RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 ZKSCAN8Q15776 578 aaPredicted RBP2.06□□□□□ -2.08
COPS3-213ENST00000577210 GPAT3Q53EU6 434 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 HERC4Q5GLZ8 1057 aaPredicted RBP2.06□□□□□ -2.08
COPS3-213ENST00000577210 NKAIN2Q5VXU1 208 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 RHBDD2Q6NTF9 364 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 SLC25A24Q6NUK1 477 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 AFTPHQ6ULP2 937 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 KDELC1Q6UW63 502 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 Q6ZRG5 221 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 RGS9BPQ6ZS82 235 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 NUFIP2Q7Z417 695 aaKnown RBP2.06□□□□□ -2.08
COPS3-213ENST00000577210 GPR142Q7Z601 462 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 SYVN1Q86TM6 617 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 RANBP3LQ86VV4 465 aaPredicted RBP2.06□□□□□ -2.08
COPS3-213ENST00000577210 AMZ2Q86W34 360 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 MARCH9Q86YJ5 346 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 Q8N377 158 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 LRRC17Q8N6Y2 441 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 POM121L12Q8N7R1 296 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.06□□□□□ -2.08
COPS3-213ENST00000577210 OR52B4Q8NGK2 314 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 GPR148Q8TDV2 347 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 PHYHIPQ92561 330 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 THRSPQ92748 146 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 GPR137Q96N19 417 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 TAAR6Q96RI8 345 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 TNFRSF13CQ96RJ3 184 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 ATOH8Q96SQ7 321 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 ERP44Q9BS26 406 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 FUNDC2Q9BWH2 189 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 FTHL17Q9BXU8 183 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 TMEM231Q9H6L2 316 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 HPS4Q9NQG7 708 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 SLC7A10Q9NS82 523 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 ABCC13Q9NSE7 274 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 PAK5Q9P286 719 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 EIF3KQ9UBQ5 218 aaKnown RBP2.06□□□□□ -2.08
COPS3-213ENST00000577210 IL20RAQ9UHF4 553 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 NARFQ9UHQ1 456 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 SLC9A8Q9Y2E8 581 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 RRP15Q9Y3B9 282 aaKnown RBP2.06□□□□□ -2.08
COPS3-213ENST00000577210 OR1A2Q9Y585 309 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 CSAG2Q9Y5P2 127 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 MMP24Q9Y5R2 645 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 CPQQ9Y646 472 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 AFF2P51816 1311 aa2.06□□□□□ -2.08
COPS3-213ENST00000577210 A0A087WZY1 265 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 A0A1W2PPR1 153 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 LOC390937A0A1W2PQ73 354 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 SH3PXD2BA1X283 911 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 SHISA7A6NL88 538 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 KRTAP16-1A8MUX0 517 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 H0YCG3 227 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 RIPK2O43353 540 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 LRP3O75074 770 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 CSO75390 466 aaKnown RBP2.05□□□□□ -2.08
COPS3-213ENST00000577210 SYNGR4O95473 234 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 MBD3O95983 291 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 FCGR3AP08637 254 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 HOXD4P09016 255 aaPredicted RBP2.05□□□□□ -2.08
COPS3-213ENST00000577210 H2AFZP0C0S5 128 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 PRG2P13727 222 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 ACADSP16219 412 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 CCND2P30279 289 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 ELK3P41970 407 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 MATKP42679 507 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 TRPC1P48995 793 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 SLC7A2P52569 658 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 RAG2P55895 527 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 PEX3P56589 373 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 OVGP1Q12889 678 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 SCGB2A2Q13296 93 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 SLC17A1Q14916 467 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 P2RY14Q15391 338 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 CNPY1Q3B7I2 92 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 SNAI3Q3KNW1 292 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 MAJINQ3KP22 176 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 ZNF506Q5JVG8 444 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 RSBN1Q5VWQ0 802 aaPredicted RBP2.05□□□□□ -2.08
COPS3-213ENST00000577210 LIPKQ5VXJ0 399 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 CDC42EP5Q6NZY7 148 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 ARMCX5Q6P1M9 558 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 EMBQ6PCB8 327 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 GPRIN3Q6ZVF9 776 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 PPP1R42Q7Z4L9 355 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 RPAINQ86UA6 219 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 SLC25A42Q86VD7 318 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 SLC47A2Q86VL8 602 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 KCNMB4Q86W47 210 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 ERICH1Q86X53 443 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 KRTAP7-1Q8IUC3 87 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 SLC39A11Q8N1S5 342 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 RNF148Q8N7C7 305 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 MLKLQ8NB16 471 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 RELL2Q8NC24 303 aaPredicted RBP2.05□□□□□ -2.08
COPS3-213ENST00000577210 GMCL1P1Q8NEA9 526 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 OR1K1Q8NGR3 316 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 C11orf45Q8TAV5 145 aa2.05□□□□□ -2.08
COPS3-213ENST00000577210 MRPL24Q96A35 216 aaKnown RBP2.05□□□□□ -2.08
COPS3-213ENST00000577210 RAB7BQ96AH8 199 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms