RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 BTG3Q14201 252 aaPredicted RBP3.13□□□□□ -1.91
SPG11-218ENST00000559754 HEPACAMQ14CZ8 416 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 EXOSC7Q15024 291 aaKnown RBP3.13□□□□□ -1.91
SPG11-218ENST00000559754 NECTIN1Q15223 517 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 PPP1R7Q15435 360 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 ZNF528Q3MIS6 628 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 DCAF4L1Q3SXM0 396 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 MPPE1Q53F39 396 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 PDLIM3Q53GG5 364 aaPredicted RBP3.13□□□□□ -1.91
SPG11-218ENST00000559754 HSP90AB3PQ58FF7 597 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 ZNF776Q68DI1 518 aaPredicted RBP3.13□□□□□ -1.91
SPG11-218ENST00000559754 ASPHD2Q6ICH7 369 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 SLC39A4Q6P5W5 647 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 PAQR6Q6TCH4 344 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 G2E3Q7L622 706 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 ERASQ7Z444 233 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 NANOGNBQ7Z5D8 188 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 CBWD2Q8IUF1 395 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 CDK20Q8IZL9 346 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 KIRREL3Q8IZU9 778 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 DCLK2Q8N568 766 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 OR10G8Q8NGN5 311 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 OR4L1Q8NH43 312 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 OR52N5Q8NH56 324 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 AGR3Q8TD06 166 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 SLCO2A1Q92959 643 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 MRPL53Q96EL3 112 aaKnown RBP3.13□□□□□ -1.91
SPG11-218ENST00000559754 VPS35Q96QK1 796 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 RAB40CQ96S21 281 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 UBAC1Q9BSL1 405 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 CCM2Q9BSQ5 444 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 URM1Q9BTM9 101 aaKnown RBP3.13□□□□□ -1.91
SPG11-218ENST00000559754 LRRC61Q9BV99 259 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 FUNDC2Q9BWH2 189 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 RBM24Q9BX46 236 aaKnown RBP3.13□□□□□ -1.91
SPG11-218ENST00000559754 DGCR6LQ9BY27 220 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 SLC26A1Q9H2B4 701 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 CPVLQ9H3G5 476 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 DPEP2Q9H4A9 486 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 FAM124BQ9H5Z6 455 aaPredicted RBP3.13□□□□□ -1.91
SPG11-218ENST00000559754 ATP13A3Q9H7F0 1226 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 FN3KRPQ9HA64 309 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 RDH8Q9NYR8 311 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 ERVK-18Q9QC07 812 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 P2RX2Q9UBL9 471 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 LHX3Q9UBR4 397 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 RNF14Q9UBS8 474 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 PILRAQ9UKJ1 303 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 KLK13Q9UKR3 277 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 PLCL2Q9UPR0 1127 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 NCKAP1Q9Y2A7 1128 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 ATG4BQ9Y4P1 393 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 CSAG2Q9Y5P2 127 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 FGD5Q6ZNL6 1462 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 WDR19Q8NEZ3 1342 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 FAM240BA0A1B0GVZ2 78 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 RNF222A6NCQ9 220 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 CCL24O00175 119 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 MED7O43513 233 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 BUB1O43683 1085 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 UFL1O94874 794 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 NDUFA7O95182 113 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 MT-ND1P03886 318 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 CSF2P04141 144 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 CAPN1P07384 714 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 IGHV4-31P0DP07 118 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 CCDC130P13994 396 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 PAX7P23759 505 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 GJB2P29033 226 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 RBMS1P29558 406 aaKnown RBP3.12□□□□□ -1.91
SPG11-218ENST00000559754 ALDH1B1P30837 517 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 CCR1P32246 355 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 PPT1P50897 306 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 PAX9P55771 341 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 B3GALT5-AS1P59052 145 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 MS4A2Q01362 244 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 CNTN2Q02246 1040 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 MFGE8Q08431 387 aaPredicted RBP3.12□□□□□ -1.91
SPG11-218ENST00000559754 HSPA14Q0VDF9 509 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 GPR50Q13585 617 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 ENPP2Q13822 863 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 CEACAM7Q14002 265 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 SELPLGQ14242 412 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 MEF2DQ14814 521 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 RCN1Q15293 331 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 TRIP10Q15642 601 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 TCTEX1D4Q5JR98 221 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 RABGAP1LQ5R372 815 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 LIPKQ5VXJ0 399 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 SLC27A4Q6P1M0 643 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 CENPUQ71F23 418 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 LHFPL4Q7Z7J7 247 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 SLC22A16Q86VW1 577 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 CDC20BQ86Y33 519 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 TTC5Q8N0Z6 440 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 OR52J3Q8NH60 311 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 TRMT10AQ8TBZ6 339 aaKnown RBP3.12□□□□□ -1.91
SPG11-218ENST00000559754 PIK3R3Q92569 461 aa3.12□□□□□ -1.91
SPG11-218ENST00000559754 GTF3AQ92664 365 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms