RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 C10orf90Q96M02 699 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 ZNF681Q96N22 645 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 MS4A4EQ96PG1 132 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 ZNF607Q96SK3 696 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 NDC1Q9BTX1 674 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 SPATA5L1Q9BVQ7 753 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 CHID1Q9BWS9 393 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 TGIF2Q9GZN2 237 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 DDX18Q9NVP1 670 aaKnown RBP9.11□□□□□ -0.95
UBFD1-202ENST00000563366 CALML5Q9NZT1 146 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 NTMQ9P121 344 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 KLHL3Q9UH77 587 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 GMEB2Q9UKD1 530 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 ACSL6Q9UKU0 697 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 SRPK3Q9UPE1 567 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 LIPT1Q9Y234 373 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 LRCH1Q9Y2L9 728 aa9.11□□□□□ -0.95
UBFD1-202ENST00000563366 A0A087WV62 115 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 CPED1A4D0V7 1026 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 ZNF860A6NHJ4 632 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 SGK494L7N484 410 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 GNGT2O14610 69 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 CLOCKO15516 846 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 TPST1O60507 370 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 RDH16O75452 317 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 PRKRAO75569 313 aaKnown RBP9.1□□□□□ -0.95
UBFD1-202ENST00000563366 PRKD3O94806 890 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 CELA3AP09093 270 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 ITGA2P17301 1181 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 CSF2RBP32927 897 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 FEN1P39748 380 aaKnown RBP9.1□□□□□ -0.95
UBFD1-202ENST00000563366 MAGEA2P43356 314 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 CLCN2P51788 898 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 CRISP3P54108 245 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 HSD17B7P56937 341 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 FOLH1Q04609 750 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 LRRC36Q1X8D7 754 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 CRB2Q5IJ48 1285 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 ATAD3BQ5T9A4 648 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 GUSBP11Q6P575 273 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 ZCCHC12Q6PEW1 402 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 MED25Q71SY5 747 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 KRT73Q86Y46 540 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 PDSS2Q86YH6 399 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 LGI4Q8N135 537 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 C10orf111Q8N326 155 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 SVOPLQ8N434 492 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 SVOPQ8N4V2 548 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 EID2Q8N6I1 236 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 OR9A4Q8NGU2 314 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 ZNF675Q8TD23 568 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 ELP4Q96EB1 424 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 NAF1Q96HR8 494 aaKnown RBP9.1□□□□□ -0.95
UBFD1-202ENST00000563366 ZNF578Q96N58 590 aaPredicted RBP9.1□□□□□ -0.95
UBFD1-202ENST00000563366 OR1F2PQ96R84 312 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 BTBD2Q9BX70 525 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 OSBPL10Q9BXB5 764 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 TRIM4Q9C037 500 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 TRIM45Q9H8W5 580 aaPredicted RBP9.1□□□□□ -0.95
UBFD1-202ENST00000563366 CUTCQ9NTM9 273 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 EXD2Q9NVH0 621 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 GPATCH2Q9NW75 528 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 PDP2Q9P2J9 529 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 DNAJB9Q9UBS3 223 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 MRPS2Q9Y399 296 aaKnown RBP9.1□□□□□ -0.95
UBFD1-202ENST00000563366 PCDHGB3Q9Y5G1 929 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 ZDBF2Q9HCK1 2354 aa9.1□□□□□ -0.95
UBFD1-202ENST00000563366 ARID1BQ8NFD5 2236 aaPredicted RBP9.09□□□□□ -0.95
UBFD1-202ENST00000563366 A0A0A6YYC8 382 aaPredicted RBP9.09□□□□□ -0.95
UBFD1-202ENST00000563366 TMEM150CB9EJG8 249 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 I3L1I5 382 aaPredicted RBP9.09□□□□□ -0.95
UBFD1-202ENST00000563366 DSCR3O14972 297 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 FLRT2O43155 660 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 ZNF749O43361 778 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 CHST10O43529 356 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 HCRTR1O43613 425 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 FOXS1O43638 330 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 COQ9O75208 318 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 SERPINB7O75635 380 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 PRSS23O95084 383 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 CST1P01037 141 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 HMGN2P05204 90 aaKnown RBP9.09□□□□□ -0.95
UBFD1-202ENST00000563366 RPLP0P05388 317 aaKnown RBP9.09□□□□□ -0.95
UBFD1-202ENST00000563366 FABP3P05413 133 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 GP1BAP07359 652 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 SLC35E2P0CK97 266 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 C8orf89P0DMQ9 161 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 MATN1P21941 496 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 MC3RP41968 323 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 SEPHS1P49903 392 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 ARHGDIAP52565 204 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 PCBP3P57721 371 aaKnown RBP9.09□□□□□ -0.95
UBFD1-202ENST00000563366 SELENOWP63302 87 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 OLR1P78380 273 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 SIM1P81133 766 aaPredicted RBP9.09□□□□□ -0.95
UBFD1-202ENST00000563366 STX4Q12846 297 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 TRA2AQ13595 282 aaKnown RBP eCLIP9.09□□□□□ -0.95
UBFD1-202ENST00000563366 SERTAD2Q14140 314 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 GK3PQ14409 553 aa9.09□□□□□ -0.95
UBFD1-202ENST00000563366 MYBPC3Q14896 1274 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms