RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 UNC79Q9P2D8 2635 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 OR6C76A6NM76 312 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 A8MVJ9 347 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 NPIPB8E9PQR5 432 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 TYROBPO43914 113 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 TRIM13O60858 407 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 SPAG7O75391 227 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 UNC5CO95185 931 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 ATP1B1P05026 303 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 TUBBP07437 444 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 IL3P08700 152 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 PORP16435 677 aaPredicted RBP10.35□□□□□ -0.75
SMAD4-211ENST00000590499 S1PR1P21453 382 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 PRPH2P23942 346 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 SERPINB3P29508 390 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 ALDH3A1P30838 453 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 SSTR4P31391 388 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 ETV4P43268 484 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 MEOX1P50221 254 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 ACSM2AQ08AH3 577 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 MGAT2Q10469 447 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 ASPHQ12797 758 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 TNFAIP8L3Q5GJ75 292 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 ACSM2BQ68CK6 577 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 CRYBG3Q68DQ2 2970 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 RNF111Q6ZNA4 994 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 RNF165Q6ZSG1 346 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 SULF2Q8IWU5 870 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 CHERPQ8IWX8 916 aaKnown RBP10.35□□□□□ -0.75
SMAD4-211ENST00000590499 GALNT12Q8IXK2 581 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 ZNF615Q8N8J6 731 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 ZFP62Q8NB50 900 aaPredicted RBP10.35□□□□□ -0.75
SMAD4-211ENST00000590499 POGLUT1Q8NBL1 392 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 FAM98AQ8NCA5 519 aaKnown RBP10.35□□□□□ -0.75
SMAD4-211ENST00000590499 PSD4Q8NDX1 1056 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.35□□□□□ -0.75
SMAD4-211ENST00000590499 SSC4DQ8WTU2 575 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 CTHRC1Q96CG8 243 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 CNRIP1Q96F85 164 aaPredicted RBP10.35□□□□□ -0.75
SMAD4-211ENST00000590499 GPR137Q96N19 417 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 MECRQ9BV79 373 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 FAIM2Q9BWQ8 316 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 KRTAP4-7Q9BYR0 210 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 SHCBP1LQ9BZQ2 653 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 WWTR1Q9GZV5 400 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 IQCGQ9H095 443 aaKnown RBP10.35□□□□□ -0.75
SMAD4-211ENST00000590499 SH2D2AQ9NP31 389 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.35□□□□□ -0.75
SMAD4-211ENST00000590499 HPF1Q9NWY4 346 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 SEC14L3Q9UDX4 400 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 OSGIN2Q9Y236 505 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 SLC5A6Q9Y289 635 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 DLGAP4Q9Y2H0 992 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 NAV2Q8IVL1 2488 aa10.35□□□□□ -0.75
SMAD4-211ENST00000590499 NCOA6Q14686 2063 aaPredicted RBP10.34□□□□□ -0.75
SMAD4-211ENST00000590499 A0A0G2JMM0 328 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 A0A1W2PPB8 328 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 A0A1W2PRS3 328 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 GOLGA6L10A6NI86 522 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 KIR3DP1A8MWS1 328 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 AZIN1O14977 448 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 PEX1O43933 1283 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 NPHS1O60500 1241 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 RSL1D1O76021 490 aaKnown RBP10.34□□□□□ -0.75
SMAD4-211ENST00000590499 GHRHP01286 108 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 UROSP10746 265 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 DRD2P14416 443 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 ZNF24P17028 368 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 ARRB2P32121 409 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 ALDH6A1Q02252 535 aaKnown RBP10.34□□□□□ -0.75
SMAD4-211ENST00000590499 DUSP8Q13202 625 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 KIAA0040Q15053 153 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 CEBPEQ15744 281 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 PRICKLE4Q2TBC4 344 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 ZNF791Q3KP31 576 aaPredicted RBP10.34□□□□□ -0.75
SMAD4-211ENST00000590499 KRT71Q3SY84 523 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 KANK2Q63ZY3 851 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 CLEC6AQ6EIG7 209 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 OPN5Q6U736 354 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 IL20RBQ6UXL0 311 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 GFRALQ6UXV0 394 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 RTL4Q6ZR62 310 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 SLC15A4Q8N697 577 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 GOLM1Q8NBJ4 401 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 OR7G1Q8NGA0 311 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 OR6Y1Q8NGX8 325 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 C16orf52Q8NHV5 167 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 C16orf78Q8WTQ4 265 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 KLHL29Q96CT2 875 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 SGCZQ96LD1 299 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 SMC6Q96SB8 1091 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 EBPLQ9BY08 206 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 TUBB1Q9H4B7 451 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 MAT2BQ9NZL9 334 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 EHD3Q9NZN3 535 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 SENP1Q9P0U3 644 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 ZNF639Q9UID6 485 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 ERVK-11Q9UQG0 969 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 PTGDR2Q9Y5Y4 395 aa10.34□□□□□ -0.75
SMAD4-211ENST00000590499 GNG14A0A1W2PPG7 69 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms