RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 MLLT11Q13015 90 aaPredicted RBP15.58■□□□□ 0.08
LIG1-206ENST00000594067 C1DQ13901 141 aaKnown RBP15.58■□□□□ 0.08
LIG1-206ENST00000594067 OCLNQ16625 522 aa15.58■□□□□ 0.08
LIG1-206ENST00000594067 FAM209AQ5JX71 171 aa15.58■□□□□ 0.08
LIG1-206ENST00000594067 ZER1Q7Z7L7 766 aa15.58■□□□□ 0.08
LIG1-206ENST00000594067 IQCHQ86VS3 1027 aa15.58■□□□□ 0.08
LIG1-206ENST00000594067 TRIM48Q8IWZ4 208 aa15.58■□□□□ 0.08
LIG1-206ENST00000594067 SLC35G5Q96KT7 338 aa15.58■□□□□ 0.08
LIG1-206ENST00000594067 LRR1Q96L50 414 aa15.58■□□□□ 0.08
LIG1-206ENST00000594067 FRMD6Q96NE9 622 aa15.58■□□□□ 0.08
LIG1-206ENST00000594067 YIPF4Q9BSR8 244 aa15.58■□□□□ 0.08
LIG1-206ENST00000594067 FNDC11Q9BVV2 318 aa15.58■□□□□ 0.08
LIG1-206ENST00000594067 RACGAP1Q9H0H5 632 aa15.58■□□□□ 0.08
LIG1-206ENST00000594067 ACOXLQ9NUZ1 547 aa15.58■□□□□ 0.08
LIG1-206ENST00000594067 TXNL4BQ9NX01 149 aaKnown RBP15.58■□□□□ 0.08
LIG1-206ENST00000594067 SMIM30A4D0T7 59 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 FAM25AB3EWG3 89 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 FAM25CB3EWG5 89 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 FAM25GB3EWG6 89 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 PLA2G10O15496 165 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 OR1F1O43749 312 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 TBX19O60806 448 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 LGI1O95970 557 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 LINC00271P0C7V0 271 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 GPC1P35052 558 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 FRKP42685 505 aaPredicted RBP15.57■□□□□ 0.08
LIG1-206ENST00000594067 PRKAG1P54619 331 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 HOXC5Q00444 222 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 MADCAM1Q13477 382 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.57■□□□□ 0.082e-7■■□□□ 13.2
LIG1-206ENST00000594067 ATAT1Q5SQI0 421 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 ZNF765Q7L2R6 523 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 GRASPQ7Z6J2 395 aaPredicted RBP15.57■□□□□ 0.08
LIG1-206ENST00000594067 AMZ2Q86W34 360 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 NUDT13Q86X67 352 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 TBC1D19Q8N5T2 526 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 OR4K5Q8NGD3 323 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 GRPEL2Q8TAA5 225 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 DIRAS2Q96HU8 199 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 RNF121Q9H920 327 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 PELI2Q9HAT8 420 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 RPRD1BQ9NQG5 326 aaKnown RBP15.57■□□□□ 0.08
LIG1-206ENST00000594067 P2RX2Q9UBL9 471 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 YARS2Q9Y2Z4 477 aaKnown RBP15.57■□□□□ 0.08
LIG1-206ENST00000594067 LRRK1Q38SD2 2015 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 ERVH48-1M5A8F1 160 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 NDUFS4O43181 175 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 PRKRAO75569 313 aaKnown RBP15.57■□□□□ 0.08
LIG1-206ENST00000594067 EPHX1P07099 455 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 MLLT3P42568 568 aaPredicted RBP15.57■□□□□ 0.08
LIG1-206ENST00000594067 CCR8P51685 355 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 SMIM11AP58511 58 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 FLYWCH1Q4VC44 716 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 SYT14P1Q58G82 188 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 C9orf64Q5T6V5 341 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 C22orf42Q6IC83 251 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 UBE3DQ7Z6J8 389 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 C11orf74Q86VG3 221 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 UBE2J2Q8N2K1 259 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 GDPD1Q8N9F7 314 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 JPH3Q8WXH2 748 aaPredicted RBP15.57■□□□□ 0.08
LIG1-206ENST00000594067 ZDHHC4Q9NPG8 344 aa15.57■□□□□ 0.08
LIG1-206ENST00000594067 AGRPO00253 132 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 VEGFDO43915 354 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 TMCC2O75069 709 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 IL1AP01583 271 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 ALPPL2P10696 532 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 CEBPBP17676 345 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 SLC6A11P48066 632 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 MNX1P50219 401 aaPredicted RBP15.56■□□□□ 0.08
LIG1-206ENST00000594067 DPTQ07507 201 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 HNRNPA0Q13151 305 aaKnown RBP15.56■□□□□ 0.08
LIG1-206ENST00000594067 ADCK2Q7Z695 626 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 CADM2Q8N3J6 435 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 FAM26EQ8N5C1 309 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 NATD1Q8N6N6 113 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 OR8D1Q8WZ84 308 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 OTUB2Q96DC9 234 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 ZNF582Q96NG8 517 aaPredicted RBP15.56■□□□□ 0.08
LIG1-206ENST00000594067 NELL2Q99435 816 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 POLDIP3Q9BY77 421 aaKnown RBP15.56■□□□□ 0.08
LIG1-206ENST00000594067 GLIPR2Q9H4G4 154 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 TMA7Q9Y2S6 64 aaKnown RBP15.56■□□□□ 0.08
LIG1-206ENST00000594067 SPIN1Q9Y657 262 aaPredicted RBP15.56■□□□□ 0.08
LIG1-206ENST00000594067 GLOD5A6NK44 160 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 LCMT2O60294 686 aaKnown RBP15.56■□□□□ 0.08
LIG1-206ENST00000594067 FGF19O95750 216 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 RAB36O95755 333 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 PDZK1Q5T2W1 519 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 OR2G6Q5TZ20 316 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 RNLSQ5VYX0 342 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 SFTPA1Q8IWL2 248 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 CLDN22Q8N7P3 220 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 OR6T1Q8NGN1 323 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 UBASH3BQ8TF42 649 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 TRIM63Q969Q1 353 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 RGMAQ96B86 450 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 QRFPRQ96P65 431 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 MAN2C1Q9NTJ4 1040 aa15.56■□□□□ 0.08
LIG1-206ENST00000594067 ZCCHC3Q9NUD5 404 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms