RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 MARCH5Q9NX47 278 aa10.03□□□□□ -0.8
RNF43-207ENST00000583753 IQCMA0A1B0GVH7 501 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 ZC3H12DA2A288 527 aaKnown RBP10.02□□□□□ -0.81
RNF43-207ENST00000583753 PSMD9O00233 223 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 FAAHO00519 579 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 IGLV3-27P01718 113 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 RPLP2P05387 115 aaKnown RBP10.02□□□□□ -0.81
RNF43-207ENST00000583753 GYPBP06028 91 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 UQCRC2P22695 453 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 HLA-FP30511 346 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 LIM2P55344 173 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 PLBD1Q6P4A8 553 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 TMEM107Q6UX40 140 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 SYT9Q86SS6 491 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 SERPINA12Q8IW75 414 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 OR4N5Q8IXE1 308 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 RAB42Q8N4Z0 105 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 GDPD1Q8N9F7 314 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 OR9A1PQ8NGU1 263 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 GRHL3Q8TE85 626 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 TFGQ92734 400 aaPredicted RBP10.02□□□□□ -0.81
RNF43-207ENST00000583753 TADA1Q96BN2 335 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 MAP6Q96JE9 813 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 OR4K3Q96R72 315 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 GABARAPL3Q9BY60 117 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 BHLHE41Q9C0J9 482 aaPredicted RBP10.02□□□□□ -0.81
RNF43-207ENST00000583753 SRRQ9GZT4 340 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 SPNS1Q9H2V7 528 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 Q9Y3F1 56 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 ZNF646O15015 1829 aaPredicted RBP10.02□□□□□ -0.81
RNF43-207ENST00000583753 POLR1CO15160 346 aaPredicted RBP10.02□□□□□ -0.81
RNF43-207ENST00000583753 TYRP14679 529 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 STOMP27105 288 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 RFX2P48378 723 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 CLCNKAP51800 687 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 PPP3R1P63098 170 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 GALK2Q01415 458 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 BCL2A1Q16548 175 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 CXXC5Q7LFL8 322 aaKnown RBP10.02□□□□□ -0.81
RNF43-207ENST00000583753 CPOQ8IVL8 374 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 CDK20Q8IZL9 346 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 OR52I1Q8NGK6 324 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 BCL7CQ8WUZ0 217 aaPredicted RBP10.02□□□□□ -0.81
RNF43-207ENST00000583753 LINC01599Q8WXQ3 324 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 SMPDL3AQ92484 453 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 RFT1Q96AA3 541 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 TIFAQ96CG3 184 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 DDX31Q9H8H2 851 aaKnown RBP10.02□□□□□ -0.81
RNF43-207ENST00000583753 SH2B3Q9UQQ2 575 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 NTNG1Q9Y2I2 539 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 IRAK3Q9Y616 596 aa10.02□□□□□ -0.81
RNF43-207ENST00000583753 A0A0G2JMP0 313 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 A0A0X1KG70 313 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 LEFTY2O00292 366 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 RNASET2O00584 256 aaKnown RBP10.01□□□□□ -0.81
RNF43-207ENST00000583753 GAPDHSO14556 408 aaPredicted RBP10.01□□□□□ -0.81
RNF43-207ENST00000583753 PI15O43692 258 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 GATBO75879 557 aaKnown RBP10.01□□□□□ -0.81
RNF43-207ENST00000583753 SRPRAP08240 638 aaKnown RBP10.01□□□□□ -0.81
RNF43-207ENST00000583753 SLC35G4P0C7Q5 338 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 ARSBP15848 533 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 DNASE1P24855 282 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 PTPN6P29350 595 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 DDOSTP39656 456 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 ANXA11P50995 505 aaKnown RBP10.01□□□□□ -0.81
RNF43-207ENST00000583753 TGM3Q08188 693 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 MGAT3Q09327 533 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 ZXDCQ2QGD7 858 aaPredicted RBP10.01□□□□□ -0.81
RNF43-207ENST00000583753 AKIRIN2Q53H80 203 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 FAM27D1Q5T7N8 215 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 PIP5KL1Q5T9C9 394 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 SLC36A4Q6YBV0 504 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 CEACAM19Q7Z692 300 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 FAM109AQ8N4B1 249 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 OR4M2Q8NGB6 313 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 CEP76Q8TAP6 659 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 CLSTN3Q9BQT9 956 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 SPATA5L1Q9BVQ7 753 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 C3orf14Q9HBI5 128 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 CNOT2Q9NZN8 540 aaKnown RBP10.01□□□□□ -0.81
RNF43-207ENST00000583753 NEUROG3Q9Y4Z2 214 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 INSL5Q9Y5Q6 135 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 PPM1DO15297 605 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 MRPS14O60783 128 aaKnown RBP10.01□□□□□ -0.81
RNF43-207ENST00000583753 ZNF821O75541 412 aaPredicted RBP10.01□□□□□ -0.81
RNF43-207ENST00000583753 C8AP07357 584 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 ACP5P13686 325 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 ELAVL4P26378 380 aaKnown RBP10.01□□□□□ -0.81
RNF43-207ENST00000583753 VIPR1P32241 457 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 PYCR1P32322 319 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 ACSL1P33121 698 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 RPL4P36578 427 aaKnown RBP10.01□□□□□ -0.81
RNF43-207ENST00000583753 CLDN2P57739 230 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 WDR5P61964 334 aaKnown RBP10.01□□□□□ -0.81
RNF43-207ENST00000583753 GPR50Q13585 617 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.01□□□□□ -0.817e-12■■■■□ 23.4
RNF43-207ENST00000583753 ESPNLQ6ZVH7 1005 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 NRMQ8IXM6 262 aa10.01□□□□□ -0.81
RNF43-207ENST00000583753 FAM98AQ8NCA5 519 aaKnown RBP10.01□□□□□ -0.81
RNF43-207ENST00000583753 PROKR2Q8NFJ6 384 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms