RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 C8orf82Q6P1X6 216 aaPredicted RBP14.45□□□□□ -0.1
SS18-216ENST00000580751 RBM15BQ8NDT2 890 aaKnown RBP14.45□□□□□ -0.1
SS18-216ENST00000580751 SLC2A12Q8TD20 617 aa14.45□□□□□ -0.1
SS18-216ENST00000580751 ELP5Q8TE02 316 aa14.45□□□□□ -0.1
SS18-216ENST00000580751 GTF2H4Q92759 462 aa14.45□□□□□ -0.1
SS18-216ENST00000580751 VPS33AQ96AX1 596 aa14.45□□□□□ -0.1
SS18-216ENST00000580751 FBXL20Q96IG2 436 aa14.45□□□□□ -0.1
SS18-216ENST00000580751 CCDC115Q96NT0 180 aa14.45□□□□□ -0.1
SS18-216ENST00000580751 SH3GL1Q99961 368 aa14.45□□□□□ -0.1
SS18-216ENST00000580751 OR8D2Q9GZM6 311 aa14.45□□□□□ -0.1
SS18-216ENST00000580751 CXorf21Q9HAI6 301 aa14.45□□□□□ -0.1
SS18-216ENST00000580751 SH3BP4Q9P0V3 963 aa14.45□□□□□ -0.1
SS18-216ENST00000580751 MAP10Q9P2G4 905 aa14.45□□□□□ -0.1
SS18-216ENST00000580751 PCDHGA9Q9Y5G4 932 aaKnown RBP14.45□□□□□ -0.1
SS18-216ENST00000580751 CHD6Q8TD26 2715 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 A0A096LPI6 279 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 A6NL46 340 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 MYO1GB0I1T2 1018 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 PDPK1O15530 556 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 SCN2BO60939 215 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 SLITRK5O94991 958 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 KCNH1O95259 989 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 DDAH2O95865 285 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 CELA2AP08217 269 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 IFI6P09912 130 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 ZCCHC18P0CG32 403 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 LAMP1P11279 417 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 GPR143P51810 404 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 DGKQP52824 942 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 WNT3P56703 355 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 KCNAB2Q13303 367 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 LINC00303Q3SY05 128 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 AGAP7PQ5VUJ5 663 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 FAM180BQ6P0A1 224 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 RETREG3Q86VR2 466 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 SLC5A8Q8N695 610 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 APCDD1LQ8NCL9 501 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 FDCSPQ8NFU4 85 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 OR7A2PQ8NGA2 310 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 OR1N1Q8NGS0 311 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 GOT1L1Q8NHS2 421 aaPredicted RBP14.44□□□□□ -0.1
SS18-216ENST00000580751 ZFP28Q8NHY6 868 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 OR5P2Q8WZ92 322 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 NCLNQ969V3 563 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 LRRC58Q96CX6 371 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 ZBED6CLQ96FA7 236 aaPredicted RBP14.44□□□□□ -0.1
SS18-216ENST00000580751 WBP1Q96G27 269 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 AGAP4Q96P64 663 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 PHF12Q96QT6 1004 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 GPATCH1Q9BRR8 931 aaKnown RBP14.44□□□□□ -0.1
SS18-216ENST00000580751 CNPPD1Q9BV87 410 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 SEMA4CQ9C0C4 833 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 NEUROD4Q9HD90 331 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 TEKT2Q9UIF3 430 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 PCDHGB4Q9UN71 923 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 ATRXP46100 2492 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 CROCCQ5TZA2 2017 aa14.44□□□□□ -0.1
SS18-216ENST00000580751 FAM208BQ5VWN6 2430 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 TRBV11-1A0A0K0K1C0 115 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 ASPDHA6ND91 283 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 DNAJA2O60884 412 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 IGKV3-11P04433 115 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 FAM87AP0C7U9 286 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 ITGAMP11215 1152 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 SFTPCP11686 197 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 MAGEA8P43361 318 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 CPA2P48052 419 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 NCBP2P52298 156 aaKnown RBP eCLIP14.43□□□□□ -0.11e-8■■■□□ 16.9
SS18-216ENST00000580751 PHC1P78364 1004 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 RAPSNQ13702 412 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 NFYCQ13952 458 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 ZNF267Q14586 743 aaPredicted RBP14.43□□□□□ -0.1
SS18-216ENST00000580751 CRB2Q5IJ48 1285 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 ANKRD26P1Q6NSI1 321 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 HSDL2Q6YN16 418 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 DGAT2L6Q6ZPD8 337 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 RINLQ6ZS11 566 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 CCDC116Q8IYX3 515 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 VWA5B2Q8N398 1253 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 TRIML2Q8N7C3 387 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 SUN3Q8TAQ9 357 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 ZNF675Q8TD23 568 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 BRIX1Q8TDN6 353 aaKnown RBP14.43□□□□□ -0.1
SS18-216ENST00000580751 SENP5Q96HI0 755 aaPredicted RBP14.43□□□□□ -0.1
SS18-216ENST00000580751 RAB3IPQ96QF0 476 aaPredicted RBP14.43□□□□□ -0.1
SS18-216ENST00000580751 NPAS2Q99743 824 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 DEFB126Q9BYW3 111 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 SPAG4Q9NPE6 437 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 ERVK-19Q9WJR5 959 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 PCDHGB7Q9Y5F8 929 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 DOCK10Q96BY6 2186 aa14.43□□□□□ -0.1
SS18-216ENST00000580751 RFXANKO14593 260 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 GSC2O15499 205 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 CD1EP15812 388 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 PPIBP23284 216 aaKnown RBP14.42□□□□□ -0.1
SS18-216ENST00000580751 DUSP2Q05923 314 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 FUT7Q11130 342 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 MAP4K2Q12851 820 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 PRSS53Q2L4Q9 553 aa14.42□□□□□ -0.1
SS18-216ENST00000580751 PRICKLE4Q2TBC4 344 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms