RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 SLC6A5Q9Y345 797 aa12.99□□□□□ -0.33
SMARCD2-205ENST00000577686 UTP11Q9Y3A2 253 aaKnown RBP12.99□□□□□ -0.33
SMARCD2-205ENST00000577686 GNB5O14775 395 aa12.98□□□□□ -0.33
SMARCD2-205ENST00000577686 ACOX3O15254 700 aa12.98□□□□□ -0.33
SMARCD2-205ENST00000577686 TMPRSS11DO60235 418 aa12.98□□□□□ -0.33
SMARCD2-205ENST00000577686 EEDO75530 441 aaKnown RBP12.98□□□□□ -0.33
SMARCD2-205ENST00000577686 PPM1BO75688 479 aa12.98□□□□□ -0.33
SMARCD2-205ENST00000577686 CHMP24386 653 aa12.98□□□□□ -0.33
SMARCD2-205ENST00000577686 ABCD3P28288 659 aa12.98□□□□□ -0.33
SMARCD2-205ENST00000577686 BSGP35613 385 aa12.98□□□□□ -0.33
SMARCD2-205ENST00000577686 PSPHP78330 225 aa12.98□□□□□ -0.33
SMARCD2-205ENST00000577686 IFT88Q13099 833 aa12.98□□□□□ -0.33
SMARCD2-205ENST00000577686 GTF2H2Q13888 395 aa12.98□□□□□ -0.33
SMARCD2-205ENST00000577686 PFKFB4Q16877 469 aa12.98□□□□□ -0.33
SMARCD2-205ENST00000577686 GTF2H2CQ6P1K8 395 aa12.98□□□□□ -0.33
SMARCD2-205ENST00000577686 ANGPTL8Q6UXH0 198 aa12.98□□□□□ -0.33
SMARCD2-205ENST00000577686 CCDC25Q86WR0 208 aa12.98□□□□□ -0.33
SMARCD2-205ENST00000577686 MMP21Q8N119 569 aa12.98□□□□□ -0.33
SMARCD2-205ENST00000577686 VWA5B2Q8N398 1253 aa12.98□□□□□ -0.33
SMARCD2-205ENST00000577686 DOK4Q8TEW6 326 aa12.98□□□□□ -0.33
SMARCD2-205ENST00000577686 SMPDL3BQ92485 455 aa12.98□□□□□ -0.33
SMARCD2-205ENST00000577686 WDYHV1Q96HA8 205 aa12.98□□□□□ -0.33
SMARCD2-205ENST00000577686 RAB17Q9H0T7 212 aa12.98□□□□□ -0.33
SMARCD2-205ENST00000577686 TP73O15350 636 aa12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 CBR3O75828 277 aa12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 CPMP14384 443 aa12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 CPN1P15169 458 aa12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 PORP16435 677 aaPredicted RBP12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 PTPN6P29350 595 aa12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 XKP51811 444 aa12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 CCNG1P51959 295 aa12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 WNT3P56703 355 aa12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 PLCXD2Q0VAA5 305 aa12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 EIPR1Q53HC9 387 aa12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 WIPI1Q5MNZ9 446 aaPredicted RBP12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 AAGABQ6PD74 315 aa12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 TMEM64Q6YI46 380 aa12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 GOLGA7Q7Z5G4 137 aa12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 RNF175Q8N4F7 328 aa12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 GBP7Q8N8V2 638 aaPredicted RBP12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 L3MBTL4Q8NA19 623 aa12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 FAM83FQ8NEG4 500 aaPredicted RBP12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 OR14L1PQ8NHC6 308 aa12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 LINC01560Q8TB33 94 aa12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 NXNL1Q96CM4 212 aa12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 TMCO6Q96DC7 493 aa12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 BRINP2Q9C0B6 783 aa12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 NMRK1Q9NWW6 199 aa12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 JKAMPQ9P055 326 aa12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 CPSF2Q9P2I0 782 aaKnown RBP12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 PRODH2Q9UF12 536 aa12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 BCAP29Q9UHQ4 241 aa12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 RPH3AQ9Y2J0 694 aaPredicted RBP12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 ABCA2Q9BZC7 2435 aa12.97□□□□□ -0.33
SMARCD2-205ENST00000577686 C1orf226A1L170 272 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 SH3D21A4FU49 640 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 SNPHO15079 494 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 ABCB7O75027 752 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 CLPSP04118 112 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 INHBBP09529 407 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 GPX3P22352 226 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 KRT20P35900 424 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 MAPK12P53778 367 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 NKX6-1P78426 367 aaPredicted RBP12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 LTBQ06643 244 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 DLG1Q12959 904 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 CCNYL2Q5T2Q4 361 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 FRG2Q64ET8 278 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 BICRALQ6AI39 1079 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 POMZP3Q6PJE2 187 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 CHMP1BQ7LBR1 199 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 IFNEQ86WN2 208 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 P3H2Q8IVL5 708 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 PRR22Q8IZ63 422 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 ZNF615Q8N8J6 731 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 WDR20Q8TBZ3 569 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 FBF1Q8TES7 1133 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 KCTD4Q8WVF5 259 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 WNT2BQ93097 391 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 ADIPOR1Q96A54 375 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 LCORQ96JN0 433 aaPredicted RBP12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 FRG2BQ96QU4 278 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 FAIM2Q9BWQ8 316 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 ZNF717Q9BY31 904 aaPredicted RBP12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 GSX1Q9H4S2 264 aaPredicted RBP12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 ZNF395Q9H8N7 513 aaPredicted RBP12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 PACSIN3Q9UKS6 424 aa12.96□□□□□ -0.33
SMARCD2-205ENST00000577686 ABCA4P78363 2273 aa12.95□□□□□ -0.34
SMARCD2-205ENST00000577686 PRAMEF25A6NGN4 478 aa12.95□□□□□ -0.34
SMARCD2-205ENST00000577686 BCAS2O75934 225 aaPredicted RBP12.95□□□□□ -0.34
SMARCD2-205ENST00000577686 KLHL2O95198 593 aa12.95□□□□□ -0.34
SMARCD2-205ENST00000577686 RCBTB2O95199 551 aa12.95□□□□□ -0.34
SMARCD2-205ENST00000577686 ABCB1P08183 1280 aaPredicted RBP12.95□□□□□ -0.34
SMARCD2-205ENST00000577686 MTHFD2P13995 350 aa12.95□□□□□ -0.34
SMARCD2-205ENST00000577686 CSNK2A2P19784 350 aaPredicted RBP12.95□□□□□ -0.34
SMARCD2-205ENST00000577686 PHBP35232 272 aa12.95□□□□□ -0.34
SMARCD2-205ENST00000577686 MAGEA4P43358 317 aa12.95□□□□□ -0.34
SMARCD2-205ENST00000577686 SERPINB8P50452 374 aa12.95□□□□□ -0.34
SMARCD2-205ENST00000577686 AGFG1P52594 562 aaKnown RBP12.95□□□□□ -0.34
SMARCD2-205ENST00000577686 NAGLUP54802 743 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms