 aa14.21□□□□□ -0.13
HIF3A-218ENST00000600383 CXorf56Q9H5V9 222 aa14.21□□□□□ -0.13
HIF3A-218ENST00000600383 CAPN10Q9HC96 672 aa14.21□□□□□ -0.13
HIF3A-218ENST00000600383 PRDM9Q9NQV7 894 aa14.21□□□□□ -0.13
HIF3A-218ENST00000600383 BATF3Q9NR55 127 aa14.21□□□□□ -0.13
HIF3A-218ENST00000600383 ATXN7L1Q9ULK2 861 aaPredicted RBP14.21□□□□□ -0.13
HIF3A-218ENST00000600383 OR10H2O60403 315 aa14.21□□□□□ -0.13
HIF3A-218ENST00000600383 CHRM4P08173 479 aa14.21□□□□□ -0.13
HIF3A-218ENST00000600383 ITGA2P17301 1181 aa14.21□□□□□ -0.13
HIF3A-218ENST00000600383 FUT5Q11128 374 aa14.21□□□□□ -0.13
HIF3A-218ENST00000600383 STX4Q12846 297 aa14.21□□□□□ -0.13
HIF3A-218ENST00000600383 PUM1Q14671 1186 aaKnown RBP eCLIP14.21□□□□□ -0.13
HIF3A-218ENST00000600383 GRM7Q14831 915 aa14.21□□□□□ -0.13
HIF3A-218ENST00000600383 GUSBP11Q6P575 273 aa14.21□□□□□ -0.13
HIF3A-218ENST00000600383 C16orf62Q7Z3J2 963 aa14.21□□□□□ -0.13
HIF3A-218ENST00000600383 KRT73Q86Y46 540 aa14.21□□□□□ -0.13
HIF3A-218ENST00000600383 EID2Q8N6I1 236 aa14.21□□□□□ -0.13
HIF3A-218ENST00000600383 DTWD2Q8NBA8 298 aa14.21□□□□□ -0.13
HIF3A-218ENST00000600383 SLC35A4Q96G79 324 aa14.21□□□□□ -0.13
HIF3A-218ENST00000600383 MS4A4EQ96PG1 132 aa14.21□□□□□ -0.13
HIF3A-218ENST00000600383 QRSL1Q9H0R6 528 aaKnown RBP14.21□□□□□ -0.13
HIF3A-218ENST00000600383 EPB41L1Q9H4G0 881 aa14.21□□□□□ -0.13
HIF3A-218ENST00000600383 SYNDIG1Q9H7V2 258 aa14.21□□□□□ -0.13
HIF3A-218ENST00000600383 RHCGQ9UBD6 479 aa14.21□□□□□ -0.13
HIF3A-218ENST00000600383 TMEM184BQ9Y519 407 aaPredicted RBP14.21□□□□□ -0.13
HIF3A-218ENST00000600383 PCDHGB3Q9Y5G1 929 aa14.21□□□□□ -0.13
HIF3A-218ENST00000600383 PCDHGA12O60330 932 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 MITFO75030 526 aaPredicted RBP14.2□□□□□ -0.14
HIF3A-218ENST00000600383 NSA2O95478 260 aaKnown RBP14.2□□□□□ -0.14
HIF3A-218ENST00000600383 IFNW1P05000 195 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 ATP1B1P05026 303 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 FOLR1P15328 257 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 FPR1P21462 350 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 MAN2A2P49641 1150 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 CDH12P55289 794 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 BTG2P78543 158 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 SPIBQ01892 262 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 EXOSC7Q15024 291 aaKnown RBP14.2□□□□□ -0.14
HIF3A-218ENST00000600383 ZNF628Q5EBL2 1059 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 ATAD3BQ5T9A4 648 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 GARNL3Q5VVW2 1013 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 MFSD12Q6NUT3 480 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 PRR23CQ6ZRP0 262 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 OR2L13Q8N349 312 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 GPR32P1Q8NGA4 272 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 OR4C6Q8NH72 309 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 VANGL1Q8TAA9 524 aaPredicted RBP14.2□□□□□ -0.14
HIF3A-218ENST00000600383 MIPOL1Q8TD10 442 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 RBM18Q96H35 190 aaKnown RBP14.2□□□□□ -0.14
HIF3A-218ENST00000600383 ZNF285Q96NJ3 590 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 EXD2Q9NVH0 621 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 DNAAF2Q9NVR5 837 aaKnown RBP14.2□□□□□ -0.14
HIF3A-218ENST00000600383 PTGFRNQ9P2B2 879 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 GMEB2Q9UKD1 530 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 ORC6Q9Y5N6 252 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 ADAMTS9Q9P2N4 1935 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 SEC16AO15027 2179 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 TNFRSF11BO00300 401 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 HPRP00739 348 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 CD247P20963 164 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 SOX18P35713 384 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 GNA13Q14344 377 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 NR0B2Q15466 257 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 TRIM61Q5EBN2 209 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 DGAT2L6Q6ZPD8 337 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 KANSL1Q7Z3B3 1105 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 CYP4Z1Q86W10 505 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 LGI4Q8N135 537 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 METTL25Q8N6Q8 603 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 ATG16L2Q8NAA4 619 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 OR51Q1Q8NH59 317 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 CDS1Q92903 461 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 ZG16BQ96DA0 208 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 MUS81Q96NY9 551 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 ZNF347Q96SE7 839 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 CUTCQ9NTM9 273 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 KIF17Q9P2E2 1029 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 DHCR7Q9UBM7 475 aaKnown RBP14.2□□□□□ -0.14
HIF3A-218ENST00000600383 MRPS33Q9Y291 106 aaKnown RBP14.2□□□□□ -0.14
HIF3A-218ENST00000600383 ZNF451Q9Y4E5 1061 aa14.2□□□□□ -0.14
HIF3A-218ENST00000600383 DPPA5A6NC42 116 aa14.19□□□□□ -0.14
HIF3A-218ENST00000600383 DUXAA6NLW8 204 aa14.19□□□□□ -0.14
HIF3A-218ENST00000600383 CLDN4O14493 209 aa14.19□□□□□ -0.14
HIF3A-218ENST00000600383 ADAMDEC1O15204 470 aa14.19□□□□□ -0.14
HIF3A-218ENST00000600383 JRKO75564 520 aa14.19□□□□□ -0.14
HIF3A-218ENST00000600383 TNFAIP8O95379 198 aa14.19□□□□□ -0.14
HIF3A-218ENST00000600383 CT62P0C5K7 136 aa14.19□□□□□ -0.14
HIF3A-218ENST00000600383 POLR2IP36954 125 aaKnown RBP14.19□□□□□ -0.14
HIF3A-218ENST00000600383 XCR1P46094 333 aa14.19□□□□□ -0.14
HIF3A-218ENST00000600383 OR1D4P47884 311 aa14.19□□□□□ -0.14
HIF3A-218ENST00000600383 KCNJ5P48544 419 aa14.19□□□□□ -0.14
HIF3A-218ENST00000600383 DAPP51397 102 aa14.19□□□□□ -0.14
HIF3A-218ENST00000600383 ADARB1P78563 741 aaKnown RBP14.19□□□□□ -0.14
HIF3A-218ENST00000600383 CHRNEQ04844 493 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms