RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 OR10A5Q9H207 317 aa16.84■□□□□ 0.29
TPM1-226ENST00000560959 DDX31Q9H8H2 851 aaKnown RBP16.84■□□□□ 0.29
TPM1-226ENST00000560959 METTL7AQ9H8H3 244 aa16.84■□□□□ 0.29
TPM1-226ENST00000560959 UBTD1Q9HAC8 227 aa16.84■□□□□ 0.29
TPM1-226ENST00000560959 PRM3Q9NNZ6 103 aa16.84■□□□□ 0.29
TPM1-226ENST00000560959 PSD3Q9NYI0 1048 aa16.84■□□□□ 0.29
TPM1-226ENST00000560959 A0A1W2PNV4 684 aa16.83■□□□□ 0.28
TPM1-226ENST00000560959 A0A1W2PR48 441 aa16.83■□□□□ 0.28
TPM1-226ENST00000560959 WASHC1A8K0Z3 465 aa16.83■□□□□ 0.28
TPM1-226ENST00000560959 PRKRAO75569 313 aaKnown RBP16.83■□□□□ 0.28
TPM1-226ENST00000560959 PPM1BO75688 479 aa16.83■□□□□ 0.28
TPM1-226ENST00000560959 CCDC166P0CW27 439 aa16.83■□□□□ 0.28
TPM1-226ENST00000560959 NR2F6P10588 404 aa16.83■□□□□ 0.28
TPM1-226ENST00000560959 CD1DP15813 335 aa16.83■□□□□ 0.28
TPM1-226ENST00000560959 KRT15P19012 456 aa16.83■□□□□ 0.28
TPM1-226ENST00000560959 PTX3P26022 381 aaPredicted RBP16.83■□□□□ 0.28
TPM1-226ENST00000560959 CD79BP40259 229 aa16.83■□□□□ 0.28
TPM1-226ENST00000560959 PTH2RP49190 550 aa16.83■□□□□ 0.28
TPM1-226ENST00000560959 GFRA1P56159 465 aa16.83■□□□□ 0.28
TPM1-226ENST00000560959 RPS13P62277 151 aaKnown RBP16.83■□□□□ 0.28
TPM1-226ENST00000560959 OR4D1Q15615 310 aa16.83■□□□□ 0.28
TPM1-226ENST00000560959 HP1BP3Q5SSJ5 553 aaPredicted RBP16.83■□□□□ 0.28
TPM1-226ENST00000560959 GRHL2Q6ISB3 625 aa16.83■□□□□ 0.28
TPM1-226ENST00000560959 ANGPTL8Q6UXH0 198 aa16.83■□□□□ 0.28
TPM1-226ENST00000560959 GALNT12Q8IXK2 581 aa16.83■□□□□ 0.28
TPM1-226ENST00000560959 GCNT2Q8N0V5 402 aa16.83■□□□□ 0.28
TPM1-226ENST00000560959 HUS1BQ8NHY5 278 aa16.83■□□□□ 0.28
TPM1-226ENST00000560959 PIK3IP1Q96FE7 263 aa16.83■□□□□ 0.28
TPM1-226ENST00000560959 TSPAN17Q96FV3 270 aa16.83■□□□□ 0.28
TPM1-226ENST00000560959 MARK4Q96L34 752 aa16.83■□□□□ 0.28
TPM1-226ENST00000560959 ACTR8Q9H981 624 aa16.83■□□□□ 0.28
TPM1-226ENST00000560959 ELOVL5Q9NYP7 299 aa16.83■□□□□ 0.28
TPM1-226ENST00000560959 RNF112Q9ULX5 631 aa16.83■□□□□ 0.28
TPM1-226ENST00000560959 DLGAP4Q9Y2H0 992 aa16.83■□□□□ 0.28
TPM1-226ENST00000560959 MRPS18CQ9Y3D5 142 aaKnown RBP16.83■□□□□ 0.28
TPM1-226ENST00000560959 MXRA5Q9NR99 2828 aa16.82■□□□□ 0.28
TPM1-226ENST00000560959 A0A0A6YYD5 115 aa16.82■□□□□ 0.28
TPM1-226ENST00000560959 HCRTR2O43614 444 aa16.82■□□□□ 0.28
TPM1-226ENST00000560959 ICOSLGO75144 302 aa16.82■□□□□ 0.28
TPM1-226ENST00000560959 S100BP04271 92 aaPredicted RBP16.82■□□□□ 0.28
TPM1-226ENST00000560959 FAM58BPP0C7Q3 252 aa16.82■□□□□ 0.28
TPM1-226ENST00000560959 LHX2P50458 406 aa16.82■□□□□ 0.28
TPM1-226ENST00000560959 SRYQ05066 204 aa16.82■□□□□ 0.28
TPM1-226ENST00000560959 OR2A2Q6IF42 318 aa16.82■□□□□ 0.28
TPM1-226ENST00000560959 AAGABQ6PD74 315 aa16.82■□□□□ 0.28
TPM1-226ENST00000560959 SPATA6LQ8N4H0 392 aa16.82■□□□□ 0.28
TPM1-226ENST00000560959 HGDQ93099 445 aa16.82■□□□□ 0.28
TPM1-226ENST00000560959 STARD4Q96DR4 205 aa16.82■□□□□ 0.28
TPM1-226ENST00000560959 DTNBP1Q96EV8 351 aa16.82■□□□□ 0.28
TPM1-226ENST00000560959 UBXN10Q96LJ8 280 aa16.82■□□□□ 0.28
TPM1-226ENST00000560959 MED18Q9BUE0 208 aa16.82■□□□□ 0.28
TPM1-226ENST00000560959 ZNF717Q9BY31 904 aaPredicted RBP16.82■□□□□ 0.28
TPM1-226ENST00000560959 KLHL28Q9NXS3 571 aa16.82■□□□□ 0.28
TPM1-226ENST00000560959 CFL2Q9Y281 166 aa16.82■□□□□ 0.28
TPM1-226ENST00000560959 PCDHGA11Q9Y5H2 935 aa16.82■□□□□ 0.28
TPM1-226ENST00000560959 ANK3Q12955 4377 aaKnown RBP16.82■□□□□ 0.28
TPM1-226ENST00000560959 GLOD5A6NK44 160 aa16.81■□□□□ 0.28
TPM1-226ENST00000560959 PLOD2O00469 737 aa16.81■□□□□ 0.28
TPM1-226ENST00000560959 BSGP35613 385 aa16.81■□□□□ 0.28
TPM1-226ENST00000560959 CPOXP36551 454 aa16.81■□□□□ 0.28
TPM1-226ENST00000560959 PTGDSP41222 190 aa16.81■□□□□ 0.28
TPM1-226ENST00000560959 CUL3Q13618 768 aa16.81■□□□□ 0.28
TPM1-226ENST00000560959 BCL2A1Q16548 175 aa16.81■□□□□ 0.28
TPM1-226ENST00000560959 OR52E8Q6IFG1 317 aa16.81■□□□□ 0.28
TPM1-226ENST00000560959 PLEKHM3Q6ZWE6 761 aa16.81■□□□□ 0.28
TPM1-226ENST00000560959 IFNEQ86WN2 208 aa16.81■□□□□ 0.28
TPM1-226ENST00000560959 GRAMD2AQ8IUY3 354 aa16.81■□□□□ 0.28
TPM1-226ENST00000560959 MEIOBQ8N635 442 aa16.81■□□□□ 0.28
TPM1-226ENST00000560959 WDSUB1Q8N9V3 476 aa16.81■□□□□ 0.28
TPM1-226ENST00000560959 OR14L1PQ8NHC6 308 aa16.81■□□□□ 0.28
TPM1-226ENST00000560959 SLC39A3Q9BRY0 314 aa16.81■□□□□ 0.28
TPM1-226ENST00000560959 OSBPL11Q9BXB4 747 aa16.81■□□□□ 0.28
TPM1-226ENST00000560959 ZNF701Q9NV72 531 aaPredicted RBP16.81■□□□□ 0.28
TPM1-226ENST00000560959 K7EPI3 171 aa16.8■□□□□ 0.28
TPM1-226ENST00000560959 TMPRSS11DO60235 418 aa16.8■□□□□ 0.28
TPM1-226ENST00000560959 EEDO75530 441 aaKnown RBP16.8■□□□□ 0.28
TPM1-226ENST00000560959 CT62P0C5K7 136 aa16.8■□□□□ 0.28
TPM1-226ENST00000560959 ZNF708P17019 499 aa16.8■□□□□ 0.28
TPM1-226ENST00000560959 S1PR1P21453 382 aa16.8■□□□□ 0.28
TPM1-226ENST00000560959 PIK3R1P27986 724 aa16.8■□□□□ 0.28
TPM1-226ENST00000560959 LOXP28300 417 aaPredicted RBP16.8■□□□□ 0.28
TPM1-226ENST00000560959 UGT2B10P36537 528 aa16.8■□□□□ 0.28
TPM1-226ENST00000560959 ARL4CP56559 192 aa16.8■□□□□ 0.28
TPM1-226ENST00000560959 LIPJQ5W064 366 aa16.8■□□□□ 0.28
TPM1-226ENST00000560959 HEPHL1Q6MZM0 1159 aa16.8■□□□□ 0.28
TPM1-226ENST00000560959 CYP20A1Q6UW02 462 aa16.8■□□□□ 0.28
TPM1-226ENST00000560959 PRR22Q8IZ63 422 aa16.8■□□□□ 0.28
TPM1-226ENST00000560959 STAG3L4Q8TBR4 150 aa16.8■□□□□ 0.28
TPM1-226ENST00000560959 UBTD2Q8WUN7 234 aa16.8■□□□□ 0.28
TPM1-226ENST00000560959 CAVIN3Q969G5 261 aa16.8■□□□□ 0.28
TPM1-226ENST00000560959 NXF5Q9H1B4 397 aaKnown RBP16.8■□□□□ 0.28
TPM1-226ENST00000560959 SERHLQ9NQF3 203 aa16.8■□□□□ 0.28
TPM1-226ENST00000560959 OPTCQ9UBM4 332 aa16.8■□□□□ 0.28
TPM1-226ENST00000560959 MTO1Q9Y2Z2 717 aaKnown RBP16.8■□□□□ 0.28
TPM1-226ENST00000560959 LRRC14BA6NHZ5 514 aa16.79■□□□□ 0.28
TPM1-226ENST00000560959 C16orf97H3BN30 126 aa16.79■□□□□ 0.28
TPM1-226ENST00000560959 PGRMC2O15173 223 aa16.79■□□□□ 0.28
TPM1-226ENST00000560959 ACOX3O15254 700 aa16.79■□□□□ 0.28
TPM1-226ENST00000560959 AIFM1O95831 613 aa16.79■□□□□ 0.28
TPM1-226ENST00000560959 TGM6O95932 706 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms