RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 TRIP10Q15642 601 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 CYBRD1Q53TN4 286 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 PRAMEF17Q5VTA0 474 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 C1orf189Q5VU69 101 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 PWWP2BQ6NUJ5 590 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 FAM111BQ6SJ93 734 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 ENPP6Q6UWR7 440 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 RNF111Q6ZNA4 994 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 KRT73Q86Y46 540 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 BMPERQ8N8U9 685 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 BBS10Q8TAM1 723 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 SLC38A5Q8WUX1 472 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 LZICQ8WZA0 190 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 RIT1Q92963 219 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 CLIP3Q96DZ5 547 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 GIMAP5Q96F15 307 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 TMEM19Q96HH6 336 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 OR7D2Q96RA2 312 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 ZNF607Q96SK3 696 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 SEPHS2Q99611 448 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 PKP2Q99959 881 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 TGIF2Q9GZN2 237 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 EQTNQ9NQ60 294 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 AGPAT4Q9NRZ5 378 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 RXFP3Q9NSD7 469 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 EXD2Q9NVH0 621 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 OCIAD1Q9NX40 245 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 V9GYQ6 96 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 CACNA1AO00555 2505 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 IGLV3-12A0A075B6K2 115 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 IGKV3D-11A0A0A0MRZ8 115 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 TTC36A6NLP5 189 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 C4orf47A7E2U8 309 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 TGFBR3LH3BV60 316 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 POLR1CO15160 346 aaPredicted RBP13.35□□□□□ -0.27
COMMD4-205ENST00000562310 SUV39H1O43463 412 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 DYRK3O43781 588 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 HYAL3O43820 417 aaPredicted RBP13.35□□□□□ -0.27
COMMD4-205ENST00000562310 SLC28A2O43868 658 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 PEX1O43933 1283 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 DEAF1O75398 565 aaPredicted RBP13.35□□□□□ -0.27
COMMD4-205ENST00000562310 TIPRLO75663 272 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 CDC123O75794 336 aaPredicted RBP13.35□□□□□ -0.27
COMMD4-205ENST00000562310 AK1P00568 194 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 LDLRP01130 860 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 CYC1P08574 325 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 NR2F1P10589 423 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 MAOAP21397 527 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 RORAP35398 523 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 MAN2A2P49641 1150 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 DCDP81605 110 aaKnown RBP13.35□□□□□ -0.27
COMMD4-205ENST00000562310 ATP6AP1Q15904 470 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 NKAIN1Q4KMZ8 207 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 OGFRL1Q5TC84 451 aaPredicted RBP13.35□□□□□ -0.27
COMMD4-205ENST00000562310 LILRA2Q8N149 483 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 TMEM102Q8N9M5 508 aaPredicted RBP13.35□□□□□ -0.27
COMMD4-205ENST00000562310 CDRT4Q8N9R6 151 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 ADAMTS15Q8TE58 950 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.35□□□□□ -0.27
COMMD4-205ENST00000562310 XAGE5Q8WWM1 108 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 RASSF5Q8WWW0 418 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 RAB8BQ92930 207 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 FKBP10Q96AY3 582 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 PTCHD1Q96NR3 888 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 STACQ99469 402 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 CMKLR1Q99788 373 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 SPATA5L1Q9BVQ7 753 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 CHID1Q9BWS9 393 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 BTBD2Q9BX70 525 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 VCXQ9H320 206 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 BCL2L10Q9HD36 194 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 PARD6AQ9NPB6 346 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 GIN1Q9NXP7 522 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 ZNF639Q9UID6 485 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 PCDHGB3Q9Y5G1 929 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 CLDN16Q9Y5I7 305 aa13.35□□□□□ -0.27
COMMD4-205ENST00000562310 PRAMEF2O60811 474 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 IFNA16P05015 189 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 ALOX5P09917 674 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 AQP1P29972 269 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 MAGEA2P43356 314 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 RAB15P59190 212 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 BTG2P78543 158 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 HPCAP84074 193 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 RHAGQ02094 409 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 OCA2Q04671 838 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 COL9A2Q14055 689 aaPredicted RBP13.34□□□□□ -0.27
COMMD4-205ENST00000562310 ERV3-1Q14264 604 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 MINDY4Q4G0A6 757 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 TRMT12Q53H54 448 aaKnown RBP13.34□□□□□ -0.27
COMMD4-205ENST00000562310 EXOSC6Q5RKV6 272 aaKnown RBP13.34□□□□□ -0.27
COMMD4-205ENST00000562310 MFSD4BQ5TF39 518 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 COX15Q7KZN9 410 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 C16orf62Q7Z3J2 963 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 GLRX5Q86SX6 157 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 SHISA5Q8N114 240 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 FAM86B1Q8N7N1 296 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 ANKFN1Q8N957 763 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 OR7G1Q8NGA0 311 aa13.34□□□□□ -0.27
COMMD4-205ENST00000562310 OR5D16Q8NGK9 328 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms