RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 FRAT2O75474 233 aaPredicted RBP4.86□□□□□ -1.63
PCNX1-205ENST00000553508 SLU7O95391 586 aaKnown RBP4.86□□□□□ -1.63
PCNX1-205ENST00000553508 UMPSP11172 480 aa4.86□□□□□ -1.63
PCNX1-205ENST00000553508 EIF2S2P20042 333 aaKnown RBP4.86□□□□□ -1.63
PCNX1-205ENST00000553508 ALDH3B1P43353 468 aa4.86□□□□□ -1.63
PCNX1-205ENST00000553508 IER3P46695 156 aa4.86□□□□□ -1.63
PCNX1-205ENST00000553508 RIPK4P57078 832 aa4.86□□□□□ -1.63
PCNX1-205ENST00000553508 WDR43Q15061 677 aaKnown RBP eCLIP4.86□□□□□ -1.63
PCNX1-205ENST00000553508 PCK2Q16822 640 aa4.86□□□□□ -1.63
PCNX1-205ENST00000553508 SLC10A5Q5PT55 438 aa4.86□□□□□ -1.63
PCNX1-205ENST00000553508 CCBE1Q6UXH8 406 aaPredicted RBP4.86□□□□□ -1.63
PCNX1-205ENST00000553508 GLRX5Q86SX6 157 aa4.86□□□□□ -1.63
PCNX1-205ENST00000553508 TICAM2Q86XR7 235 aa4.86□□□□□ -1.63
PCNX1-205ENST00000553508 CCDC71Q8IV32 467 aaPredicted RBP4.86□□□□□ -1.63
PCNX1-205ENST00000553508 DEPDC1BQ8WUY9 529 aa4.86□□□□□ -1.63
PCNX1-205ENST00000553508 FAM162AQ96A26 154 aa4.86□□□□□ -1.63
PCNX1-205ENST00000553508 CITED2Q99967 270 aaPredicted RBP4.86□□□□□ -1.63
PCNX1-205ENST00000553508 NT5DC2Q9H857 520 aa4.86□□□□□ -1.63
PCNX1-205ENST00000553508 TRMT112Q9UI30 125 aaKnown RBP4.86□□□□□ -1.63
PCNX1-205ENST00000553508 THSD7BQ9C0I4 1608 aa4.86□□□□□ -1.63
PCNX1-205ENST00000553508 DLG5Q8TDM6 1919 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 KBTBD11O94819 623 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 PIGRP01833 764 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 FHP07954 510 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 HOXB7P09629 217 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 ODC1P11926 461 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 RPS12P25398 132 aaKnown RBP4.85□□□□□ -1.63
PCNX1-205ENST00000553508 EPS15P42566 896 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 SLC3A1Q07837 685 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 ABRAXAS2Q15018 415 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 VWA2Q5GFL6 755 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 REP15Q6BDI9 236 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 NAXDQ8IW45 347 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 AQP12AQ8IXF9 295 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 SLC34A3Q8N130 599 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 C11orf42Q8N5U0 333 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 SAMD12Q8N8I0 201 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 MR1Q95460 341 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 CDHR1Q96JP9 859 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 CCDC114Q96M63 670 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 MCCC1Q96RQ3 725 aaPredicted RBP4.85□□□□□ -1.63
PCNX1-205ENST00000553508 RASL10BQ96S79 203 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 PLEKHF1Q96S99 279 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 ZNF559Q9BR84 538 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 THUMPD2Q9BTF0 503 aaKnown RBP4.85□□□□□ -1.63
PCNX1-205ENST00000553508 SRD5A3Q9H8P0 318 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 HYPKQ9NX55 129 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 ARMCX3Q9UH62 379 aaPredicted RBP4.85□□□□□ -1.63
PCNX1-205ENST00000553508 EXOC6BQ9Y2D4 811 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 SLC6A5Q9Y345 797 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 ABCC4O15439 1325 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 UMODL1Q5DID0 1318 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 ANKRD36CQ5JPF3 1778 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 PCNTO95613 3336 aa4.85□□□□□ -1.63
PCNX1-205ENST00000553508 TRPM7Q96QT4 1865 aa4.84□□□□□ -1.63
PCNX1-205ENST00000553508 DDX60Q8IY21 1712 aaKnown RBP4.84□□□□□ -1.63
PCNX1-205ENST00000553508 MAGEB16A2A368 324 aa4.84□□□□□ -1.63
PCNX1-205ENST00000553508 FOXI3A8MTJ6 420 aaPredicted RBP4.84□□□□□ -1.63
PCNX1-205ENST00000553508 DUSP11O75319 330 aaKnown RBP4.84□□□□□ -1.63
PCNX1-205ENST00000553508 OR6A2O95222 327 aa4.84□□□□□ -1.63
PCNX1-205ENST00000553508 IGHG3P01860 377 aa4.84□□□□□ -1.63
PCNX1-205ENST00000553508 HMGCLP35914 325 aa4.84□□□□□ -1.63
PCNX1-205ENST00000553508 BRCC3P46736 316 aa4.84□□□□□ -1.63
PCNX1-205ENST00000553508 PPIAP62937 165 aaKnown RBP4.84□□□□□ -1.63
PCNX1-205ENST00000553508 TRA2BP62995 288 aaKnown RBP4.84□□□□□ -1.63
PCNX1-205ENST00000553508 POU5F1Q01860 360 aaKnown RBP4.84□□□□□ -1.63
PCNX1-205ENST00000553508 LTB4RQ15722 352 aa4.84□□□□□ -1.63
PCNX1-205ENST00000553508 PRR30Q53SZ7 412 aaPredicted RBP4.84□□□□□ -1.63
PCNX1-205ENST00000553508 LINC00242Q5T6M2 205 aa4.84□□□□□ -1.63
PCNX1-205ENST00000553508 COPS6Q7L5N1 327 aa4.84□□□□□ -1.63
PCNX1-205ENST00000553508 CCDC197Q8NCU1 140 aa4.84□□□□□ -1.63
PCNX1-205ENST00000553508 DCPSQ96C86 337 aaKnown RBP4.84□□□□□ -1.63
PCNX1-205ENST00000553508 KRTAP4-4Q9BYR3 166 aa4.84□□□□□ -1.63
PCNX1-205ENST00000553508 ZCCHC17Q9NP64 241 aaKnown RBP4.84□□□□□ -1.63
PCNX1-205ENST00000553508 PLEK2Q9NYT0 353 aa4.84□□□□□ -1.63
PCNX1-205ENST00000553508 SEPT10Q9P0V9 454 aa4.84□□□□□ -1.63
PCNX1-205ENST00000553508 GTF3C4Q9UKN8 822 aa4.84□□□□□ -1.63
PCNX1-205ENST00000553508 COL4A5P29400 1685 aa4.83□□□□□ -1.64
PCNX1-205ENST00000553508 FAM168BA1KXE4 195 aa4.83□□□□□ -1.64
PCNX1-205ENST00000553508 SLC30A4O14863 429 aa4.83□□□□□ -1.64
PCNX1-205ENST00000553508 NME6O75414 186 aaPredicted RBP4.83□□□□□ -1.64
PCNX1-205ENST00000553508 RAD51DO75771 328 aa4.83□□□□□ -1.64
PCNX1-205ENST00000553508 HSP90AA1P07900 732 aaKnown RBP4.83□□□□□ -1.64
PCNX1-205ENST00000553508 SCG2P13521 617 aa4.83□□□□□ -1.64
PCNX1-205ENST00000553508 CASTP20810 708 aaKnown RBP4.83□□□□□ -1.64
PCNX1-205ENST00000553508 CHRNA3P32297 505 aa4.83□□□□□ -1.64
PCNX1-205ENST00000553508 MAGEB1P43366 347 aa4.83□□□□□ -1.64
PCNX1-205ENST00000553508 HMGCS2P54868 508 aa4.83□□□□□ -1.64
PCNX1-205ENST00000553508 SLC17A1Q14916 467 aa4.83□□□□□ -1.64
PCNX1-205ENST00000553508 LIPJQ5W064 366 aa4.83□□□□□ -1.64
PCNX1-205ENST00000553508 KRTAP11-1Q8IUC1 163 aa4.83□□□□□ -1.64
PCNX1-205ENST00000553508 ZNF444Q8N0Y2 327 aaPredicted RBP4.83□□□□□ -1.64
PCNX1-205ENST00000553508 AFAP1L1Q8TED9 768 aa4.83□□□□□ -1.64
PCNX1-205ENST00000553508 PCED1BQ96HM7 432 aa4.83□□□□□ -1.64
PCNX1-205ENST00000553508 ZMAT2Q96NC0 199 aaKnown RBP4.83□□□□□ -1.64
PCNX1-205ENST00000553508 ZIM3Q96PE6 472 aa4.83□□□□□ -1.64
PCNX1-205ENST00000553508 RANBP9Q96S59 729 aa4.83□□□□□ -1.64
PCNX1-205ENST00000553508 RSPH14Q9UHP6 348 aa4.83□□□□□ -1.64
PCNX1-205ENST00000553508 OR1A2Q9Y585 309 aa4.83□□□□□ -1.64
PCNX1-205ENST00000553508 LRRC37AA6NMS7 1700 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms