RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 WFDC8Q8IUA0 241 aa9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 SRFBP1Q8NEF9 429 aaKnown RBP9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 FIG4Q92562 907 aa9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 TANKQ92844 425 aa9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 PDLIM5Q96HC4 596 aaKnown RBP9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 TNFRSF13CQ96RJ3 184 aa9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 NODALQ96S42 347 aa9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 FAM167BQ9BTA0 163 aa9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 SORBS1Q9BX66 1292 aaKnown RBP9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 MS4A8Q9BY19 250 aa9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 ACTR8Q9H981 624 aa9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 TAS2R10Q9NYW0 307 aa9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 PTBP2Q9UKA9 531 aaKnown RBP9.4□□□□□ -0.9
CTDNEP1-202ENST00000570380 OR10H2O60403 315 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 SH3BGRLO75368 114 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 CCDC175P0C221 793 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 RHOXF2BP0C7M4 288 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 MLNP12872 115 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 PPP3CBP16298 524 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 SRD5A1P18405 259 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 CD22P20273 847 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 CFPP27918 469 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 VPS41P49754 854 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 HNMTP50135 292 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 CASP9P55211 416 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 CLDN15P56746 228 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 NRG3P56975 720 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 VLDLRP98155 873 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 CDKL1Q00532 357 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 TNFRSF17Q02223 184 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 SLAMF1Q13291 335 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 TRIP13Q15645 432 aaPredicted RBP9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 EXOC3L2Q2M3D2 409 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 AP5B1Q2VPB7 878 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 HLA-DQA1Q5Y7H0 255 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 AAGABQ6PD74 315 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 ZNF615Q8N8J6 731 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 SMAP2Q8WU79 429 aaPredicted RBP9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 NEUROG1Q92886 237 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 HGDQ93099 445 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 FBXW5Q969U6 566 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 VPS39Q96JC1 886 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 SFXN2Q96NB2 322 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 EGFL8Q99944 293 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 PELOQ9BRX2 385 aaKnown RBP9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 RHNO1Q9BSD3 238 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 OSBPL11Q9BXB4 747 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 EHD1Q9H4M9 534 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 ESRP2Q9H6T0 727 aaKnown RBP9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 PROCRQ9UNN8 238 aa9.39□□□□□ -0.91
CTDNEP1-202ENST00000570380 MGAM2Q2M2H8 2515 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 FAM234BA2RU67 622 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 NPEPPSL1A6NEC2 478 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 GOLGA8MH3BSY2 632 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 SAP18O00422 153 aaKnown RBP9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 SSX4O60224 188 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 PPM1BO75688 479 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 GPR75O95800 540 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 AIFM1O95831 613 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 PGRP06401 933 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 CT62P0C5K7 136 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 TCEA1P23193 301 aaKnown RBP9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 SRD5A2P31213 254 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 GALNSP34059 522 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 SSR2P43308 183 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 HNRNPH2P55795 449 aaKnown RBP9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 FAPQ12884 760 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 SNTA1Q13424 505 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 DOC2AQ14183 400 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 GUSBP1Q15486 140 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 BCL2A1Q16548 175 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 CYP1B1Q16678 543 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 BHLHB9Q6PI77 547 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 RAD9BQ6WBX8 426 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 STAC2Q6ZMT1 411 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 IL17RELQ6ZVW7 336 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 CHMP1BQ7LBR1 199 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 NUP54Q7Z3B4 507 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 GPR180Q86V85 440 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 OR10H5Q8NGA6 315 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 ZNF473Q8WTR7 871 aaKnown RBP9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 ANKRD7Q92527 254 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 RHBDF1Q96CC6 855 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 WDR34Q96EX3 536 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 SIGLEC10Q96LC7 697 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 HS6ST2Q96MM7 605 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 CAPS2Q9BXY5 557 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 NXF5Q9H1B4 397 aaKnown RBP9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 RNF122Q9H9V4 155 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 CXorf21Q9HAI6 301 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 MS4A12Q9NXJ0 267 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 GPRC5BQ9NZH0 403 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 KLRF1Q9NZS2 232 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 FBXL2Q9UKC9 423 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 VWA7Q9Y334 891 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 OARD1Q9Y530 152 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 CAPN6Q9Y6Q1 641 aa9.38□□□□□ -0.91
CTDNEP1-202ENST00000570380 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 A0A1W2PS29 197 aa9.37□□□□□ -0.91
CTDNEP1-202ENST00000570380 GLOD5A6NK44 160 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms