RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 SCN2AQ99250 2005 aa27.29■■□□□ 1.96
CTDNEP1-208ENST00000573600 PLOD3O60568 738 aa27.28■■□□□ 1.96
CTDNEP1-208ENST00000573600 TNFAIP8O95379 198 aa27.28■■□□□ 1.96
CTDNEP1-208ENST00000573600 FESP07332 822 aa27.28■■□□□ 1.96
CTDNEP1-208ENST00000573600 OR1E2P47887 323 aa27.28■■□□□ 1.96
CTDNEP1-208ENST00000573600 KCNJ5P48544 419 aa27.28■■□□□ 1.96
CTDNEP1-208ENST00000573600 ADARB1P78563 741 aaKnown RBP27.28■■□□□ 1.96
CTDNEP1-208ENST00000573600 COL9A2Q14055 689 aaPredicted RBP27.28■■□□□ 1.96
CTDNEP1-208ENST00000573600 GK3PQ14409 553 aa27.28■■□□□ 1.96
CTDNEP1-208ENST00000573600 FHL5Q5TD97 284 aa27.28■■□□□ 1.96
CTDNEP1-208ENST00000573600 MMABQ96EY8 250 aaPredicted RBP27.28■■□□□ 1.96
CTDNEP1-208ENST00000573600 COL21A1Q96P44 957 aa27.28■■□□□ 1.96
CTDNEP1-208ENST00000573600 ANKRA2Q9H9E1 313 aa27.28■■□□□ 1.96
CTDNEP1-208ENST00000573600 C3orf18Q9UK00 162 aa27.28■■□□□ 1.96
CTDNEP1-208ENST00000573600 SH3GLB1Q9Y371 365 aa27.28■■□□□ 1.96
CTDNEP1-208ENST00000573600 DNAJB5O75953 348 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 OR2B3O76000 313 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 IFNW1P05000 195 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 TNFRSF1BP20333 461 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 RRM2P31350 389 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 FUT5Q11128 374 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 SQSTM1Q13501 440 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 PRICKLE4Q2TBC4 344 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 GPAT3Q53EU6 434 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 TRNT1Q96Q11 434 aaKnown RBP27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 CAPN10Q9HC96 672 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 PNPLA3Q9NST1 481 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 GIN1Q9NXP7 522 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 TMEM9Q9P0T7 183 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 FAM32AQ9Y421 112 aaKnown RBP27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 ENPP4Q9Y6X5 453 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 ARID1BQ8NFD5 2236 aaPredicted RBP27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 CLDN4O14493 209 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 TOX3O15405 576 aaPredicted RBP27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 HS6ST1O60243 411 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 CTNSO60931 367 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 MSL3P1P0C860 447 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 PRKACGP22612 351 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 RAD23AP54725 363 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 KCNAB1Q14722 419 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 SNAP47Q5SQN1 464 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 SHISA5Q8N114 240 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 OTUB1Q96FW1 271 aaPredicted RBP27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 PEX11GQ96HA9 241 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 ZNF354BQ96LW1 612 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 AMBRA1Q9C0C7 1298 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 FSCN3Q9NQT6 498 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 PDP2Q9P2J9 529 aa27.27■■□□□ 1.96
CTDNEP1-208ENST00000573600 PRAMEF25A6NGN4 478 aa27.26■■□□□ 1.95
CTDNEP1-208ENST00000573600 TMEM150CB9EJG8 249 aa27.26■■□□□ 1.95
CTDNEP1-208ENST00000573600 H3BMH7 237 aa27.26■■□□□ 1.95
CTDNEP1-208ENST00000573600 CHRM4P08173 479 aa27.26■■□□□ 1.95
CTDNEP1-208ENST00000573600 TRMT12Q53H54 448 aaKnown RBP27.26■■□□□ 1.95
CTDNEP1-208ENST00000573600 TMEM71Q6P5X7 295 aa27.26■■□□□ 1.95
CTDNEP1-208ENST00000573600 ZCCHC12Q6PEW1 402 aa27.26■■□□□ 1.95
CTDNEP1-208ENST00000573600 APOBEC4Q8WW27 367 aaKnown RBP27.26■■□□□ 1.95
CTDNEP1-208ENST00000573600 MVB12AQ96EY5 273 aa27.26■■□□□ 1.95
CTDNEP1-208ENST00000573600 CUTCQ9NTM9 273 aa27.26■■□□□ 1.95
CTDNEP1-208ENST00000573600 MAT2BQ9NZL9 334 aa27.26■■□□□ 1.95
CTDNEP1-208ENST00000573600 PDP1Q9P0J1 537 aaPredicted RBP27.26■■□□□ 1.95
CTDNEP1-208ENST00000573600 PCDHGB5Q9Y5G0 923 aa27.26■■□□□ 1.95
CTDNEP1-208ENST00000573600 CABIN1Q9Y6J0 2220 aa27.26■■□□□ 1.95
CTDNEP1-208ENST00000573600 COL6A3P12111 3177 aa27.25■■□□□ 1.95
CTDNEP1-208ENST00000573600 SIGLEC6O43699 453 aa27.25■■□□□ 1.95
CTDNEP1-208ENST00000573600 PCDHGA12O60330 932 aa27.25■■□□□ 1.95
CTDNEP1-208ENST00000573600 RHCEP18577 417 aa27.25■■□□□ 1.95
CTDNEP1-208ENST00000573600 NELFEP18615 380 aaKnown RBP27.25■■□□□ 1.95
CTDNEP1-208ENST00000573600 SOX18P35713 384 aa27.25■■□□□ 1.95
CTDNEP1-208ENST00000573600 XCR1P46094 333 aa27.25■■□□□ 1.95
CTDNEP1-208ENST00000573600 MYBPC1Q00872 1141 aa27.25■■□□□ 1.95
CTDNEP1-208ENST00000573600 SLC13A2Q13183 592 aa27.25■■□□□ 1.95
CTDNEP1-208ENST00000573600 ZNF528Q3MIS6 628 aa27.25■■□□□ 1.95
CTDNEP1-208ENST00000573600 TTC23Q5W5X9 447 aa27.25■■□□□ 1.95
CTDNEP1-208ENST00000573600 C16orf62Q7Z3J2 963 aa27.25■■□□□ 1.95
CTDNEP1-208ENST00000573600 ST13P4Q8IZP2 240 aaPredicted RBP27.25■■□□□ 1.95
CTDNEP1-208ENST00000573600 GPR32P1Q8NGA4 272 aa27.25■■□□□ 1.95
CTDNEP1-208ENST00000573600 ZNF696Q9H7X3 374 aa27.25■■□□□ 1.95
CTDNEP1-208ENST00000573600 PRTFDC1Q9NRG1 225 aa27.25■■□□□ 1.95
CTDNEP1-208ENST00000573600 SLC6A14Q9UN76 642 aa27.25■■□□□ 1.95
CTDNEP1-208ENST00000573600 KCNE3Q9Y6H6 103 aa27.25■■□□□ 1.95
CTDNEP1-208ENST00000573600 CER1O95813 267 aa27.24■■□□□ 1.95
CTDNEP1-208ENST00000573600 ZIK1Q3SY52 487 aaPredicted RBP27.24■■□□□ 1.95
CTDNEP1-208ENST00000573600 CYP27C1Q4G0S4 372 aa27.24■■□□□ 1.95
CTDNEP1-208ENST00000573600 HEPHL1Q6MZM0 1159 aa27.24■■□□□ 1.95
CTDNEP1-208ENST00000573600 USP51Q70EK9 711 aa27.24■■□□□ 1.95
CTDNEP1-208ENST00000573600 ZNF555Q8NEP9 628 aa27.24■■□□□ 1.95
CTDNEP1-208ENST00000573600 CTHRC1Q96CG8 243 aa27.24■■□□□ 1.95
CTDNEP1-208ENST00000573600 SLC35A4Q96G79 324 aa27.24■■□□□ 1.95
CTDNEP1-208ENST00000573600 PIP5K1AQ99755 562 aa27.24■■□□□ 1.95
CTDNEP1-208ENST00000573600 TOR3AQ9H497 397 aa27.24■■□□□ 1.95
CTDNEP1-208ENST00000573600 ZNF768Q9H5H4 540 aaKnown RBP27.24■■□□□ 1.95
CTDNEP1-208ENST00000573600 LYVE1Q9Y5Y7 322 aa27.24■■□□□ 1.95
CTDNEP1-208ENST00000573600 CCDC88CQ9P219 2028 aa27.24■■□□□ 1.95
CTDNEP1-208ENST00000573600 LY6G6EA0A0G2JKS1 128 aa27.24■■□□□ 1.95
CTDNEP1-208ENST00000573600 TNFRSF11BO00300 401 aa27.24■■□□□ 1.95
CTDNEP1-208ENST00000573600 OR10H2O60403 315 aa27.24■■□□□ 1.95
CTDNEP1-208ENST00000573600 H6PDO95479 791 aa27.24■■□□□ 1.95
CTDNEP1-208ENST00000573600 IGLV3-21P80748 117 aaPredicted RBP27.24■■□□□ 1.95
CTDNEP1-208ENST00000573600 MAT1AQ00266 395 aaKnown RBP27.24■■□□□ 1.95
CTDNEP1-208ENST00000573600 MGAT2Q10469 447 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms