RNA–Protein interactions for RNA: ENST00000578397.5

PSMD11-207, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 1,178 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-207ENST00000578397 SPPL2AQ8TCT8 520 aa12.8□□□□□ -0.36
PSMD11-207ENST00000578397 CHTF18Q8WVB6 975 aa12.8□□□□□ -0.36
PSMD11-207ENST00000578397 ZNF597Q96LX8 424 aa12.8□□□□□ -0.36
PSMD11-207ENST00000578397 JSRP1Q96MG2 331 aaPredicted RBP12.8□□□□□ -0.36
PSMD11-207ENST00000578397 FAM215AQ9Y5M1 114 aa12.8□□□□□ -0.36
PSMD11-207ENST00000578397 CSMD1Q96PZ7 3565 aa12.8□□□□□ -0.36
PSMD11-207ENST00000578397 FAM90A27PA6NNH2 459 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 MANBAO00462 879 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 CDH16O75309 829 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 ULK1O75385 1050 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 ERAL1O75616 437 aaKnown RBP12.79□□□□□ -0.36
PSMD11-207ENST00000578397 GSTA1P08263 222 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 GLI4P10075 376 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 KRT15P19012 456 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 ENDOUP21128 410 aaKnown RBP12.79□□□□□ -0.36
PSMD11-207ENST00000578397 FEN1P39748 380 aaKnown RBP12.79□□□□□ -0.36
PSMD11-207ENST00000578397 ZFP36L2P47974 494 aaKnown RBP12.79□□□□□ -0.36
PSMD11-207ENST00000578397 PRKAA2P54646 552 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 FBXW4P57775 412 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 TFF3Q07654 80 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 MGAT2Q10469 447 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 PRICKLE4Q2TBC4 344 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 C1orf185Q5T7R7 199 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 RTL6Q6ICC9 239 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 TMEM64Q6YI46 380 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 GPRIN3Q6ZVF9 776 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 LIX1Q8N485 282 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 CDYL2Q8N8U2 506 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 GBP7Q8N8V2 638 aaPredicted RBP12.79□□□□□ -0.36
PSMD11-207ENST00000578397 METTL6Q8TCB7 284 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 ANGPTL4Q9BY76 406 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 UCK2Q9BZX2 261 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 SLC24A3Q9HC58 644 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 MCCC2Q9HCC0 563 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 MAT2BQ9NZL9 334 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 SPRR3Q9UBC9 169 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 TNFRSF10DQ9UBN6 386 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 ZNF639Q9UID6 485 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 MCM8Q9UJA3 840 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 ZNF780BQ9Y6R6 833 aa12.79□□□□□ -0.36
PSMD11-207ENST00000578397 CCDC168Q8NDH2 2452 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 CCDC151A5D8V7 595 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 NKX2-6A6NCS4 301 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 ACOX3O15254 700 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 ENO1P06733 434 aaKnown RBP12.78□□□□□ -0.36
PSMD11-207ENST00000578397 GPX3P22352 226 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 GDF1P27539 372 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 ABCD3P28288 659 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 MSX1P28360 303 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 HMOX2P30519 316 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 CASP3P42574 277 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 PKNOX1P55347 436 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 DCAF7P61962 342 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 TLE4Q04727 773 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 SLC29A2Q14542 456 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 RIPPLY2Q5TAB7 128 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 TMEM81Q6P7N7 255 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 FAM111BQ6SJ93 734 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 SAMD14Q8IZD0 417 aaPredicted RBP12.78□□□□□ -0.36
PSMD11-207ENST00000578397 CTHRC1Q96CG8 243 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 KLHL29Q96CT2 875 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 L3HYPDHQ96EM0 354 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 HSPBAP1Q96EW2 488 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 ZNF681Q96N22 645 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 RILPQ96NA2 401 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 TMEM237Q96Q45 408 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 HBEGFQ99075 208 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 TXLNGYQ9BZA5 131 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 BRINP2Q9C0B6 783 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 NXF5Q9H1B4 397 aaKnown RBP12.78□□□□□ -0.36
PSMD11-207ENST00000578397 SLC6A15Q9H2J7 730 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 ALKBH4Q9NXW9 302 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 PSMC3IPQ9P2W1 217 aaPredicted RBP12.78□□□□□ -0.36
PSMD11-207ENST00000578397 DCDC2Q9UHG0 476 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 BCAP29Q9UHQ4 241 aa12.78□□□□□ -0.36
PSMD11-207ENST00000578397 AHRRA9YTQ3 701 aa12.77□□□□□ -0.37
PSMD11-207ENST00000578397 PPM1BO75688 479 aa12.77□□□□□ -0.37
PSMD11-207ENST00000578397 BCAS2O75934 225 aaPredicted RBP12.77□□□□□ -0.37
PSMD11-207ENST00000578397 LRATO95237 230 aa12.77□□□□□ -0.37
PSMD11-207ENST00000578397 ESRRBO95718 433 aa12.77□□□□□ -0.37
PSMD11-207ENST00000578397 ABCB1P08183 1280 aaPredicted RBP12.77□□□□□ -0.37
PSMD11-207ENST00000578397 FAM153BP0C7A2 387 aa12.77□□□□□ -0.37
PSMD11-207ENST00000578397 DRD2P14416 443 aa12.77□□□□□ -0.37
PSMD11-207ENST00000578397 MASP1P48740 699 aa12.77□□□□□ -0.37
PSMD11-207ENST00000578397 ALDH9A1P49189 494 aa12.77□□□□□ -0.37
PSMD11-207ENST00000578397 CDK9P50750 372 aaKnown RBP12.77□□□□□ -0.37
PSMD11-207ENST00000578397 LCP2Q13094 533 aa12.77□□□□□ -0.37
PSMD11-207ENST00000578397 SLC25A35Q3KQZ1 300 aa12.77□□□□□ -0.37
PSMD11-207ENST00000578397 FAM153CQ494X1 144 aa12.77□□□□□ -0.37
PSMD11-207ENST00000578397 SPIN4Q56A73 249 aa12.77□□□□□ -0.37
PSMD11-207ENST00000578397 TCHHL1Q5QJ38 904 aaPredicted RBP12.77□□□□□ -0.37
PSMD11-207ENST00000578397 NUP54Q7Z3B4 507 aa12.77□□□□□ -0.37
PSMD11-207ENST00000578397 DMRTC2Q8IXT2 367 aaPredicted RBP12.77□□□□□ -0.37
PSMD11-207ENST00000578397 ULK2Q8IYT8 1036 aa12.77□□□□□ -0.37
PSMD11-207ENST00000578397 CLYBLQ8N0X4 340 aa12.77□□□□□ -0.37
PSMD11-207ENST00000578397 MMP21Q8N119 569 aa12.77□□□□□ -0.37
PSMD11-207ENST00000578397 NTNG2Q96CW9 530 aa12.77□□□□□ -0.37
PSMD11-207ENST00000578397 ERP27Q96DN0 273 aa12.77□□□□□ -0.37
PSMD11-207ENST00000578397 CCDC126Q96EE4 140 aa12.77□□□□□ -0.37
PSMD11-207ENST00000578397 CNRIP1Q96F85 164 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms