RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 MBD3L2Q8NHZ7 208 aaPredicted RBP16.36■□□□□ 0.21
MKS1-209ENST00000580127 WDYHV1Q96HA8 205 aa16.36■□□□□ 0.21
MKS1-209ENST00000580127 UGT2B28Q9BY64 529 aa16.36■□□□□ 0.21
MKS1-209ENST00000580127 ADAM29Q9UKF5 820 aa16.36■□□□□ 0.21
MKS1-209ENST00000580127 WASHC1A8K0Z3 465 aa16.35■□□□□ 0.21
MKS1-209ENST00000580127 FAM171A2A8MVW0 826 aa16.35■□□□□ 0.21
MKS1-209ENST00000580127 PGRMC2O15173 223 aa16.35■□□□□ 0.21
MKS1-209ENST00000580127 CBR3O75828 277 aa16.35■□□□□ 0.21
MKS1-209ENST00000580127 TMIGD3P0DMS9 266 aaPredicted RBP16.35■□□□□ 0.21
MKS1-209ENST00000580127 NT5EP21589 574 aa16.35■□□□□ 0.21
MKS1-209ENST00000580127 MAGEA4P43358 317 aa16.35■□□□□ 0.21
MKS1-209ENST00000580127 CPA2P48052 419 aa16.35■□□□□ 0.21
MKS1-209ENST00000580127 DIO3P55073 304 aa16.35■□□□□ 0.21
MKS1-209ENST00000580127 DLG1Q12959 904 aa16.35■□□□□ 0.21
MKS1-209ENST00000580127 GAB1Q13480 694 aa16.35■□□□□ 0.21
MKS1-209ENST00000580127 WIPI1Q5MNZ9 446 aaPredicted RBP16.35■□□□□ 0.21
MKS1-209ENST00000580127 POMZP3Q6PJE2 187 aa16.35■□□□□ 0.21
MKS1-209ENST00000580127 CCDC25Q86WR0 208 aa16.35■□□□□ 0.21
MKS1-209ENST00000580127 LINC01560Q8TB33 94 aa16.35■□□□□ 0.21
MKS1-209ENST00000580127 DACH2Q96NX9 599 aa16.35■□□□□ 0.21
MKS1-209ENST00000580127 EIF3LQ9Y262 564 aaKnown RBP16.35■□□□□ 0.21
MKS1-209ENST00000580127 RPH3AQ9Y2J0 694 aaPredicted RBP16.35■□□□□ 0.21
MKS1-209ENST00000580127 CLCA1A8K7I4 914 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 GNB5O14775 395 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 ACOX3O15254 700 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 PPM1BO75688 479 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 ATE1O95260 518 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 ABCB1P08183 1280 aaPredicted RBP16.34■□□□□ 0.21
MKS1-209ENST00000580127 RHOXF2BP0C7M4 288 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 MTHFD2P13995 350 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 CPMP14384 443 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 CPN1P15169 458 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 ABCD3P28288 659 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 ADSLP30566 484 aaPredicted RBP16.34■□□□□ 0.21
MKS1-209ENST00000580127 NEK2P51955 445 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 WNT3P56703 355 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 GPX6P59796 221 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 DCAF7P61962 342 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 EIPR1Q53HC9 387 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 CCNYL2Q5T2Q4 361 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 BICRALQ6AI39 1079 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 ANGPTL8Q6UXH0 198 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 GOLGA7Q7Z5G4 137 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 ZNF615Q8N8J6 731 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 TRPC4APQ8TEL6 797 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 FBF1Q8TES7 1133 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 ADIPOR1Q96A54 375 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 C18orf12Q96KH6 178 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 SFXN3Q9BWM7 321 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 RBM24Q9BX46 236 aaKnown RBP16.34■□□□□ 0.21
MKS1-209ENST00000580127 ZNF717Q9BY31 904 aaPredicted RBP16.34■□□□□ 0.21
MKS1-209ENST00000580127 RAB17Q9H0T7 212 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 PIGMQ9H3S5 423 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 GSX1Q9H4S2 264 aaPredicted RBP16.34■□□□□ 0.21
MKS1-209ENST00000580127 DLL4Q9NR61 685 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 BEX4Q9NWD9 120 aaPredicted RBP16.34■□□□□ 0.21
MKS1-209ENST00000580127 NMRK1Q9NWW6 199 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 BCAP29Q9UHQ4 241 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 TMCO1Q9UM00 188 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 RNF11Q9Y3C5 154 aa16.34■□□□□ 0.21
MKS1-209ENST00000580127 FLNAP21333 2647 aaKnown RBP16.34■□□□□ 0.21
MKS1-209ENST00000580127 DOCK7Q96N67 2140 aa16.33■□□□□ 0.21
MKS1-209ENST00000580127 KLHL2O95198 593 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 GBAP04062 536 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 CLPSP04118 112 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 C2P06681 752 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 KLK1P06870 262 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 CSNK2A2P19784 350 aaPredicted RBP16.33■□□□□ 0.2
MKS1-209ENST00000580127 CHMP24386 653 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 PTPN6P29350 595 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 CCNG1P51959 295 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 AGFG1P52594 562 aaKnown RBP16.33■□□□□ 0.2
MKS1-209ENST00000580127 MAPK12P53778 367 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 NAGLUP54802 743 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 PLTPP55058 493 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 IFT88Q13099 833 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 FNDC7Q5VTL7 733 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 SHEQ5VZ18 495 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 FRG2Q64ET8 278 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 TMEM81Q6P7N7 255 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 MMP21Q8N119 569 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 VWA5B2Q8N398 1253 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 FAM83FQ8NEG4 500 aaPredicted RBP16.33■□□□□ 0.2
MKS1-209ENST00000580127 OR14L1PQ8NHC6 308 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 WDR20Q8TBZ3 569 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 KCTD4Q8WVF5 259 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 WNT2BQ93097 391 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 UCN3Q969E3 161 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 NTNG2Q96CW9 530 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 TMCO6Q96DC7 493 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 FRG2BQ96QU4 278 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 PLEKHF2Q9H8W4 249 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 KLRF1Q9NZS2 232 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 JKAMPQ9P055 326 aa16.33■□□□□ 0.2
MKS1-209ENST00000580127 CPSF2Q9P2I0 782 aaKnown RBP16.33■□□□□ 0.2
MKS1-209ENST00000580127 EXO1Q9UQ84 846 aaKnown RBP16.33■□□□□ 0.2
MKS1-209ENST00000580127 C1orf226A1L170 272 aa16.32■□□□□ 0.2
MKS1-209ENST00000580127 H0Y3Z8 333 aa16.32■□□□□ 0.2
MKS1-209ENST00000580127 ICOSLGO75144 302 aa16.32■□□□□ 0.2
MKS1-209ENST00000580127 RCBTB2O95199 551 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms