RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 UBE2J2Q8N2K1 259 aa10.01□□□□□ -0.81
UBFD1-205ENST00000566136 OR10S1Q8NGN2 331 aa10.01□□□□□ -0.81
UBFD1-205ENST00000566136 SHKBP1Q8TBC3 707 aa10.01□□□□□ -0.81
UBFD1-205ENST00000566136 DTX3LQ8TDB6 740 aa10.01□□□□□ -0.81
UBFD1-205ENST00000566136 MEAF6Q9HAF1 191 aa10.01□□□□□ -0.81
UBFD1-205ENST00000566136 SEMA5BQ9P283 1151 aa10.01□□□□□ -0.81
UBFD1-205ENST00000566136 SLC2A6Q9UGQ3 507 aa10.01□□□□□ -0.81
UBFD1-205ENST00000566136 BDP1A6H8Y1 2624 aa10.01□□□□□ -0.81
UBFD1-205ENST00000566136 NYNRINQ9P2P1 1898 aaKnown RBP10.01□□□□□ -0.81
UBFD1-205ENST00000566136 A0A087WV48 116 aa10.01□□□□□ -0.81
UBFD1-205ENST00000566136 HLA-DQB2P05538 268 aa10.01□□□□□ -0.81
UBFD1-205ENST00000566136 SERPINA6P08185 405 aa10.01□□□□□ -0.81
UBFD1-205ENST00000566136 HLA-FP30511 346 aa10.01□□□□□ -0.81
UBFD1-205ENST00000566136 PRDX2P32119 198 aa10.01□□□□□ -0.81
UBFD1-205ENST00000566136 POLR2GP62487 172 aaKnown RBP eCLIP10.01□□□□□ -0.81
UBFD1-205ENST00000566136 EIF4EBP2Q13542 120 aaPredicted RBP10.01□□□□□ -0.81
UBFD1-205ENST00000566136 RTP5Q14D33 572 aa10.01□□□□□ -0.81
UBFD1-205ENST00000566136 EXT1Q16394 746 aa10.01□□□□□ -0.81
UBFD1-205ENST00000566136 ARL13AQ5H913 290 aaPredicted RBP10.01□□□□□ -0.81
UBFD1-205ENST00000566136 ZDHHC20Q5W0Z9 365 aa10.01□□□□□ -0.81
UBFD1-205ENST00000566136 DLEU7Q6UYE1 221 aa10.01□□□□□ -0.81
UBFD1-205ENST00000566136 GHDCQ8N2G8 530 aa10.01□□□□□ -0.81
UBFD1-205ENST00000566136 ZNF781Q8N8C0 355 aa10.01□□□□□ -0.81
UBFD1-205ENST00000566136 LINGO1Q96FE5 620 aa10.01□□□□□ -0.81
UBFD1-205ENST00000566136 BBS4Q96RK4 519 aa10.01□□□□□ -0.81
UBFD1-205ENST00000566136 ATP13A3Q9H7F0 1226 aa10.01□□□□□ -0.81
UBFD1-205ENST00000566136 MRPL40Q9NQ50 206 aaKnown RBP10.01□□□□□ -0.81
UBFD1-205ENST00000566136 ABCC13Q9NSE7 274 aa10.01□□□□□ -0.81
UBFD1-205ENST00000566136 FKBP14Q9NWM8 211 aa10.01□□□□□ -0.81
UBFD1-205ENST00000566136 BRWD1Q9NSI6 2320 aa10.01□□□□□ -0.81
UBFD1-205ENST00000566136 TCF20Q9UGU0 1960 aaKnown RBP10.01□□□□□ -0.81
UBFD1-205ENST00000566136 TMEM89A2RUT3 159 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 E9PAM4 449 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 G3V2L1 256 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 CSO75390 466 aaKnown RBP10□□□□□ -0.81
UBFD1-205ENST00000566136 VAPBO95292 243 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 ADRA1AP35348 466 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 MTAPQ13126 283 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 KRT33BQ14525 404 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 FAM83EQ2M2I3 478 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 CCDC153Q494R4 210 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 ARTNQ5T4W7 220 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 PRAMEF5Q5TYX0 476 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 PRAMEF6Q5VXH4 476 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 RGS7BPQ6MZT1 257 aaPredicted RBP10□□□□□ -0.81
UBFD1-205ENST00000566136 TFAP2DQ7Z6R9 452 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 CLEC14AQ86T13 490 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 ZNF598Q86UK7 904 aaKnown RBP10□□□□□ -0.81
UBFD1-205ENST00000566136 SPATA6LQ8N4H0 392 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 TTC9BQ8N6N2 239 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 PSD4Q8NDX1 1056 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 THTPAQ9BU02 230 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 FTHL17Q9BXU8 183 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 C1GALT1Q9NS00 363 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 RBM22Q9NW64 420 aaKnown RBP eCLIP10□□□□□ -0.81
UBFD1-205ENST00000566136 TBC1D24Q9ULP9 559 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 RBMX2Q9Y388 322 aaKnown RBP10□□□□□ -0.81
UBFD1-205ENST00000566136 INSL6Q9Y581 213 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 COL4A4P53420 1690 aaPredicted RBP10□□□□□ -0.81
UBFD1-205ENST00000566136 PATJQ8NI35 1801 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 SULT1B1O43704 296 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 ATG13O75143 517 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 OPN1LWP04000 364 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 KCNQ1P51787 676 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 HSF2Q03933 536 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 CCDC6Q16204 474 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 CLLU1OSQ5K130 101 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 BRMS1LQ5PSV4 323 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 ZC3HC1Q86WB0 502 aaKnown RBP10□□□□□ -0.81
UBFD1-205ENST00000566136 BCORP1Q8N888 145 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 PNPLA1Q8N8W4 532 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 OR4K14Q8NGD5 310 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 TOP1MTQ969P6 601 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 B3GALT6Q96L58 329 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 C9orf16Q9BUW7 83 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 KIFC1Q9BW19 673 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 CATSPERBQ9H7T0 1116 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 DCLRE1BQ9H816 532 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 NMRAL1Q9HBL8 299 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 DNAJB4Q9UDY4 337 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 DUSP13Q9UII6 198 aa10□□□□□ -0.81
UBFD1-205ENST00000566136 GXYLT2A0PJZ3 443 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 ZNF195O14628 629 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 MATN3O15232 486 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 GRID2O43424 1007 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 SLC25A12O75746 678 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 SERPINI2O75830 405 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 NEBLO76041 1014 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 RETP07949 1114 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 MAXP61244 160 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 VBP1P61758 197 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 PPIAP62937 165 aaKnown RBP9.99□□□□□ -0.81
UBFD1-205ENST00000566136 SLC25A3Q00325 362 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 MC2RQ01718 297 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 MEF2AQ02078 507 aaPredicted RBP9.99□□□□□ -0.81
UBFD1-205ENST00000566136 ACOX1Q15067 660 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 TBRG1Q3YBR2 411 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 NKAIN1Q4KMZ8 207 aa9.99□□□□□ -0.81
UBFD1-205ENST00000566136 AASDHQ4L235 1098 aaPredicted RBP9.99□□□□□ -0.81
UBFD1-205ENST00000566136 FAM98BQ52LJ0 330 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms