RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 OR10A5Q9H207 317 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 EXO5Q9H790 373 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 VIPAS39Q9H9C1 493 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 KCNK9Q9NPC2 374 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 TNFRSF10DQ9UBN6 386 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 MEMO1Q9Y316 297 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 FIS1Q9Y3D6 152 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 LIPGQ9Y5X9 500 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 EXPH5Q8NEV8 1989 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 CELSR2Q9HCU4 2923 aa12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 NCOA6Q14686 2063 aaPredicted RBP12.57□□□□□ -0.4
VPS9D1-204ENST00000565023 OR6C76A6NM76 312 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 NPIPA2E9PIF3 369 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 NPIPA3F8WFD2 350 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 CHRNGP07510 517 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 FGF4P08620 206 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 IL3P08700 152 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 UROSP10746 265 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 ARRB2P32121 409 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 KCNJ2P63252 427 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 ACSM2AQ08AH3 577 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 IMPG1Q17R60 797 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 ZNF791Q3KP31 576 aaPredicted RBP12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 ARL13AQ5H913 290 aaPredicted RBP12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 ACSM2BQ68CK6 577 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 TRIM46Q7Z4K8 759 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 SLC22A16Q86VW1 577 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 TAGAPQ8N103 731 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 ZNF808Q8N4W9 903 aaPredicted RBP12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 TMEM251Q8N6I4 163 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 FAM57AQ8TBR7 257 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 CHTF18Q8WVB6 975 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 EXOSC8Q96B26 276 aaKnown RBP12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 ARL8AQ96BM9 186 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 PKNOX2Q96KN3 472 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 SGCZQ96LD1 299 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 LDAHQ9H6V9 325 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 HEY2Q9UBP5 337 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 MCM8Q9UJA3 840 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 UTS2RQ9UKP6 389 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 CES1P1Q9UKY3 287 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 DLGAP4Q9Y2H0 992 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 ZNF780BQ9Y6R6 833 aa12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.56□□□□□ -0.4
VPS9D1-204ENST00000565023 TMEM120BA0PK00 339 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 ENO4A6NNW6 628 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 AZIN1O14977 448 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 CELA3AP09093 270 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 CSNK2A2P19784 350 aaPredicted RBP12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 GALNSP34059 522 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 SMSP52788 366 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 FBXW4P57775 412 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 RAE1P78406 368 aaKnown RBP12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 MRPS35P82673 323 aaKnown RBP12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 KANK2Q63ZY3 851 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 CLEC6AQ6EIG7 209 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 PAOXQ6QHF9 649 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 RPTNQ6XPR3 784 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 RNF165Q6ZSG1 346 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 HOMEZQ8IX15 550 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 VWA5B2Q8N398 1253 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 SLC15A4Q8N697 577 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 SIMC1Q8NDZ2 872 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 OR5M9Q8NGP3 310 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 C16orf78Q8WTQ4 265 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 DIO2Q92813 273 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 C11orf24Q96F05 449 aaPredicted RBP12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 SH3GL2Q99962 352 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 ANKRA2Q9H9E1 313 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 IL1RL2Q9HB29 575 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 EML4Q9HC35 981 aaKnown RBP12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 MAT2BQ9NZL9 334 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 PSME2Q9UL46 239 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 DTX4Q9Y2E6 619 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 CACNA1CQ13936 2221 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 POLQO75417 2590 aa12.55□□□□□ -0.4
VPS9D1-204ENST00000565023 WDR91A4D1P6 747 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 NME6O75414 186 aaPredicted RBP12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 SERPINE1P05121 402 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 FBXO45P0C2W1 286 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 PCSK2P16519 638 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 HTR1EP28566 365 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 TIA1P31483 386 aaKnown RBP eCLIP12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 WDR4P57081 412 aaKnown RBP12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 TRA2BP62995 288 aaKnown RBP12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 FUT7Q11130 342 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 CDSNQ15517 529 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 PRICKLE4Q2TBC4 344 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 UGT3A2Q3SY77 523 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 TRMT12Q53H54 448 aaKnown RBP12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 SPIN4Q56A73 249 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 CES4AQ5XG92 561 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 BICRALQ6AI39 1079 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 ARHGAP11AQ6P4F7 1023 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 BNC2Q6ZN30 1099 aaPredicted RBP12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 CCDC116Q8IYX3 515 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 CLYBLQ8N0X4 340 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 LRRC25Q8N386 305 aaPredicted RBP12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 FAM109AQ8N4B1 249 aa12.54□□□□□ -0.4
VPS9D1-204ENST00000565023 RPRMLQ8N4K4 120 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms