RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 SORBS1Q9BX66 1292 aaKnown RBP3.06□□□□□ -1.92
HERC1-203ENST00000558532 NUSAP1Q9BXS6 441 aaKnown RBP3.06□□□□□ -1.92
HERC1-203ENST00000558532 MRPL9Q9BYD2 267 aaKnown RBP3.06□□□□□ -1.92
HERC1-203ENST00000558532 SRRQ9GZT4 340 aa3.06□□□□□ -1.92
HERC1-203ENST00000558532 ADNPQ9H2P0 1102 aa3.06□□□□□ -1.92
HERC1-203ENST00000558532 TMEM245Q9H330 911 aa3.06□□□□□ -1.92
HERC1-203ENST00000558532 OR51B5Q9H339 312 aa3.06□□□□□ -1.92
HERC1-203ENST00000558532 POMKQ9H5K3 350 aa3.06□□□□□ -1.92
HERC1-203ENST00000558532 DHX35Q9H5Z1 703 aaKnown RBP3.06□□□□□ -1.92
HERC1-203ENST00000558532 AAMDCQ9H7C9 122 aa3.06□□□□□ -1.92
HERC1-203ENST00000558532 CAB39LQ9H9S4 337 aa3.06□□□□□ -1.92
HERC1-203ENST00000558532 SCPEP1Q9HB40 452 aa3.06□□□□□ -1.92
HERC1-203ENST00000558532 CYP3A43Q9HB55 503 aa3.06□□□□□ -1.92
HERC1-203ENST00000558532 RANGRFQ9HD47 186 aaPredicted RBP3.06□□□□□ -1.92
HERC1-203ENST00000558532 WDR6Q9NNW5 1121 aaKnown RBP3.06□□□□□ -1.92
HERC1-203ENST00000558532 GKN1Q9NS71 199 aa3.06□□□□□ -1.92
HERC1-203ENST00000558532 DDX28Q9NUL7 540 aaKnown RBP3.06□□□□□ -1.92
HERC1-203ENST00000558532 FAM49BQ9NUQ9 324 aa3.06□□□□□ -1.92
HERC1-203ENST00000558532 POT1Q9NUX5 634 aa3.06□□□□□ -1.92
HERC1-203ENST00000558532 AIG1Q9NVV5 245 aa3.06□□□□□ -1.92
HERC1-203ENST00000558532 MED9Q9NWA0 146 aa3.06□□□□□ -1.92
HERC1-203ENST00000558532 GTSE1Q9NYZ3 720 aa3.06□□□□□ -1.92
HERC1-203ENST00000558532 GGA3Q9NZ52 723 aa3.06□□□□□ -1.92
HERC1-203ENST00000558532 PCSK1NQ9UHG2 260 aa3.06□□□□□ -1.92
HERC1-203ENST00000558532 TRMT6Q9UJA5 497 aaKnown RBP3.06□□□□□ -1.92
HERC1-203ENST00000558532 LEF1Q9UJU2 399 aaPredicted RBP3.06□□□□□ -1.92
HERC1-203ENST00000558532 STUB1Q9UNE7 303 aa3.06□□□□□ -1.92
HERC1-203ENST00000558532 SNX6Q9UNH7 406 aa3.06□□□□□ -1.92
HERC1-203ENST00000558532 DIMT1Q9UNQ2 313 aaKnown RBP3.06□□□□□ -1.92
HERC1-203ENST00000558532 RNF6Q9Y252 685 aa3.06□□□□□ -1.92
HERC1-203ENST00000558532 ACOT9Q9Y305 439 aa3.06□□□□□ -1.92
HERC1-203ENST00000558532 ZNF175Q9Y473 711 aa3.06□□□□□ -1.92
HERC1-203ENST00000558532 KCNE2Q9Y6J6 123 aa3.06□□□□□ -1.92
HERC1-203ENST00000558532 TRIP11Q15643 1979 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 OTOFQ9HC10 1997 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 ANKRD31Q8N7Z5 1873 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 TBC1D3DA0A087WVF3 549 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 TBC1D3IA0A087WXS9 549 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 TBC1D3EA0A087X179 549 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 TBC1D3KA0A087X1G2 549 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 KRT87PA6NCN2 255 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 TBC1D3BA6NDS4 549 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 FAM90A10PA6NDY2 464 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 CXorf65A6NEN9 183 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 TBC1D3FA6NER0 549 aaPredicted RBP3.05□□□□□ -1.92
HERC1-203ENST00000558532 B4DGG1 531 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 TBC1D3LB9A6J9 549 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 G3V2T6 193 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 RHODO00212 210 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 IFRD1O00458 451 aaPredicted RBP3.05□□□□□ -1.92
HERC1-203ENST00000558532 NR5A2O00482 541 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 STX16O14662 325 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 ANKRD28O15084 1053 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 XPNPEP2O43895 674 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 AIREO43918 545 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 MFSD11O43934 449 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 VPS26AO75436 327 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 WBP4O75554 376 aaKnown RBP3.05□□□□□ -1.92
HERC1-203ENST00000558532 OR2B3O76000 313 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 NEURL1O76050 574 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 SLC22A5O76082 557 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 OR4F21O95013 312 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 SCELO95171 688 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 CELF2O95319 508 aaKnown RBP3.05□□□□□ -1.92
HERC1-203ENST00000558532 PAPSS2O95340 614 aaPredicted RBP3.05□□□□□ -1.92
HERC1-203ENST00000558532 GH2P01242 217 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 CSTBP04080 98 aaKnown RBP3.05□□□□□ -1.92
HERC1-203ENST00000558532 SEMG1P04279 462 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 HMGN1P05114 100 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 RPLP0P05388 317 aaKnown RBP3.05□□□□□ -1.92
HERC1-203ENST00000558532 RPS17P08708 135 aaKnown RBP3.05□□□□□ -1.92
HERC1-203ENST00000558532 TBC1D3HP0C7X1 549 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 ADORA3P0DMS8 318 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 RRASP10301 218 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 PSKH1P11801 424 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 ODC1P11926 461 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 ARSAP15289 507 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 CD36P16671 472 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 STMN1P16949 149 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 HOXB9P17482 250 aaPredicted RBP3.05□□□□□ -1.92
HERC1-203ENST00000558532 LBPP18428 481 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 ZP3P21754 424 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 CD72P21854 359 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 KCNA5P22460 613 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 PSMB9P28065 219 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 PSMB4P28070 264 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 ALDH4A1P30038 563 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 HOXA9P31269 272 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 FMO4P31512 558 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 CA5AP35218 305 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 KRT20P35900 424 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 ARL2P36404 184 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 MTHFRP42898 656 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 MAP2K4P45985 399 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 ACOT2P49753 483 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 SERPINH1P50454 418 aaKnown RBP3.05□□□□□ -1.92
HERC1-203ENST00000558532 SUOXP51687 545 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 CLCN5P51795 746 aa3.05□□□□□ -1.92
HERC1-203ENST00000558532 GBX2P52951 348 aaPredicted RBP3.05□□□□□ -1.92
HERC1-203ENST00000558532 ADPRHP54922 357 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms