RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 VNN3Q9NY84 501 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 NDUFAF4Q9P032 175 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 SEC14L3Q9UDX4 400 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 ATXN7L1Q9ULK2 861 aaPredicted RBP18.59■□□□□ 0.57
TRIM47-204ENST00000587339 A0A087WV62 115 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 MAGEA13PA6NCF6 341 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 PLOD3O60568 738 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 NME6O75414 186 aaPredicted RBP18.59■□□□□ 0.57
TRIM47-204ENST00000587339 CPNE6O95741 557 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 MSL3P1P0C860 447 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 ITGA2P17301 1181 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 SOX18P35713 384 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 FUT5Q11128 374 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 ANGPT1Q15389 498 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 GPAT3Q53EU6 434 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 ATAD3BQ5T9A4 648 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 SIMC1Q8NDZ2 872 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 OR1L3Q8NH93 324 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 BBS10Q8TAM1 723 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 ZNF675Q8TD23 568 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 RBM4BQ9BQ04 359 aaKnown RBP18.59■□□□□ 0.57
TRIM47-204ENST00000587339 RBM4Q9BWF3 364 aaKnown RBP18.59■□□□□ 0.57
TRIM47-204ENST00000587339 GTPBP2Q9BX10 602 aaKnown RBP18.59■□□□□ 0.57
TRIM47-204ENST00000587339 REEP1Q9H902 201 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 BCL2L10Q9HD36 194 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 IFT80Q9P2H3 777 aaPredicted RBP18.59■□□□□ 0.57
TRIM47-204ENST00000587339 SERTAD3Q9UJW9 196 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 C19orf53Q9UNZ5 99 aaPredicted RBP18.59■□□□□ 0.57
TRIM47-204ENST00000587339 SAMHD1Q9Y3Z3 626 aaKnown RBP18.59■□□□□ 0.57
TRIM47-204ENST00000587339 TMEM184BQ9Y519 407 aaPredicted RBP18.59■□□□□ 0.57
TRIM47-204ENST00000587339 KCNE3Q9Y6H6 103 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 OR10H2O60403 315 aa18.58■□□□□ 0.56
TRIM47-204ENST00000587339 DPM1O60762 260 aa18.58■□□□□ 0.56
TRIM47-204ENST00000587339 CTNSO60931 367 aa18.58■□□□□ 0.56
TRIM47-204ENST00000587339 HPRP00739 348 aa18.58■□□□□ 0.56
TRIM47-204ENST00000587339 RPLP0P05388 317 aaKnown RBP18.58■□□□□ 0.56
TRIM47-204ENST00000587339 ALAS2P22557 587 aa18.58■□□□□ 0.56
TRIM47-204ENST00000587339 DNAJA1P31689 397 aaKnown RBP18.58■□□□□ 0.56
TRIM47-204ENST00000587339 PPP2R2BQ00005 443 aa18.58■□□□□ 0.56
TRIM47-204ENST00000587339 STX4Q12846 297 aa18.58■□□□□ 0.56
TRIM47-204ENST00000587339 FHL5Q5TD97 284 aa18.58■□□□□ 0.56
TRIM47-204ENST00000587339 CHERPQ8IWX8 916 aaKnown RBP18.58■□□□□ 0.56
TRIM47-204ENST00000587339 UNC13CQ8NB66 2214 aa18.58■□□□□ 0.56
TRIM47-204ENST00000587339 SLC16A11Q8NCK7 471 aa18.58■□□□□ 0.56
TRIM47-204ENST00000587339 OR51Q1Q8NH59 317 aa18.58■□□□□ 0.56
TRIM47-204ENST00000587339 MVB12AQ96EY5 273 aa18.58■□□□□ 0.56
TRIM47-204ENST00000587339 ZNF347Q96SE7 839 aa18.58■□□□□ 0.56
TRIM47-204ENST00000587339 OSBPL10Q9BXB5 764 aa18.58■□□□□ 0.56
TRIM47-204ENST00000587339 PRTFDC1Q9NRG1 225 aa18.58■□□□□ 0.56
TRIM47-204ENST00000587339 THSD1Q9NS62 852 aa18.58■□□□□ 0.56
TRIM47-204ENST00000587339 FGF21Q9NSA1 209 aa18.58■□□□□ 0.56
TRIM47-204ENST00000587339 UBAP1Q9NZ09 502 aa18.58■□□□□ 0.56
TRIM47-204ENST00000587339 MAT2BQ9NZL9 334 aa18.58■□□□□ 0.56
TRIM47-204ENST00000587339 LIPT1Q9Y234 373 aa18.58■□□□□ 0.56
TRIM47-204ENST00000587339 GPC6Q9Y625 555 aaPredicted RBP18.58■□□□□ 0.56
TRIM47-204ENST00000587339 WDFY4Q6ZS81 3184 aa18.58■□□□□ 0.56
TRIM47-204ENST00000587339 ADAMTS9Q9P2N4 1935 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 A0A1W2PQM1 296 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 SNAP29O95721 258 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 AGR2O95994 175 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 FESP07332 822 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 LYNP07948 512 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 CHRM4P08173 479 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 PRKACGP22612 351 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 AVPR2P30518 371 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 MAPK10P53779 464 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 ERV3-1Q14264 604 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 CDC73Q6P1J9 531 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 ZNF574Q6ZN55 896 aaPredicted RBP18.57■□□□□ 0.56
TRIM47-204ENST00000587339 TMPRSS9Q7Z410 1059 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 WDR53Q7Z5U6 358 aaPredicted RBP18.57■□□□□ 0.56
TRIM47-204ENST00000587339 TSEN54Q7Z6J9 526 aaKnown RBP18.57■□□□□ 0.56
TRIM47-204ENST00000587339 DOK4Q8TEW6 326 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 SLC9A6Q92581 669 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 PROX1Q92786 737 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 ZNF300Q96RE9 604 aaPredicted RBP18.57■□□□□ 0.56
TRIM47-204ENST00000587339 NDC1Q9BTX1 674 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 SPATA5L1Q9BVQ7 753 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 ANKRD60Q9BZ19 345 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 SMURF2Q9HAU4 748 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 ADAP2Q9NPF8 381 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 EXD2Q9NVH0 621 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 NDOR1Q9UHB4 597 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 MAU2Q9Y6X3 613 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 RP1P56715 2156 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 SPTBP11277 2137 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 SCN2AQ99250 2005 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 A0A0G2JPF8 293 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 PRAMEF25A6NGN4 478 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 VGLL3A8MV65 326 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 HNRNPCL2B2RXH8 293 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 HNRNPCL3B7ZW38 293 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 ADAMDEC1O15204 470 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 H6PDO95479 791 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 IFI6P09912 130 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 HNRNPCL4P0DMR1 293 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 ETS2P15036 469 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 CD247P20963 164 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 FPR1P21462 350 aa18.57■□□□□ 0.56
TRIM47-204ENST00000587339 XCR1P46094 333 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms