RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 TRMT6Q9UJA5 497 aaKnown RBP5.38□□□□□ -1.55
VPS33B-207ENST00000557470 ATG4BQ9Y4P1 393 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 CAPN6Q9Y6Q1 641 aa5.38□□□□□ -1.55
VPS33B-207ENST00000557470 LOC100289279A0A1B0GTE1 492 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 PGPEP1LA6NFU8 196 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 URADA6NGE7 173 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 LRRC3CA6NJW4 275 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 TRIM64CA6NLI5 447 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 EEF1E1-BLOC1S5C9J1V9 151 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 INAFM1C9JVW0 142 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 H7C1Q1 480 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 CLDN4O14493 209 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 GSC2O15499 205 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 EEF1E1O43324 174 aaKnown RBP5.37□□□□□ -1.55
VPS33B-207ENST00000557470 IFNA16P05015 189 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 SERPINA6P08185 405 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 HIST1H2AGP0C0S8 130 aaPredicted RBP5.37□□□□□ -1.55
VPS33B-207ENST00000557470 HIST1H2ADP20671 130 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 SAT1P21673 171 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 HNRNPH1P31943 449 aaKnown RBP5.37□□□□□ -1.55
VPS33B-207ENST00000557470 CEACAM8P31997 349 aaPredicted RBP5.37□□□□□ -1.55
VPS33B-207ENST00000557470 ATP6V1E1P36543 226 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 KCNJ1P48048 391 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 TRPC1P48995 793 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 RGS4P49798 205 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 ZNF136P52737 540 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 PGGT1BP53609 377 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 SLC16A1P53985 500 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 CDKN2DP55273 166 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 RAB38P57729 211 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 BPIFB3P59826 476 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 RNF4P78317 190 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 CCZ1BP86790 482 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 CCZ1P86791 482 aaPredicted RBP5.37□□□□□ -1.55
VPS33B-207ENST00000557470 BMPR2Q13873 1038 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 CSHL1Q14406 222 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 RBBP5Q15291 538 aaKnown RBP5.37□□□□□ -1.55
VPS33B-207ENST00000557470 TRIP13Q15645 432 aaPredicted RBP5.37□□□□□ -1.55
VPS33B-207ENST00000557470 ELAVL1Q15717 326 aaKnown RBP5.37□□□□□ -1.55
VPS33B-207ENST00000557470 HSP90B2PQ58FF3 399 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 PRAMEF20Q5VT98 475 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 ANKRD22Q5VYY1 191 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 UGT3A1Q6NUS8 523 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 FDX2Q6P4F2 183 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 DRICH1Q6PGQ1 229 aaPredicted RBP5.37□□□□□ -1.55
VPS33B-207ENST00000557470 PAQR3Q6TCH7 311 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 C4orf22Q6V702 233 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 BEND4Q6ZU67 534 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 GSTA5Q7RTV2 222 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 TMEM132CQ8N3T6 1108 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 PPM1NQ8N819 430 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 TRPV3Q8NET8 790 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 NEIL3Q8TAT5 605 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 PTPMT1Q8WUK0 201 aaPredicted RBP5.37□□□□□ -1.55
VPS33B-207ENST00000557470 FBXL8Q96CD0 374 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 LINGO1Q96FE5 620 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 HIST1H2AHQ96KK5 128 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 CSF3RQ99062 836 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 HIST1H2AJQ99878 128 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 DESI2Q9BSY9 194 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 H2AFJQ9BTM1 129 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 TRIM5Q9C035 493 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 TSPY26PQ9H489 355 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 CNTD2Q9H8S5 307 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 PELI2Q9HAT8 420 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 SH2D2AQ9NP31 389 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 PLSCR4Q9NRQ2 329 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 C20orf96Q9NUD7 363 aaPredicted RBP5.37□□□□□ -1.55
VPS33B-207ENST00000557470 ZNF629Q9UEG4 869 aaPredicted RBP5.37□□□□□ -1.55
VPS33B-207ENST00000557470 ADAM21Q9UKJ8 722 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 FBXO5Q9UKT4 447 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 HIF3AQ9Y2N7 669 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 CLCA3PQ9Y6N3 262 aa5.37□□□□□ -1.55
VPS33B-207ENST00000557470 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.37□□□□□ -1.55
VPS33B-207ENST00000557470 ARHGAP21Q5T5U3 1957 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 EML6Q6ZMW3 1958 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 ARID1AO14497 2285 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 SONP18583 2426 aaKnown RBP5.36□□□□□ -1.55
VPS33B-207ENST00000557470 C15orf38-AP3S2A0A0A6YYH1 394 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 MEGF11A6BM72 1044 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 SDR42E2A6NKP2 422 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 AHRRA9YTQ3 701 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 H0YHG0 523 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 GOLGA8MH3BSY2 632 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 CYR61O00622 381 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 ARHGEF9O43307 516 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 ERI3O43414 337 aaKnown RBP5.36□□□□□ -1.55
VPS33B-207ENST00000557470 COQ9O75208 318 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 LRATO95237 230 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 GOSR1O95249 250 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 GUCA1CO95843 209 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 EPPINO95925 133 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 ATP6V1B1P15313 513 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 ENPP1P22413 925 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 CERS1P27544 350 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 GABRB3P28472 473 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 TIMP3P35625 211 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 MAGEA6P43360 314 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 VPS41P49754 854 aa5.36□□□□□ -1.55
VPS33B-207ENST00000557470 PLA2G16P53816 162 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms