RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 KLHL29Q96CT2 875 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 NTNG2Q96CW9 530 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 MTBPQ96DY7 904 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 RILPQ96NA2 401 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 NODALQ96S42 347 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 DOHHQ9BU89 302 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.26■□□□□ 0.19
HDDC3-205ENST00000559898 ALKBH4Q9NXW9 302 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 COQ3Q9NZJ6 369 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 PSMC3IPQ9P2W1 217 aaPredicted RBP16.26■□□□□ 0.19
HDDC3-205ENST00000559898 VPS29Q9UBQ0 182 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 Q9UFV3 132 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 ACAD8Q9UKU7 415 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 PLLPQ9Y342 182 aa16.26■□□□□ 0.19
HDDC3-205ENST00000559898 C1orf226A1L170 272 aa16.25■□□□□ 0.19
HDDC3-205ENST00000559898 IGFBP2P18065 325 aa16.25■□□□□ 0.19
HDDC3-205ENST00000559898 TAC1P20366 129 aa16.25■□□□□ 0.19
HDDC3-205ENST00000559898 PTGDSP41222 190 aa16.25■□□□□ 0.19
HDDC3-205ENST00000559898 MAP4K2Q12851 820 aa16.25■□□□□ 0.19
HDDC3-205ENST00000559898 SNTB1Q13884 538 aaKnown RBP16.25■□□□□ 0.19
HDDC3-205ENST00000559898 TMEM211Q6ICI0 200 aa16.25■□□□□ 0.19
HDDC3-205ENST00000559898 VWA5B2Q8N398 1253 aa16.25■□□□□ 0.19
HDDC3-205ENST00000559898 OR52R1Q8NGF1 315 aa16.25■□□□□ 0.19
HDDC3-205ENST00000559898 METTL6Q8TCB7 284 aa16.25■□□□□ 0.19
HDDC3-205ENST00000559898 KAT2AQ92830 837 aa16.25■□□□□ 0.19
HDDC3-205ENST00000559898 TP53INP1Q96A56 240 aa16.25■□□□□ 0.19
HDDC3-205ENST00000559898 L3HYPDHQ96EM0 354 aa16.25■□□□□ 0.19
HDDC3-205ENST00000559898 GNRHR2Q96P88 292 aa16.25■□□□□ 0.19
HDDC3-205ENST00000559898 TREX2Q9BQ50 279 aaPredicted RBP16.25■□□□□ 0.19
HDDC3-205ENST00000559898 EXO5Q9H790 373 aa16.25■□□□□ 0.19
HDDC3-205ENST00000559898 CNIH4Q9P003 139 aa16.25■□□□□ 0.19
HDDC3-205ENST00000559898 BCAP29Q9UHQ4 241 aa16.25■□□□□ 0.19
HDDC3-205ENST00000559898 DLGAP4Q9Y2H0 992 aa16.25■□□□□ 0.19
HDDC3-205ENST00000559898 SLC6A5Q9Y345 797 aa16.25■□□□□ 0.19
HDDC3-205ENST00000559898 POLQO75417 2590 aa16.25■□□□□ 0.19
HDDC3-205ENST00000559898 OR14I1A6ND48 311 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 SMIM23A6NLE4 172 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 C17orf51A8MQB3 221 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 KIF2AO00139 706 aaPredicted RBP16.24■□□□□ 0.19
HDDC3-205ENST00000559898 GNB5O14775 395 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 BCKDKO14874 412 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 SUSD5O60279 629 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 ATP1B1P05026 303 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 ABCB1P08183 1280 aaPredicted RBP16.24■□□□□ 0.19
HDDC3-205ENST00000559898 GDF1P27539 372 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 ABCD3P28288 659 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 HMOX2P30519 316 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 CHRNB4P30926 498 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 CASP3P42574 277 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 EMDP50402 254 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 RASA2Q15283 850 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 RPS6KA2Q15349 733 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 DCST1Q5T197 706 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 LGSNQ5TDP6 509 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 HLA-DQA1Q5Y7H0 255 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 CCDC116Q8IYX3 515 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 TAGAPQ8N103 731 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 C7orf57Q8NEG2 295 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 OR10Q1Q8NGQ4 319 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 HGDQ93099 445 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 EXOSC8Q96B26 276 aaKnown RBP16.24■□□□□ 0.19
HDDC3-205ENST00000559898 CTHRC1Q96CG8 243 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 ANGPTL4Q9BY76 406 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 SHCBP1LQ9BZQ2 653 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 GALNT9Q9HCQ5 603 aa16.24■□□□□ 0.19
HDDC3-205ENST00000559898 BOKQ9UMX3 212 aaPredicted RBP16.24■□□□□ 0.19
HDDC3-205ENST00000559898 B4DXG7 233 aa16.23■□□□□ 0.19
HDDC3-205ENST00000559898 PCDH7O60245 1069 aa16.23■□□□□ 0.19
HDDC3-205ENST00000559898 PROCP04070 461 aa16.23■□□□□ 0.19
HDDC3-205ENST00000559898 CSNK2A2P19784 350 aaPredicted RBP16.23■□□□□ 0.19
HDDC3-205ENST00000559898 POU3F2P20265 443 aaPredicted RBP16.23■□□□□ 0.19
HDDC3-205ENST00000559898 DEKP35659 375 aaKnown RBP16.23■□□□□ 0.19
HDDC3-205ENST00000559898 CSTF3Q12996 717 aaKnown RBP16.23■□□□□ 0.19
HDDC3-205ENST00000559898 EIPR1Q53HC9 387 aa16.23■□□□□ 0.19
HDDC3-205ENST00000559898 ZNF628Q5EBL2 1059 aa16.23■□□□□ 0.19
HDDC3-205ENST00000559898 C10orf62Q5T681 223 aaPredicted RBP16.23■□□□□ 0.19
HDDC3-205ENST00000559898 C1orf185Q5T7R7 199 aa16.23■□□□□ 0.19
HDDC3-205ENST00000559898 B3GNT6Q6ZMB0 384 aa16.23■□□□□ 0.19
HDDC3-205ENST00000559898 CCNYL1Q8N7R7 359 aa16.23■□□□□ 0.19
HDDC3-205ENST00000559898 OR7G1Q8NGA0 311 aa16.23■□□□□ 0.19
HDDC3-205ENST00000559898 OR9A2Q8NGT5 310 aa16.23■□□□□ 0.19
HDDC3-205ENST00000559898 NEIL3Q8TAT5 605 aa16.23■□□□□ 0.19
HDDC3-205ENST00000559898 EPS8L3Q8TE67 593 aaKnown RBP16.23■□□□□ 0.19
HDDC3-205ENST00000559898 C16orf78Q8WTQ4 265 aa16.23■□□□□ 0.19
HDDC3-205ENST00000559898 C11orf24Q96F05 449 aaPredicted RBP16.23■□□□□ 0.19
HDDC3-205ENST00000559898 ZNF597Q96LX8 424 aa16.23■□□□□ 0.19
HDDC3-205ENST00000559898 SPOCK3Q9BQ16 436 aa16.23■□□□□ 0.19
HDDC3-205ENST00000559898 UBQLN3Q9H347 655 aa16.23■□□□□ 0.19
HDDC3-205ENST00000559898 MID1IP1Q9NPA3 183 aa16.23■□□□□ 0.19
HDDC3-205ENST00000559898 MCM8Q9UJA3 840 aa16.23■□□□□ 0.19
HDDC3-205ENST00000559898 UTS2RQ9UKP6 389 aa16.23■□□□□ 0.19
HDDC3-205ENST00000559898 PTGDR2Q9Y5Y4 395 aa16.23■□□□□ 0.19
HDDC3-205ENST00000559898 HCN1O60741 890 aa16.22■□□□□ 0.19
HDDC3-205ENST00000559898 UGT2B11O75310 529 aa16.22■□□□□ 0.19
HDDC3-205ENST00000559898 ULK1O75385 1050 aa16.22■□□□□ 0.19
HDDC3-205ENST00000559898 KRT6AP02538 564 aa16.22■□□□□ 0.19
HDDC3-205ENST00000559898 KRT6BP04259 564 aa16.22■□□□□ 0.19
HDDC3-205ENST00000559898 MSX1P28360 303 aa16.22■□□□□ 0.19
HDDC3-205ENST00000559898 KRT6CP48668 564 aa16.22■□□□□ 0.19
HDDC3-205ENST00000559898 DLX5P56178 289 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms