RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 ABCG2Q9UNQ0 655 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 PCDHGB2Q9Y5G2 931 aa16.04■□□□□ 0.16
HDDC3-206ENST00000561036 GPC6Q9Y625 555 aaPredicted RBP16.04■□□□□ 0.16
HDDC3-206ENST00000561036 ARID1BQ8NFD5 2236 aaPredicted RBP16.03■□□□□ 0.16
HDDC3-206ENST00000561036 PRAMEF27A3QJZ7 478 aa16.03■□□□□ 0.16
HDDC3-206ENST00000561036 hCG_2039718K7EN88 272 aa16.03■□□□□ 0.16
HDDC3-206ENST00000561036 DSCR3O14972 297 aa16.03■□□□□ 0.16
HDDC3-206ENST00000561036 ZNF749O43361 778 aa16.03■□□□□ 0.16
HDDC3-206ENST00000561036 OR10H2O60403 315 aa16.03■□□□□ 0.16
HDDC3-206ENST00000561036 OPN1SWP03999 348 aa16.03■□□□□ 0.16
HDDC3-206ENST00000561036 RPLP0P05388 317 aaKnown RBP16.03■□□□□ 0.16
HDDC3-206ENST00000561036 FOLR1P15328 257 aa16.03■□□□□ 0.16
HDDC3-206ENST00000561036 CD247P20963 164 aa16.03■□□□□ 0.16
HDDC3-206ENST00000561036 DNAJA1P31689 397 aaKnown RBP16.03■□□□□ 0.16
HDDC3-206ENST00000561036 GALNSP34059 522 aa16.03■□□□□ 0.16
HDDC3-206ENST00000561036 PTGER1P34995 402 aa16.03■□□□□ 0.16
HDDC3-206ENST00000561036 ID2Q02363 134 aa16.03■□□□□ 0.16
HDDC3-206ENST00000561036 ACY1Q03154 408 aa16.03■□□□□ 0.16
HDDC3-206ENST00000561036 SYPL1Q16563 259 aa16.03■□□□□ 0.16
HDDC3-206ENST00000561036 HEPHL1Q6MZM0 1159 aa16.03■□□□□ 0.16
HDDC3-206ENST00000561036 FAM111BQ6SJ93 734 aa16.03■□□□□ 0.16
HDDC3-206ENST00000561036 ARHGAP22Q7Z5H3 698 aa16.03■□□□□ 0.16
HDDC3-206ENST00000561036 SLC44A2Q8IWA5 706 aaPredicted RBP16.03■□□□□ 0.16
HDDC3-206ENST00000561036 ST13P4Q8IZP2 240 aaPredicted RBP16.03■□□□□ 0.16
HDDC3-206ENST00000561036 SPPL2AQ8TCT8 520 aa16.03■□□□□ 0.16
HDDC3-206ENST00000561036 ADAMTS15Q8TE58 950 aa16.03■□□□□ 0.16
HDDC3-206ENST00000561036 ZNF501Q96CX3 271 aaPredicted RBP16.03■□□□□ 0.16
HDDC3-206ENST00000561036 ZNF578Q96N58 590 aaPredicted RBP16.03■□□□□ 0.16
HDDC3-206ENST00000561036 OR1F2PQ96R84 312 aa16.03■□□□□ 0.16
HDDC3-206ENST00000561036 RBM4BQ9BQ04 359 aaKnown RBP16.03■□□□□ 0.16
HDDC3-206ENST00000561036 RBM4Q9BWF3 364 aaKnown RBP16.03■□□□□ 0.16
HDDC3-206ENST00000561036 GABARAPL1Q9H0R8 117 aa16.03■□□□□ 0.16
HDDC3-206ENST00000561036 REEP1Q9H902 201 aa16.03■□□□□ 0.16
HDDC3-206ENST00000561036 NDUFAF4Q9P032 175 aa16.03■□□□□ 0.16
HDDC3-206ENST00000561036 GMEB2Q9UKD1 530 aa16.03■□□□□ 0.16
HDDC3-206ENST00000561036 PCDHGB3Q9Y5G1 929 aa16.03■□□□□ 0.16
HDDC3-206ENST00000561036 A0A1W2PQM1 296 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 A8MU76 341 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 DLGAP1O14490 977 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 COQ9O75208 318 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 ALPLP05186 524 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 FPR1P21462 350 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 SOX18P35713 384 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 MPLP40238 635 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 KCNJ5P48544 419 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 MRPS35P82673 323 aaKnown RBP16.02■□□□□ 0.16
HDDC3-206ENST00000561036 STX4Q12846 297 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 EPS8Q12929 822 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 SLC13A2Q13183 592 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 DSG2Q14126 1118 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 SERTAD2Q14140 314 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 PDK3Q15120 406 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 RPS26P11Q5JNZ5 115 aaPredicted RBP16.02■□□□□ 0.16
HDDC3-206ENST00000561036 C6orf52Q5T4I8 152 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 TBPL2Q6SJ96 375 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 ZNF574Q6ZN55 896 aaPredicted RBP16.02■□□□□ 0.16
HDDC3-206ENST00000561036 TFAP2CQ92754 450 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 PROX1Q92786 737 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 GATA6Q92908 595 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 ZNF300Q96RE9 604 aaPredicted RBP16.02■□□□□ 0.16
HDDC3-206ENST00000561036 STACQ99469 402 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 EPYCQ99645 322 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 YIPF4Q9BSR8 244 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 CXorf21Q9HAI6 301 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 EQTNQ9NQ60 294 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 FGF21Q9NSA1 209 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 SRPK3Q9UPE1 567 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 MMACHCQ9Y4U1 282 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 AK5Q9Y6K8 562 aa16.02■□□□□ 0.16
HDDC3-206ENST00000561036 MAGEA13PA6NCF6 341 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 KHNYNO15037 678 aaKnown RBP16.01■□□□□ 0.15
HDDC3-206ENST00000561036 ADAMDEC1O15204 470 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 CHRM4P08173 479 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 STT3AP46977 705 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 NUBP1P53384 320 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 DAB2P98082 770 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 PPP2R2BQ00005 443 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 MAT1AQ00266 395 aaKnown RBP16.01■□□□□ 0.15
HDDC3-206ENST00000561036 FUT5Q11128 374 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 MERTKQ12866 999 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 RFX4Q33E94 735 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 GPAT3Q53EU6 434 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 TRMT12Q53H54 448 aaKnown RBP16.01■□□□□ 0.15
HDDC3-206ENST00000561036 OTUD3Q5T2D3 398 aaPredicted RBP16.01■□□□□ 0.15
HDDC3-206ENST00000561036 TTLL10Q6ZVT0 673 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 C16orf62Q7Z3J2 963 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 CHERPQ8IWX8 916 aaKnown RBP16.01■□□□□ 0.15
HDDC3-206ENST00000561036 VWA5B2Q8N398 1253 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 CDRT4Q8N9R6 151 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 OR2I1PQ8NGU4 316 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 IFI44Q8TCB0 444 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 MAGEE2Q8TD90 523 aaPredicted RBP16.01■□□□□ 0.15
HDDC3-206ENST00000561036 APOBEC4Q8WW27 367 aaKnown RBP16.01■□□□□ 0.15
HDDC3-206ENST00000561036 HOXB13Q92826 284 aaPredicted RBP16.01■□□□□ 0.15
HDDC3-206ENST00000561036 SLC35A4Q96G79 324 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 RBM18Q96H35 190 aaKnown RBP16.01■□□□□ 0.15
HDDC3-206ENST00000561036 ZNF354BQ96LW1 612 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 COL21A1Q96P44 957 aa16.01■□□□□ 0.15
HDDC3-206ENST00000561036 GTPBP2Q9BX10 602 aaKnown RBP16.01■□□□□ 0.15
HDDC3-206ENST00000561036 ANKRD60Q9BZ19 345 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms