RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 DSTNP60981 165 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 AP2B1P63010 937 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 RHDQ02161 417 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 RBBP4Q09028 425 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 MGAT2Q10469 447 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 VEZF1Q14119 521 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 MINDY4Q4G0A6 757 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 TRMT12Q53H54 448 aaKnown RBP10.5□□□□□ -0.73
USP3-218ENST00000560202 GCNT6Q5T4J0 391 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 FHL5Q5TD97 284 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 HES3Q5TGS1 186 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 FOXB2Q5VYV0 432 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 TNFAIP8L2Q6P589 184 aaPredicted RBP10.5□□□□□ -0.73
USP3-218ENST00000560202 AAGABQ6PD74 315 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 DGAT2L6Q6ZPD8 337 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 AQP12AQ8IXF9 295 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 OR2L13Q8N349 312 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 HORMAD2Q8N7B1 307 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 DOK4Q8TEW6 326 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 MAL2Q969L2 176 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 PMEPA1Q969W9 287 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 NSMCE2Q96MF7 247 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 DGAT2Q96PD7 388 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 DEPDC7Q96QD5 511 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 TGIF2Q9GZN2 237 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 SERHL2Q9H4I8 314 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 TMEM38AQ9H6F2 299 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 GORASP2Q9H8Y8 452 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 CXorf21Q9HAI6 301 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 MAT2BQ9NZL9 334 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 CTSFQ9UBX1 484 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 CROCCQ5TZA2 2017 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 MUC6Q6W4X9 2439 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 IGKV3D-11A0A0A0MRZ8 115 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 TCRBV3S1A0A5B6 114 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 H0Y3Z8 333 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 DLL1O00548 723 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 PLOD3O60568 738 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 CREG1O75629 220 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 C8BP07358 591 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 IFI6P09912 130 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 CT62P0C5K7 136 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 AGXTP21549 392 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 PCGF2P35227 344 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 ETV5P41161 510 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 MAPK10P53779 464 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 RAB15P59190 212 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 MRPS22P82650 360 aaKnown RBP10.49□□□□□ -0.73
USP3-218ENST00000560202 RHAGQ02094 409 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 OCA2Q04671 838 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 MAP4K2Q12851 820 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 LASP1Q14847 261 aaKnown RBP10.49□□□□□ -0.73
USP3-218ENST00000560202 DCAF12Q5T6F0 453 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 OVCH1Q7RTY7 1134 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 GALNT12Q8IXK2 581 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 PRSS58Q8IYP2 241 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 C11orf65Q8NCR3 313 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 C7orf57Q8NEG2 295 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 STT3BQ8TCJ2 826 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 NETO1Q8TDF5 533 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 PYDC1Q8WXC3 89 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 RIT1Q92963 219 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 NCLNQ969V3 563 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 FAM162AQ96A26 154 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 CTHRC1Q96CG8 243 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 GIMAP5Q96F15 307 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 C16orf58Q96GQ5 468 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 LRFN5Q96NI6 719 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 MS4A4EQ96PG1 132 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 PELOQ9BRX2 385 aaKnown RBP10.49□□□□□ -0.73
USP3-218ENST00000560202 ULBP3Q9BZM4 244 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 OR51I1Q9H343 314 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 S100A14Q9HCY8 104 aa10.49□□□□□ -0.73
USP3-218ENST00000560202 IFT80Q9P2H3 777 aaPredicted RBP10.49□□□□□ -0.73
USP3-218ENST00000560202 C19orf53Q9UNZ5 99 aaPredicted RBP10.49□□□□□ -0.73
USP3-218ENST00000560202 CCDC187A0A096LP49 1063 aa10.48□□□□□ -0.73
USP3-218ENST00000560202 SPAARA0A1B0GVQ0 90 aa10.48□□□□□ -0.73
USP3-218ENST00000560202 TCRBV5S2A0A599 114 aa10.48□□□□□ -0.73
USP3-218ENST00000560202 HMGN4O00479 90 aa10.48□□□□□ -0.73
USP3-218ENST00000560202 DKK1O94907 266 aa10.48□□□□□ -0.73
USP3-218ENST00000560202 RECKO95980 971 aa10.48□□□□□ -0.73
USP3-218ENST00000560202 IFNA16P05015 189 aa10.48□□□□□ -0.73
USP3-218ENST00000560202 ZGLP1P0C6A0 271 aa10.48□□□□□ -0.73
USP3-218ENST00000560202 FTH1P19P0C7X4 201 aa10.48□□□□□ -0.73
USP3-218ENST00000560202 JMJD7P0C870 316 aa10.48□□□□□ -0.73
USP3-218ENST00000560202 OR12D1P0DN82 309 aa10.48□□□□□ -0.73
USP3-218ENST00000560202 CSRP1P21291 193 aaKnown RBP10.48□□□□□ -0.73
USP3-218ENST00000560202 GALNSP34059 522 aa10.48□□□□□ -0.73
USP3-218ENST00000560202 KHKP50053 298 aa10.48□□□□□ -0.73
USP3-218ENST00000560202 ANXA11P50995 505 aaKnown RBP10.48□□□□□ -0.73
USP3-218ENST00000560202 EFNA3P52797 238 aa10.48□□□□□ -0.73
USP3-218ENST00000560202 EEF1A2Q05639 463 aaKnown RBP10.48□□□□□ -0.73
USP3-218ENST00000560202 EIF3IQ13347 325 aaKnown RBP10.48□□□□□ -0.73
USP3-218ENST00000560202 SCARB2Q14108 478 aa10.48□□□□□ -0.73
USP3-218ENST00000560202 MYBPC3Q14896 1274 aa10.48□□□□□ -0.73
USP3-218ENST00000560202 ZNF630Q2M218 657 aaPredicted RBP10.48□□□□□ -0.73
USP3-218ENST00000560202 LAPTM4BQ86VI4 370 aa10.48□□□□□ -0.73
USP3-218ENST00000560202 VWA5B2Q8N398 1253 aa10.48□□□□□ -0.73
USP3-218ENST00000560202 GOLM1Q8NBJ4 401 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms