RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 ACTL8Q9H568 366 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 DENND2DQ9H6A0 471 aaPredicted RBP3.46□□□□□ -1.86
CHD8-212ENST00000557329 SYNCQ9H7C4 482 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 APOBEC3GQ9HC16 384 aaKnown RBP3.46□□□□□ -1.86
CHD8-212ENST00000557329 EIF2B3Q9NR50 452 aaKnown RBP3.46□□□□□ -1.86
CHD8-212ENST00000557329 BLOC1S4Q9NUP1 217 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 ADPRHL2Q9NX46 363 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 GPR83Q9NYM4 423 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 XPO7Q9UIA9 1087 aaKnown RBP3.46□□□□□ -1.86
CHD8-212ENST00000557329 VANGL2Q9ULK5 521 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 CMAHPQ9Y471 501 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 ABCA2Q9BZC7 2435 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 HIVEP1P15822 2718 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 NF1P21359 2839 aa3.46□□□□□ -1.86
CHD8-212ENST00000557329 COL27A1Q8IZC6 1860 aaPredicted RBP3.45□□□□□ -1.86
CHD8-212ENST00000557329 SPG11Q96JI7 2443 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 SHANK1Q9Y566 2161 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 LRRIQ3A6PVS8 624 aaPredicted RBP3.45□□□□□ -1.86
CHD8-212ENST00000557329 IFNL4K9M1U5 179 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 NDUFS4O43181 175 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 HLA-DRAP01903 254 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 UGT2B4P06133 528 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 H1F0P07305 194 aaKnown RBP3.45□□□□□ -1.86
CHD8-212ENST00000557329 AK4P27144 223 aaPredicted RBP3.45□□□□□ -1.86
CHD8-212ENST00000557329 PSMB10P40306 273 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 GNPDA1P46926 289 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 CAMPP49913 170 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 KCNK10P57789 538 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 NME3Q13232 169 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 ART3Q13508 389 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 ALCAMQ13740 583 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 IRF4Q15306 451 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 MED22Q15528 200 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 CEBPEQ15744 281 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 RILPL1Q5EBL4 403 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 CARD16Q5EG05 197 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 LRIF1Q5T3J3 769 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 DOK6Q6PKX4 331 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 IKBIPQ70UQ0 350 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 APLFQ8IW19 511 aaPredicted RBP3.45□□□□□ -1.86
CHD8-212ENST00000557329 RASGEF1CQ8N431 466 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 ZADH2Q8N4Q0 377 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 GBGT1Q8N5D6 347 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 ANKRD52Q8NB46 1076 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 ST6GALNAC3Q8NDV1 305 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 OR56A4Q8NGH8 313 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 HCAR2Q8TDS4 363 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 CT55Q8WUE5 264 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 UBE2Q2Q8WVN8 375 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 NRGNQ92686 78 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 MR1Q95460 341 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 CENPTQ96BT3 561 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 PERPQ96FX8 193 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 EPSTI1Q96J88 318 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 AK8Q96MA6 479 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 SERPINB11Q96P15 392 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 SMC6Q96SB8 1091 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 RUFY1Q96T51 708 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 KLF6Q99612 283 aaPredicted RBP3.45□□□□□ -1.86
CHD8-212ENST00000557329 SLC7A5P2Q9GIP4 190 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 AGPAT3Q9NRZ7 376 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 ARHGEF38Q9NXL2 777 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 ZNF624Q9P2J8 865 aaPredicted RBP3.45□□□□□ -1.86
CHD8-212ENST00000557329 STOML2Q9UJZ1 356 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 TSPAN16Q9UKR8 245 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 ACAD8Q9UKU7 415 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 CORO1CQ9ULV4 474 aaPredicted RBP3.45□□□□□ -1.86
CHD8-212ENST00000557329 SNX7Q9UNH6 387 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 JRKLQ9Y4A0 524 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.45□□□□□ -1.86
CHD8-212ENST00000557329 RTTNQ86VV8 2226 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 MDC1Q14676 2089 aaKnown RBP3.45□□□□□ -1.86
CHD8-212ENST00000557329 CCDC168Q8NDH2 2452 aa3.45□□□□□ -1.86
CHD8-212ENST00000557329 DNHD1Q96M86 4753 aa3.44□□□□□ -1.86
CHD8-212ENST00000557329 IGHV1OR21-1A0A087WYE8 117 aa3.44□□□□□ -1.86
CHD8-212ENST00000557329 PGPEP1LA6NFU8 196 aa3.44□□□□□ -1.86
CHD8-212ENST00000557329 RNF212BA8MTL3 300 aa3.44□□□□□ -1.86
CHD8-212ENST00000557329 XPO1O14980 1071 aaKnown RBP3.44□□□□□ -1.86
CHD8-212ENST00000557329 RPN1P04843 607 aaKnown RBP3.44□□□□□ -1.86
CHD8-212ENST00000557329 ALPPP05187 535 aa3.44□□□□□ -1.86
CHD8-212ENST00000557329 FGF1P05230 155 aa3.44□□□□□ -1.86
CHD8-212ENST00000557329 UQCRHP07919 91 aa3.44□□□□□ -1.86
CHD8-212ENST00000557329 IGHV4-38-2P0DP08 117 aa3.44□□□□□ -1.86
CHD8-212ENST00000557329 THRAP10827 490 aa3.44□□□□□ -1.86
CHD8-212ENST00000557329 CBLP22681 906 aa3.44□□□□□ -1.86
CHD8-212ENST00000557329 HRH2P25021 359 aa3.44□□□□□ -1.86
CHD8-212ENST00000557329 PON1P27169 355 aa3.44□□□□□ -1.86
CHD8-212ENST00000557329 OR1E1P30953 314 aa3.44□□□□□ -1.86
CHD8-212ENST00000557329 OTX2P32243 289 aa3.44□□□□□ -1.86
CHD8-212ENST00000557329 LONP1P36776 959 aaKnown RBP3.44□□□□□ -1.86
CHD8-212ENST00000557329 ACTR1BP42025 376 aa3.44□□□□□ -1.86
CHD8-212ENST00000557329 GCLMP48507 274 aa3.44□□□□□ -1.86
CHD8-212ENST00000557329 CCNHP51946 323 aaPredicted RBP3.44□□□□□ -1.86
CHD8-212ENST00000557329 AP3M2P53677 418 aa3.44□□□□□ -1.86
CHD8-212ENST00000557329 ACTR1AP61163 376 aa3.44□□□□□ -1.86
CHD8-212ENST00000557329 PPP2R2BQ00005 443 aa3.44□□□□□ -1.86
CHD8-212ENST00000557329 BST2Q10589 180 aaKnown RBP3.44□□□□□ -1.86
CHD8-212ENST00000557329 ZNF630Q2M218 657 aaPredicted RBP3.44□□□□□ -1.86
CHD8-212ENST00000557329 WSCD2Q2TBF2 565 aa3.44□□□□□ -1.86
CHD8-212ENST00000557329 ZNF876PQ49A33 203 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms