RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 ETHE1O95571 254 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 IGHV4-39P01824 125 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 CNTFP26441 200 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 GP5P40197 560 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 SERPINB9P50453 376 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 HNRNPFP52597 415 aaKnown RBP8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 POU4F1Q01851 419 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 PCDH1Q08174 1060 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 BIKQ13323 160 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 FGFBP1Q14512 234 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 FAM174BQ3ZCQ3 159 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 KBTBD12Q3ZCT8 623 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 FAM120AOSQ5T036 256 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 TIGD3Q6B0B8 471 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 C22orf34Q6ZV56 151 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 YRDCQ86U90 279 aaKnown RBP8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 TAGAPQ8N103 731 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 TMEM52Q8NDY8 209 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 FAM83FQ8NEG4 500 aaPredicted RBP8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 OR1J4Q8NGS1 313 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 ATL1Q8WXF7 558 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 ANKRD7Q92527 254 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 FBXW5Q969U6 566 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 RBM18Q96H35 190 aaKnown RBP8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 RILPQ96NA2 401 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 AIF1LQ9BQI0 150 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 PARD6BQ9BYG5 372 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 OPN3Q9H1Y3 402 aaPredicted RBP8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 POPDC3Q9HBV1 291 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 FBXO6Q9NRD1 293 aaPredicted RBP8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 WWOXQ9NZC7 414 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 CLCF1Q9UBD9 225 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 KCNS2Q9ULS6 477 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 DLGAP4Q9Y2H0 992 aa8.19□□□□□ -1.1
VPS9D1-205ENST00000565452 IGHV4-30-2A0A087WSY4 118 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 IQANK1A0A1B0GTG1 560 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 PABPN1LA6NDY0 278 aaKnown RBP8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 RIPK2O43353 540 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 OR10H2O60403 315 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 ABCB7O75027 752 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 H2AFYO75367 372 aaKnown RBP8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 ERLIN1O75477 346 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 THBDP07204 575 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 C8GP07360 202 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 THBS1P07996 1170 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 SOD3P08294 240 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 FAM153BP0C7A2 387 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 DANCRP0C864 163 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 CD8BP10966 210 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 GABRB3P28472 473 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 HPDP32754 393 aaPredicted RBP8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 RGS4P49798 205 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 SLC12A2P55011 1212 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 VSNL1P62760 191 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 DEFA6Q01524 100 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 FUT7Q11130 342 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 FAM153CQ494X1 144 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 VWA1Q6PCB0 445 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 AAGABQ6PD74 315 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 CLEC2AQ6UVW9 174 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 SLC29A4Q7RTT9 530 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 ZC3HC1Q86WB0 502 aaKnown RBP8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 TRIM42Q8IWZ5 723 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 CTAGE3PQ8IX95 158 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 DEPDC4Q8N2C3 294 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 ZNF610Q8N9Z0 462 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 OR10H5Q8NGA6 315 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 SLC5A11Q8WWX8 675 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 GAL3ST3Q96A11 431 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 TSPAN17Q96FV3 270 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 PDLIM5Q96HC4 596 aaKnown RBP8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 ZNF845Q96IR2 970 aaPredicted RBP8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 PKNOX2Q96KN3 472 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 RBBP8Q99708 897 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 MCMBPQ9BTE3 642 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 ALG2Q9H553 416 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 FANCFQ9NPI8 374 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 DNAJC11Q9NVH1 559 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 ZNF180Q9UJW8 692 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 RNF112Q9ULX5 631 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 PDE10AQ9Y233 779 aa8.18□□□□□ -1.1
VPS9D1-205ENST00000565452 A0A1W2PP18 115 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 CCDC189A1A4V9 331 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 ELOA3DA6NLF2 546 aaPredicted RBP8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 CXorf49A8MYA2 514 aaPredicted RBP8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 PLOD2O00469 737 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 EMC8O43402 210 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 ERI3O43414 337 aaKnown RBP8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 TGM6O95932 706 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 INHBAP08476 426 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 CREB1P16220 341 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 SLC25A16P16260 332 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 CCKARP32238 428 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 KIR2DL2P43627 348 aaPredicted RBP8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 GZMKP49863 264 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 LIM2P55344 173 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 IL2P60568 153 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 FAPQ12884 760 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 SLC29A2Q14542 456 aa8.17□□□□□ -1.1
VPS9D1-205ENST00000565452 SETDB1Q15047 1291 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms