RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 A0A0D9SEW6 157 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 C1orf232A0A0U1RR37 186 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 CXorf51AA0A1B0GTR3 108 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 TMEM247A6NEH6 219 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 ARRDC5A6NEK1 342 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 SLC38A8A6NNN8 435 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 A8MVJ9 347 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 ANKRD66B4E2M5 251 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 E5RI56 91 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 F2RL2O00254 374 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 STX7O15400 261 aaKnown RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 GPR39O43194 453 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 RGS10O43665 173 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 XPNPEP2O43895 674 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 HS6ST1O60243 411 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 SCN2BO60939 215 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 MITFO75030 526 aaPredicted RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 SOCS5O75159 536 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 E2F6O75461 281 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 GMNNO75496 209 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 WBP4O75554 376 aaKnown RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 UPK1BO75841 260 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 CCNDBP1O95273 360 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 PGLSO95336 258 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 SEC24AO95486 1093 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 NADKO95544 446 aaPredicted RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 FADS2O95864 444 aaKnown RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 TBX18O95935 607 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 CD160O95971 181 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 PTTG1O95997 202 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 MT-CO3P00414 261 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 SERPINA1P01009 418 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 KRT6AP02538 564 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 C9P02748 559 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 KRT6BP04259 564 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 FABP3P05413 133 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 RHOCP08134 193 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 ABCB1P08183 1280 aaPredicted RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 CNPP09543 421 aaKnown RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 GSTT2P0CG29 244 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 GSTT2BP0CG30 244 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 PCNAP12004 261 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 MYCLP1P12525 358 aaPredicted RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 BCKDHAP12694 445 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 SLC2A4P14672 509 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 ZNF7P17097 686 aaPredicted RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 ATF6P18850 670 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 EPORP19235 508 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 DGKAP23743 735 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 PPIFP30405 207 aaKnown RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 FMO3P31513 532 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 PCGF2P35227 344 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 HOXD12P35452 270 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 HMGCLP35914 325 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 GGT2P36268 569 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 GGT5P36269 586 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 CASP2P42575 452 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 CDKN2CP42773 168 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 GNPDA1P46926 289 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 SLC6A12P48065 614 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 PPP3CCP48454 512 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 KRT6CP48668 564 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 HSPA7P48741 367 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 TRPC1P48995 793 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 ALDH7A1P49419 539 aaKnown RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 EIF2B2P49770 351 aaKnown RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 RGS4P49798 205 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 DAPP51397 102 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 SGSHP51688 502 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 PPP5CP53041 499 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 CRYBA2P53672 197 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 SLC16A1P53985 500 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 WNT3P56703 355 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 AP1S1P61966 158 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 NCS1P62166 190 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 CSNK2BP67870 215 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 TUBA1BP68363 451 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 VLDLRP98155 873 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 IL5RAQ01344 420 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 PRKCDQ05655 676 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 CD300CQ08708 224 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 TAF10Q12962 218 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 ABRQ12979 859 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 CSTF3Q12996 717 aaKnown RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 ITGADQ13349 1161 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 VEZF1Q14119 521 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 IRF3Q14653 427 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 INAQ16352 499 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 AAK1Q2M2I8 961 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 ZNF181Q2M3W8 571 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 ZNF750Q32MQ0 723 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 C18orf21Q32NC0 220 aaPredicted RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 INAVAQ3KP66 663 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 FBXO43Q4G163 708 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 CTXN3Q4LDR2 81 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 INO80DQ53TQ3 878 aaPredicted RBP2.34□□□□□ -2.03
SPG11-223ENST00000560858 CARD16Q5EG05 197 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 ZRANB3Q5FWF4 1079 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 C10orf120Q5SQS8 335 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 GPRC6AQ5T6X5 926 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms