RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 ADGRE4PQ86SQ3 457 aa16.18■□□□□ 0.18
TSPAN3-208ENST00000560514 IGDCC3Q8IVU1 814 aa16.18■□□□□ 0.18
TSPAN3-208ENST00000560514 RDH11Q8TC12 318 aa16.18■□□□□ 0.18
TSPAN3-208ENST00000560514 ANKRD49Q8WVL7 239 aa16.18■□□□□ 0.18
TSPAN3-208ENST00000560514 OSBPL11Q9BXB4 747 aa16.18■□□□□ 0.18
TSPAN3-208ENST00000560514 OR51B5Q9H339 312 aa16.18■□□□□ 0.18
TSPAN3-208ENST00000560514 GRPEL1Q9HAV7 217 aa16.18■□□□□ 0.18
TSPAN3-208ENST00000560514 ELOVL5Q9NYP7 299 aa16.18■□□□□ 0.18
TSPAN3-208ENST00000560514 CD274Q9NZQ7 290 aa16.18■□□□□ 0.18
TSPAN3-208ENST00000560514 KLRF1Q9NZS2 232 aa16.18■□□□□ 0.18
TSPAN3-208ENST00000560514 CLCF1Q9UBD9 225 aa16.18■□□□□ 0.18
TSPAN3-208ENST00000560514 RNF14Q9UBS8 474 aa16.18■□□□□ 0.18
TSPAN3-208ENST00000560514 MAPRE3Q9UPY8 281 aa16.18■□□□□ 0.18
TSPAN3-208ENST00000560514 RAI1Q7Z5J4 1906 aaPredicted RBP16.17■□□□□ 0.18
TSPAN3-208ENST00000560514 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.17■□□□□ 0.18
TSPAN3-208ENST00000560514 PLOD2O00469 737 aa16.17■□□□□ 0.18
TSPAN3-208ENST00000560514 CBR3O75828 277 aa16.17■□□□□ 0.18
TSPAN3-208ENST00000560514 TNFSF13O75888 250 aa16.17■□□□□ 0.18
TSPAN3-208ENST00000560514 CRHP06850 196 aa16.17■□□□□ 0.18
TSPAN3-208ENST00000560514 SLC35E2BP0CK96 405 aa16.17■□□□□ 0.18
TSPAN3-208ENST00000560514 SLC35E2P0CK97 266 aa16.17■□□□□ 0.18
TSPAN3-208ENST00000560514 NR2F6P10588 404 aa16.17■□□□□ 0.18
TSPAN3-208ENST00000560514 ABCD3P28288 659 aa16.17■□□□□ 0.18
TSPAN3-208ENST00000560514 UGT2B10P36537 528 aa16.17■□□□□ 0.18
TSPAN3-208ENST00000560514 HNRNPH2P55795 449 aaKnown RBP16.17■□□□□ 0.18
TSPAN3-208ENST00000560514 CDKL4Q5MAI5 379 aa16.17■□□□□ 0.18
TSPAN3-208ENST00000560514 DEPDC1Q5TB30 811 aa16.17■□□□□ 0.18
TSPAN3-208ENST00000560514 OR2A2Q6IF42 318 aa16.17■□□□□ 0.18
TSPAN3-208ENST00000560514 TRMT10BQ6PF06 316 aaKnown RBP16.17■□□□□ 0.18
TSPAN3-208ENST00000560514 CYP20A1Q6UW02 462 aa16.17■□□□□ 0.18
TSPAN3-208ENST00000560514 ZCCHC7Q8N3Z6 543 aaKnown RBP16.17■□□□□ 0.18
TSPAN3-208ENST00000560514 HS3ST6Q96QI5 342 aa16.17■□□□□ 0.18
TSPAN3-208ENST00000560514 DERL2Q9GZP9 239 aa16.17■□□□□ 0.18
TSPAN3-208ENST00000560514 SERHLQ9NQF3 203 aa16.17■□□□□ 0.18
TSPAN3-208ENST00000560514 ADGRE2Q9UHX3 823 aa16.17■□□□□ 0.18
TSPAN3-208ENST00000560514 PTBP2Q9UKA9 531 aaKnown RBP16.17■□□□□ 0.18
TSPAN3-208ENST00000560514 TEX264Q9Y6I9 313 aa16.17■□□□□ 0.18
TSPAN3-208ENST00000560514 USF3Q68DE3 2245 aa16.17■□□□□ 0.18
TSPAN3-208ENST00000560514 GLOD5A6NK44 160 aa16.16■□□□□ 0.18
TSPAN3-208ENST00000560514 C16orf97H3BN30 126 aa16.16■□□□□ 0.18
TSPAN3-208ENST00000560514 TMCC2O75069 709 aa16.16■□□□□ 0.18
TSPAN3-208ENST00000560514 CLPSP04118 112 aa16.16■□□□□ 0.18
TSPAN3-208ENST00000560514 RHOXF2BP0C7M4 288 aa16.16■□□□□ 0.18
TSPAN3-208ENST00000560514 CASP2P42575 452 aa16.16■□□□□ 0.18
TSPAN3-208ENST00000560514 TNK1Q13470 666 aa16.16■□□□□ 0.18
TSPAN3-208ENST00000560514 VEZF1Q14119 521 aa16.16■□□□□ 0.18
TSPAN3-208ENST00000560514 HP1BP3Q5SSJ5 553 aaPredicted RBP16.16■□□□□ 0.18
TSPAN3-208ENST00000560514 STEAP4Q687X5 459 aa16.16■□□□□ 0.18
TSPAN3-208ENST00000560514 ZNF550Q7Z398 422 aa16.16■□□□□ 0.18
TSPAN3-208ENST00000560514 ZC3HC1Q86WB0 502 aaKnown RBP16.16■□□□□ 0.18
TSPAN3-208ENST00000560514 CREG2Q8IUH2 290 aa16.16■□□□□ 0.18
TSPAN3-208ENST00000560514 GALNT12Q8IXK2 581 aa16.16■□□□□ 0.18
TSPAN3-208ENST00000560514 PGM2Q96G03 612 aa16.16■□□□□ 0.18
TSPAN3-208ENST00000560514 OR2B2Q9GZK3 357 aa16.16■□□□□ 0.18
TSPAN3-208ENST00000560514 OR10A5Q9H207 317 aa16.16■□□□□ 0.18
TSPAN3-208ENST00000560514 CXorf21Q9HAI6 301 aa16.16■□□□□ 0.18
TSPAN3-208ENST00000560514 PLAC1Q9HBJ0 212 aa16.16■□□□□ 0.18
TSPAN3-208ENST00000560514 POPDC3Q9HBV1 291 aa16.16■□□□□ 0.18
TSPAN3-208ENST00000560514 LYARQ9NX58 379 aaKnown RBP16.16■□□□□ 0.18
TSPAN3-208ENST00000560514 TAS2R10Q9NYW0 307 aa16.16■□□□□ 0.18
TSPAN3-208ENST00000560514 EXO1Q9UQ84 846 aaKnown RBP16.16■□□□□ 0.18
TSPAN3-208ENST00000560514 CHMP2BQ9UQN3 213 aa16.16■□□□□ 0.18
TSPAN3-208ENST00000560514 DLGAP4Q9Y2H0 992 aa16.16■□□□□ 0.18
TSPAN3-208ENST00000560514 C2orf72A6NCS6 295 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 CCDC188H7C350 402 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 ICOSLGO75144 302 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 PPM1BO75688 479 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 ABCB1P08183 1280 aaPredicted RBP16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 ROS1P08922 2347 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 PAX1P15863 534 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 EPB42P16452 691 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 PIK3R1P27986 724 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 ELK3P41970 407 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 STARP49675 285 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 NR1H2P55055 460 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 ARL4CP56559 192 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 PHEXP78562 749 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 DR1Q01658 176 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 LRRC70Q7Z2Q7 622 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 NUP54Q7Z3B4 507 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 LAS2Q8IYD9 372 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 C17orf47Q8NEP4 570 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 OR7G3Q8NG95 312 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 ADIPOR1Q96A54 375 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 STARD4Q96DR4 205 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 SFXN2Q96NB2 322 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 PIGQQ9BRB3 760 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 OPN3Q9H1Y3 402 aaPredicted RBP16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 MOCS1Q9NZB8 636 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 WIF1Q9Y5W5 379 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 PSAT1Q9Y617 370 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 SAR1BQ9Y6B6 198 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 NBEAL1Q6ZS30 2694 aa16.15■□□□□ 0.18
TSPAN3-208ENST00000560514 UQCRHLA0A096LP55 91 aa16.14■□□□□ 0.17
TSPAN3-208ENST00000560514 RNF223E7ERA6 249 aa16.14■□□□□ 0.17
TSPAN3-208ENST00000560514 TLX2O43763 284 aaPredicted RBP16.14■□□□□ 0.17
TSPAN3-208ENST00000560514 TGM6O95932 706 aa16.14■□□□□ 0.17
TSPAN3-208ENST00000560514 NAGAP17050 411 aa16.14■□□□□ 0.17
TSPAN3-208ENST00000560514 MGAT5Q09328 741 aa16.14■□□□□ 0.17
TSPAN3-208ENST00000560514 SNTA1Q13424 505 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms