RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 DCAF7P61962 342 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 VSNL1P62760 191 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 KCNJ2P63252 427 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 DUSP2Q05923 314 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 RPS6KA2Q15349 733 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 CEBPEQ15744 281 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 EMC4Q5J8M3 183 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 SPDYAQ5MJ70 313 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 LIPMQ5VYY2 423 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 FAM111BQ6SJ93 734 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 SCIMPQ6UWF3 145 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 TMEM64Q6YI46 380 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 C3P1Q6ZMU1 363 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 TRILQ7L0X0 811 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 CD163Q86VB7 1156 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 CCDC116Q8IYX3 515 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 C4orf33Q8N1A6 199 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 RIBC1Q8N443 379 aaPredicted RBP9.67□□□□□ -0.86
CCDC9-203ENST00000596938 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.67□□□□□ -0.86
CCDC9-203ENST00000596938 SPPL2AQ8TCT8 520 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 ZNF675Q8TD23 568 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 ANGPTL4Q9BY76 406 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 ROPN1BQ9BZX4 212 aaPredicted RBP9.67□□□□□ -0.86
CCDC9-203ENST00000596938 BRINP2Q9C0B6 783 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 C12orf65Q9H3J6 166 aaKnown RBP9.67□□□□□ -0.86
CCDC9-203ENST00000596938 RUBCNLQ9H714 662 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 ROPN1Q9HAT0 212 aaPredicted RBP9.67□□□□□ -0.86
CCDC9-203ENST00000596938 ACKR4Q9NPB9 350 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 MKS1Q9NXB0 559 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 TAS2R7Q9NYW3 318 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 PRODH2Q9UF12 536 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 MID2Q9UJV3 735 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 PLLPQ9Y342 182 aa9.67□□□□□ -0.86
CCDC9-203ENST00000596938 TRGV5A0A0B4J1U4 118 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 TLDC2A0PJX2 215 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 NPIPA2E9PIF3 369 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 NPIPB8E9PQR5 432 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 NPIPA3F8WFD2 350 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 TO15178 435 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 ACOX3O15254 700 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 TRIM13O60858 407 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 RSL1D1O76021 490 aaKnown RBP9.66□□□□□ -0.86
CCDC9-203ENST00000596938 CBX7O95931 251 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 ABCB1P08183 1280 aaPredicted RBP9.66□□□□□ -0.86
CCDC9-203ENST00000596938 HOXD4P09016 255 aaPredicted RBP9.66□□□□□ -0.86
CCDC9-203ENST00000596938 RFPL3SP0C7P2 107 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 ABCD3P28288 659 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 MPIP34949 423 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 EMDP50402 254 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 FBXW4P57775 412 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 RPP38P78345 283 aaKnown RBP9.66□□□□□ -0.86
CCDC9-203ENST00000596938 BTKQ06187 659 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 DUSP8Q13202 625 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 EXOSC7Q15024 291 aaKnown RBP9.66□□□□□ -0.86
CCDC9-203ENST00000596938 TRMT12Q53H54 448 aaKnown RBP9.66□□□□□ -0.86
CCDC9-203ENST00000596938 ZNF628Q5EBL2 1059 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 PRAMEF20Q5VT98 475 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 TMEM198Q66K66 360 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 WDR93Q6P2C0 686 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 TMEM81Q6P7N7 255 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 EMBQ6PCB8 327 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 NUP54Q7Z3B4 507 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 TICAM1Q8IUC6 712 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 MARVELD2Q8N4S9 558 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 BANPQ8N9N5 519 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 CCDC63Q8NA47 563 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 ADCY4Q8NFM4 1077 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 OR5M3Q8NGP4 307 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 DIO2Q92813 273 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 MARVELD3Q96A59 401 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 HSPBAP1Q96EW2 488 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 LCORQ96JN0 433 aaPredicted RBP9.66□□□□□ -0.86
CCDC9-203ENST00000596938 SMC6Q96SB8 1091 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 TRMOQ9BU70 441 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 DOHHQ9BU89 302 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 NXF5Q9H1B4 397 aaKnown RBP9.66□□□□□ -0.86
CCDC9-203ENST00000596938 LDAHQ9H6V9 325 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 ZNF703Q9H7S9 590 aaPredicted RBP9.66□□□□□ -0.86
CCDC9-203ENST00000596938 RRAGDQ9NQL2 400 aaPredicted RBP9.66□□□□□ -0.86
CCDC9-203ENST00000596938 SLC35C2Q9NQQ7 365 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 GIMAP4Q9NUV9 329 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 COQ3Q9NZJ6 369 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 BCAP29Q9UHQ4 241 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 LGALS13Q9UHV8 139 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 DTX4Q9Y2E6 619 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 CCL27Q9Y4X3 112 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 PCDHGB3Q9Y5G1 929 aa9.66□□□□□ -0.86
CCDC9-203ENST00000596938 LRRC3CA6NJW4 275 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 SLC28A1O00337 649 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 ZNF500O60304 480 aaPredicted RBP9.65□□□□□ -0.86
CCDC9-203ENST00000596938 PLOD3O60568 738 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 CRCPO75575 148 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 PPM1BO75688 479 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 FGF4P08620 206 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 CELA3AP09093 270 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 PCSK2P16519 638 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 DDCP20711 480 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 PRPH2P23942 346 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 CASP3P42574 277 aa9.65□□□□□ -0.86
CCDC9-203ENST00000596938 MAN2A2P49641 1150 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms