RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 PDYNP01213 254 aa15.31■□□□□ 0.04
CCNF-203ENST00000564236 ABCB1P08183 1280 aaPredicted RBP15.31■□□□□ 0.04
CCNF-203ENST00000564236 ABHD2P08910 425 aa15.31■□□□□ 0.04
CCNF-203ENST00000564236 SNRPAP09012 282 aaKnown RBP15.31■□□□□ 0.04
CCNF-203ENST00000564236 HSD3B1P14060 373 aa15.31■□□□□ 0.04
CCNF-203ENST00000564236 HSD3B2P26439 372 aa15.31■□□□□ 0.04
CCNF-203ENST00000564236 GDF1P27539 372 aa15.31■□□□□ 0.04
CCNF-203ENST00000564236 ARL1P40616 181 aaPredicted RBP15.31■□□□□ 0.04
CCNF-203ENST00000564236 SNTA1Q13424 505 aa15.31■□□□□ 0.04
CCNF-203ENST00000564236 C6orf163Q5TEZ5 329 aa15.31■□□□□ 0.04
CCNF-203ENST00000564236 VASNQ6EMK4 673 aa15.31■□□□□ 0.04
CCNF-203ENST00000564236 POMZP3Q6PJE2 187 aa15.31■□□□□ 0.04
CCNF-203ENST00000564236 TMEM64Q6YI46 380 aa15.31■□□□□ 0.04
CCNF-203ENST00000564236 PACS2Q86VP3 889 aa15.31■□□□□ 0.04
CCNF-203ENST00000564236 LACC1Q8IV20 430 aa15.31■□□□□ 0.04
CCNF-203ENST00000564236 LIX1Q8N485 282 aa15.31■□□□□ 0.04
CCNF-203ENST00000564236 HSPBAP1Q96EW2 488 aa15.31■□□□□ 0.04
CCNF-203ENST00000564236 ZNF681Q96N22 645 aa15.31■□□□□ 0.04
CCNF-203ENST00000564236 NXF5Q9H1B4 397 aaKnown RBP15.31■□□□□ 0.04
CCNF-203ENST00000564236 FARSBQ9NSD9 589 aaKnown RBP15.31■□□□□ 0.04
CCNF-203ENST00000564236 NMRK1Q9NWW6 199 aa15.31■□□□□ 0.04
CCNF-203ENST00000564236 ZNF629Q9UEG4 869 aaPredicted RBP15.31■□□□□ 0.04
CCNF-203ENST00000564236 SLC12A4Q9UP95 1085 aa15.31■□□□□ 0.04
CCNF-203ENST00000564236 DTX4Q9Y2E6 619 aa15.31■□□□□ 0.04
CCNF-203ENST00000564236 A0A087WUV0 522 aaPredicted RBP15.3■□□□□ 0.04
CCNF-203ENST00000564236 TO15178 435 aa15.3■□□□□ 0.04
CCNF-203ENST00000564236 PPM1BO75688 479 aa15.3■□□□□ 0.04
CCNF-203ENST00000564236 LRATO95237 230 aa15.3■□□□□ 0.04
CCNF-203ENST00000564236 RHOXF2BP0C7M4 288 aa15.3■□□□□ 0.04
CCNF-203ENST00000564236 CSNK2A2P19784 350 aaPredicted RBP15.3■□□□□ 0.04
CCNF-203ENST00000564236 NT5EP21589 574 aa15.3■□□□□ 0.04
CCNF-203ENST00000564236 HSD17B3P37058 310 aa15.3■□□□□ 0.04
CCNF-203ENST00000564236 DCAF7P61962 342 aa15.3■□□□□ 0.04
CCNF-203ENST00000564236 SF3B4Q15427 424 aaKnown RBP eCLIP15.3■□□□□ 0.048e-10■■■■■ 45.5
CCNF-203ENST00000564236 BICRALQ6AI39 1079 aa15.3■□□□□ 0.04
CCNF-203ENST00000564236 TIGD3Q6B0B8 471 aa15.3■□□□□ 0.04
CCNF-203ENST00000564236 ARSKQ6UWY0 536 aa15.3■□□□□ 0.04
CCNF-203ENST00000564236 CNPY4Q8N129 248 aa15.3■□□□□ 0.04
CCNF-203ENST00000564236 RELL2Q8NC24 303 aaPredicted RBP15.3■□□□□ 0.04
CCNF-203ENST00000564236 NAXEQ8NCW5 288 aa15.3■□□□□ 0.04
CCNF-203ENST00000564236 ZNF675Q8TD23 568 aa15.3■□□□□ 0.04
CCNF-203ENST00000564236 SELENOMQ8WWX9 145 aa15.3■□□□□ 0.04
CCNF-203ENST00000564236 HGDQ93099 445 aa15.3■□□□□ 0.04
CCNF-203ENST00000564236 ERP27Q96DN0 273 aa15.3■□□□□ 0.04
CCNF-203ENST00000564236 MTBPQ96DY7 904 aa15.3■□□□□ 0.04
CCNF-203ENST00000564236 JSRP1Q96MG2 331 aaPredicted RBP15.3■□□□□ 0.04
CCNF-203ENST00000564236 SH3GL2Q99962 352 aa15.3■□□□□ 0.04
CCNF-203ENST00000564236 ITGB1BP2Q9UKP3 347 aa15.3■□□□□ 0.04
CCNF-203ENST00000564236 PSME2Q9UL46 239 aa15.3■□□□□ 0.04
CCNF-203ENST00000564236 EML6Q6ZMW3 1958 aa15.29■□□□□ 0.04
CCNF-203ENST00000564236 CD8B2A6NJW9 211 aa15.29■□□□□ 0.04
CCNF-203ENST00000564236 CTAG2O75638 210 aa15.29■□□□□ 0.04
CCNF-203ENST00000564236 CBX7O95931 251 aa15.29■□□□□ 0.04
CCNF-203ENST00000564236 GCAP28676 217 aa15.29■□□□□ 0.04
CCNF-203ENST00000564236 PTPN6P29350 595 aa15.29■□□□□ 0.04
CCNF-203ENST00000564236 TRPC1P48995 793 aa15.29■□□□□ 0.04
CCNF-203ENST00000564236 CDH13P55290 713 aa15.29■□□□□ 0.04
CCNF-203ENST00000564236 CLCQ05315 142 aa15.29■□□□□ 0.04
CCNF-203ENST00000564236 CSTF3Q12996 717 aaKnown RBP15.29■□□□□ 0.04
CCNF-203ENST00000564236 NSUN5P2Q63ZY6 315 aa15.29■□□□□ 0.04
CCNF-203ENST00000564236 SLC30A6Q6NXT4 461 aa15.29■□□□□ 0.04
CCNF-203ENST00000564236 RPS27LQ71UM5 84 aaKnown RBP15.29■□□□□ 0.04
CCNF-203ENST00000564236 NUP54Q7Z3B4 507 aa15.29■□□□□ 0.04
CCNF-203ENST00000564236 MNS1Q8NEH6 495 aa15.29■□□□□ 0.04
CCNF-203ENST00000564236 NINJ1Q92982 152 aa15.29■□□□□ 0.04
CCNF-203ENST00000564236 C11orf24Q96F05 449 aaPredicted RBP15.29■□□□□ 0.04
CCNF-203ENST00000564236 CNRIP1Q96F85 164 aaPredicted RBP15.29■□□□□ 0.04
CCNF-203ENST00000564236 LCORQ96JN0 433 aaPredicted RBP15.29■□□□□ 0.04
CCNF-203ENST00000564236 C16orf45Q96MC5 204 aaPredicted RBP15.29■□□□□ 0.04
CCNF-203ENST00000564236 GNRHR2Q96P88 292 aa15.29■□□□□ 0.04
CCNF-203ENST00000564236 ZNF382Q96SR6 550 aa15.29■□□□□ 0.04
CCNF-203ENST00000564236 FAIM2Q9BWQ8 316 aa15.29■□□□□ 0.04
CCNF-203ENST00000564236 VPS29Q9UBQ0 182 aa15.29■□□□□ 0.04
CCNF-203ENST00000564236 FOXD3Q9UJU5 478 aaPredicted RBP15.29■□□□□ 0.04
CCNF-203ENST00000564236 C15orf38-AP3S2A0A0A6YYH1 394 aa15.28■□□□□ 0.04
CCNF-203ENST00000564236 MBD3L4A6NDZ8 208 aaPredicted RBP15.28■□□□□ 0.04
CCNF-203ENST00000564236 MBD3L3A6NE82 208 aaPredicted RBP15.28■□□□□ 0.04
CCNF-203ENST00000564236 MBD3L5A6NJ08 208 aaPredicted RBP15.28■□□□□ 0.04
CCNF-203ENST00000564236 POC1B-GALNT4F8VUJ3 575 aa15.28■□□□□ 0.04
CCNF-203ENST00000564236 DVL2O14641 736 aa15.28■□□□□ 0.04
CCNF-203ENST00000564236 SNPHO15079 494 aa15.28■□□□□ 0.04
CCNF-203ENST00000564236 CD1EP15812 388 aa15.28■□□□□ 0.04
CCNF-203ENST00000564236 DRD5P21918 477 aa15.28■□□□□ 0.04
CCNF-203ENST00000564236 PTGDSP41222 190 aa15.28■□□□□ 0.04
CCNF-203ENST00000564236 PPICP45877 212 aa15.28■□□□□ 0.04
CCNF-203ENST00000564236 EMDP50402 254 aa15.28■□□□□ 0.04
CCNF-203ENST00000564236 DUSP2Q05923 314 aa15.28■□□□□ 0.04
CCNF-203ENST00000564236 MYBPHQ13203 477 aa15.28■□□□□ 0.04
CCNF-203ENST00000564236 RASA2Q15283 850 aa15.28■□□□□ 0.04
CCNF-203ENST00000564236 CEBPEQ15744 281 aa15.28■□□□□ 0.04
CCNF-203ENST00000564236 ZNF678Q5SXM1 525 aa15.28■□□□□ 0.04
CCNF-203ENST00000564236 LGSNQ5TDP6 509 aa15.28■□□□□ 0.04
CCNF-203ENST00000564236 FAM111BQ6SJ93 734 aa15.28■□□□□ 0.04
CCNF-203ENST00000564236 WDR53Q7Z5U6 358 aaPredicted RBP15.28■□□□□ 0.04
CCNF-203ENST00000564236 MMP21Q8N119 569 aa15.28■□□□□ 0.04
CCNF-203ENST00000564236 C1orf52Q8N6N3 182 aaKnown RBP15.28■□□□□ 0.04
CCNF-203ENST00000564236 MBD3L2Q8NHZ7 208 aaPredicted RBP15.28■□□□□ 0.04
CCNF-203ENST00000564236 RNF138Q8WVD3 245 aa15.28■□□□□ 0.04
CCNF-203ENST00000564236 IFT81Q8WYA0 676 aa15.28■□□□□ 0.04
CCNF-203ENST00000564236 ITPAQ9BY32 194 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms