RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 DCST1Q5T197 706 aa12.93□□□□□ -0.34
ERCC1-205ENST00000587888 FAM111BQ6SJ93 734 aa12.93□□□□□ -0.34
ERCC1-205ENST00000587888 ANGPTL8Q6UXH0 198 aa12.93□□□□□ -0.34
ERCC1-205ENST00000587888 CCDC91Q7Z6B0 441 aa12.93□□□□□ -0.34
ERCC1-205ENST00000587888 YRDCQ86U90 279 aaKnown RBP12.93□□□□□ -0.34
ERCC1-205ENST00000587888 KIF18BQ86Y91 864 aa12.93□□□□□ -0.34
ERCC1-205ENST00000587888 PTGR2Q8N8N7 351 aaPredicted RBP12.93□□□□□ -0.34
ERCC1-205ENST00000587888 OR7G1Q8NGA0 311 aa12.93□□□□□ -0.34
ERCC1-205ENST00000587888 OR52B6Q8NGF0 335 aa12.93□□□□□ -0.34
ERCC1-205ENST00000587888 TMEM41AQ96HV5 264 aa12.93□□□□□ -0.34
ERCC1-205ENST00000587888 SECISBP2Q96T21 854 aaKnown RBP12.93□□□□□ -0.34
ERCC1-205ENST00000587888 BRINP2Q9C0B6 783 aa12.93□□□□□ -0.34
ERCC1-205ENST00000587888 NXF5Q9H1B4 397 aaKnown RBP12.93□□□□□ -0.34
ERCC1-205ENST00000587888 AHSPQ9NZD4 102 aa12.93□□□□□ -0.34
ERCC1-205ENST00000587888 BCAP29Q9UHQ4 241 aa12.93□□□□□ -0.34
ERCC1-205ENST00000587888 FOXD3Q9UJU5 478 aaPredicted RBP12.93□□□□□ -0.34
ERCC1-205ENST00000587888 DTX4Q9Y2E6 619 aa12.93□□□□□ -0.34
ERCC1-205ENST00000587888 KIAA1549Q9HCM3 1950 aa12.92□□□□□ -0.34
ERCC1-205ENST00000587888 SPG11Q96JI7 2443 aa12.92□□□□□ -0.34
ERCC1-205ENST00000587888 CCDC189A1A4V9 331 aa12.92□□□□□ -0.34
ERCC1-205ENST00000587888 ERAL1O75616 437 aaKnown RBP12.92□□□□□ -0.34
ERCC1-205ENST00000587888 HOXB4P17483 251 aaPredicted RBP12.92□□□□□ -0.34
ERCC1-205ENST00000587888 S1PR1P21453 382 aa12.92□□□□□ -0.34
ERCC1-205ENST00000587888 GPX3P22352 226 aa12.92□□□□□ -0.34
ERCC1-205ENST00000587888 PTPN6P29350 595 aa12.92□□□□□ -0.34
ERCC1-205ENST00000587888 FEN1P39748 380 aaKnown RBP12.92□□□□□ -0.34
ERCC1-205ENST00000587888 MAPK12P53778 367 aa12.92□□□□□ -0.34
ERCC1-205ENST00000587888 ADAM8P78325 824 aa12.92□□□□□ -0.34
ERCC1-205ENST00000587888 SRYQ05066 204 aa12.92□□□□□ -0.34
ERCC1-205ENST00000587888 KEAP1Q14145 624 aa12.92□□□□□ -0.34
ERCC1-205ENST00000587888 EXOSC7Q15024 291 aaKnown RBP12.92□□□□□ -0.34
ERCC1-205ENST00000587888 NHSL2Q5HYW2 709 aa12.92□□□□□ -0.34
ERCC1-205ENST00000587888 FRG2Q64ET8 278 aa12.92□□□□□ -0.34
ERCC1-205ENST00000587888 TIGD3Q6B0B8 471 aa12.92□□□□□ -0.34
ERCC1-205ENST00000587888 PLD6Q8N2A8 252 aaKnown RBP12.92□□□□□ -0.34
ERCC1-205ENST00000587888 FAM83FQ8NEG4 500 aaPredicted RBP12.92□□□□□ -0.34
ERCC1-205ENST00000587888 ADCY4Q8NFM4 1077 aa12.92□□□□□ -0.34
ERCC1-205ENST00000587888 RDH11Q8TC12 318 aa12.92□□□□□ -0.34
ERCC1-205ENST00000587888 NSUN5Q96P11 429 aaKnown RBP12.92□□□□□ -0.34
ERCC1-205ENST00000587888 FRG2BQ96QU4 278 aa12.92□□□□□ -0.34
ERCC1-205ENST00000587888 NODALQ96S42 347 aa12.92□□□□□ -0.34
ERCC1-205ENST00000587888 CALHM2Q9HA72 323 aa12.92□□□□□ -0.34
ERCC1-205ENST00000587888 IKBKGQ9Y6K9 419 aa12.92□□□□□ -0.34
ERCC1-205ENST00000587888 MBD3L4A6NDZ8 208 aaPredicted RBP12.91□□□□□ -0.34
ERCC1-205ENST00000587888 MBD3L3A6NE82 208 aaPredicted RBP12.91□□□□□ -0.34
ERCC1-205ENST00000587888 MBD3L5A6NJ08 208 aaPredicted RBP12.91□□□□□ -0.34
ERCC1-205ENST00000587888 CD8B2A6NJW9 211 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 ICOSLGO75144 302 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 PPM1BO75688 479 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 SEMA3DO95025 777 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 ALDOAP04075 364 aaKnown RBP12.91□□□□□ -0.34
ERCC1-205ENST00000587888 CYP4B1P13584 511 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 CASQ1P31415 396 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 OPRM1P35372 400 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 SOX18P35713 384 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 SERPINB8P50452 374 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 SLC7A5Q01650 507 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 IFT88Q13099 833 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 RCAN2Q14206 197 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 TECRLQ5HYJ1 363 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 FAM180BQ6P0A1 224 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 METTL2BQ6P1Q9 378 aaKnown RBP12.91□□□□□ -0.34
ERCC1-205ENST00000587888 PLXDC2Q6UX71 529 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 PAGE2Q7Z2X7 111 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 NUP54Q7Z3B4 507 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 CAMKMTQ7Z624 323 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 MILR1Q7Z6M3 343 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 MMP21Q8N119 569 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 VWA5B2Q8N398 1253 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 C9orf106Q8NAJ2 232 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 SIMC1Q8NDZ2 872 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 C17orf47Q8NEP4 570 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 MBD3L2Q8NHZ7 208 aaPredicted RBP12.91□□□□□ -0.34
ERCC1-205ENST00000587888 OMA1Q96E52 524 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 ALPK1Q96QP1 1244 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 YIPF4Q9BSR8 244 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 NTMT1Q9BV86 223 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 ITPAQ9BY32 194 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 GALNT9Q9HCQ5 603 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 FARSBQ9NSD9 589 aaKnown RBP12.91□□□□□ -0.34
ERCC1-205ENST00000587888 EHD3Q9NZN3 535 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 ADAM29Q9UKF5 820 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 SLC12A4Q9UP95 1085 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 MAPRE3Q9UPY8 281 aa12.91□□□□□ -0.34
ERCC1-205ENST00000587888 SETD2Q9BYW2 2564 aaPredicted RBP12.91□□□□□ -0.34
ERCC1-205ENST00000587888 ESYT3A0FGR9 886 aa12.9□□□□□ -0.34
ERCC1-205ENST00000587888 GUCY1B2O75343 617 aa12.9□□□□□ -0.34
ERCC1-205ENST00000587888 ACTL6AO96019 429 aa12.9□□□□□ -0.34
ERCC1-205ENST00000587888 RAF1P04049 648 aa12.9□□□□□ -0.34
ERCC1-205ENST00000587888 TMIGD3P0DMS9 266 aaPredicted RBP12.9□□□□□ -0.34
ERCC1-205ENST00000587888 NAGAP17050 411 aa12.9□□□□□ -0.34
ERCC1-205ENST00000587888 CSNK2A2P19784 350 aaPredicted RBP12.9□□□□□ -0.34
ERCC1-205ENST00000587888 GCKP35557 465 aa12.9□□□□□ -0.34
ERCC1-205ENST00000587888 SLCO1A2P46721 670 aa12.9□□□□□ -0.34
ERCC1-205ENST00000587888 ALDH9A1P49189 494 aa12.9□□□□□ -0.34
ERCC1-205ENST00000587888 MGAT2Q10469 447 aa12.9□□□□□ -0.34
ERCC1-205ENST00000587888 MAP4K2Q12851 820 aa12.9□□□□□ -0.34
ERCC1-205ENST00000587888 FOXF2Q12947 444 aa12.9□□□□□ -0.34
ERCC1-205ENST00000587888 POU4F3Q15319 338 aa12.9□□□□□ -0.34
ERCC1-205ENST00000587888 PRICKLE4Q2TBC4 344 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms